Clig010168.1
Basic Information
- Insect
- Craniophora ligustri
- Gene Symbol
- TEAD1
- Assembly
- GCA_905163465.1
- Location
- LR990960.1:12131532-12142310[-]
Transcription Factor Domain
- TF Family
- TEA
- Domain
- TEA domain
- PFAM
- PF01285
- TF Group
- Helix-turn-helix
- Description
- The TEA domain is a DNA-binding region of about 66 to 68 amino acids that has been named after the two proteins that originally defined the domain: TEF-1 and AbaA. The TEA domain is located toward the N terminus of eukaryotic transcription factors of the TEA/ATTS family. It shows a three-helix bundle with a homeodomain fold [3, 1]. Two α-helices are nearly anti-parallel and pack on either side of the third one, which is the DNA-recognition helix of the TEA domain. Phosphorylation of one or both of the two conserved serines found on the DNA-binding surface could interfere with DNA-binding activity, by introducing electrostatic repulsion and/or steric hindrance, and help regulate the transcription factor activity of the proteins [2, 1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.7e-18 9.9e-14 52.1 0.2 34 66 69 101 48 103 0.89
Sequence Information
- Coding Sequence
- ATGAAAGTTTCGTCGGCGCACGGCTTCACGTGGTCCGGGGGTGGCAGGCGAGGGACAAATGAGTTCCCTACAAACATTCTTAAAAGCGAGAGCTGTGGTAGCCTAGTGGTGTTACCAGTGGTCGGAGATGTCAAAGGTCTCGAGTTCAAAACCAAGGCACGTACCACCGACTTTTCGATAGCTATGTGCGTATTTAGCACATGCTCAAACGGACGAAATGAGCTGATAGCAAGGTATATAAAACTCAGAACAGGGAAGACGCGCACGAGAAAACAAGTGTCATCTCACATACAGGTGCTAGCTAGGCGGAAACTACGGGAAATACAGGCCAAACTCAAAGTGGATGGTGGTGTGATGAAAGAAAAGGCCATGCAGTCAATGAGCACACTGTCTAGCGCACAAATCGTTGCGGGCCTCCCACACCCAGCGTACCACCATACGGTACTAAACTTGCAAAAGCAATTTTGGCAACCGGGTTTGCAAGCTGGACCCTCACAAGACGTCAAGCCGTTCCCTGGCGCGGGCTACAAAGGAGTCCCGGGTGTAGGGGGCGTTGGTGTCCCGAGCGGGACTGACGTGGCGCCACCGCCTCCCTGGGAGGGCAGAGCCATCGCTACCCACAAGCTTCGTCTTGTGGAGTTCTCCGCCTTCGTCGAACACCCACGAGACCCTGAAACGTACCCCAGTTCGGCGCCGGCGCAGCATCTATTCGTTCATATAGGTGGTACAGTTACGTACGCAGATCCTTTATTAGAGTCAGTAGATGTACAACAGATTAATGATAAGTTCCCAGAGAAGAAGGGTGGACTCAAAGAGTTATATGAAAAGGGACCCCGAAATGCCTTCTTCCTCGTGAAGTTCTGGGCGGACCTGAACACGAATAACCTGGACGATCCGGGAGCATTCTATGGGGTCACAAGTGTATACGAAAGCAACGAGAACATGACCATAACATGTAGTACTAAAGTATGTTCGTTCGGCAAACAAGTCGTCGAGAAGGTGGAGACGGAGTACGCTCGCTTCGAGGGCGGCCGTTTCGTGTACCGCATCCACCGGTCGCCGATGTGCGAGTACATGGTCAACTTCATACACAAGCTCAAACACCTACCCGAGAAATACATGATGAACAGCGTGCTAGAGAACTTCACTATACTACAGGTGGTGTCAAACCGAGACACGCAAGAGACATTATTATGTGCCGCGTTTGTGTTTGAAGTGTCTAACAGTGAGCACGGTGCCCAGCATCACATCTACAGGCTCGTCAAAGACTGA
- Protein Sequence
- MKVSSAHGFTWSGGGRRGTNEFPTNILKSESCGSLVVLPVVGDVKGLEFKTKARTTDFSIAMCVFSTCSNGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKLREIQAKLKVDGGVMKEKAMQSMSTLSSAQIVAGLPHPAYHHTVLNLQKQFWQPGLQAGPSQDVKPFPGAGYKGVPGVGGVGVPSGTDVAPPPPWEGRAIATHKLRLVEFSAFVEHPRDPETYPSSAPAQHLFVHIGGTVTYADPLLESVDVQQINDKFPEKKGGLKELYEKGPRNAFFLVKFWADLNTNNLDDPGAFYGVTSVYESNENMTITCSTKVCSFGKQVVEKVETEYARFEGGRFVYRIHRSPMCEYMVNFIHKLKHLPEKYMMNSVLENFTILQVVSNRDTQETLLCAAFVFEVSNSEHGAQHHIYRLVKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00206049; iTF_00895923; iTF_01010338; iTF_00973764; iTF_01064645; iTF_00821808; iTF_01119314; iTF_00932534; iTF_00636385; iTF_00281313; iTF_00637634; iTF_01197705; iTF_01360597; iTF_00677598; iTF_01075423; iTF_00157184; iTF_00908826; iTF_00404904; iTF_00345790;
- 90% Identity
- iTF_00120492;
- 80% Identity
- -