Clig022712.1
Basic Information
- Insect
- Craniophora ligustri
- Gene Symbol
- dnajc2
- Assembly
- GCA_905163465.1
- Location
- LR990973.1:13170210-13173110[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.5 4.6e+03 -1.5 0.2 6 16 298 308 297 310 0.86 2 3 0.0015 2.7 8.9 0.0 3 31 434 466 434 470 0.85 3 3 2.8e-13 5.1e-10 40.0 0.2 4 44 556 600 553 602 0.91
Sequence Information
- Coding Sequence
- ATGACTAACGGCGACTCCAGTGAGAATAGCAGGGTGGTGACGATACCCTGGCCTTTTGTGAAGAGGAGGGTAGAGTGCGCTGGCGCTGCATTTCTTAGGTATCACAATATAAAGTGCCATGGTGGTGACGCGTTGTTCCAAACGCTCGAGTCCAGCGAAAAGGCCGAAGAAGTCGTCTTTGACGATGACGTTGAATACCTGAGGAGTTTGGATCCTAAAGATTGGAAGATGCAGGATCACTACGCTGTTCTAGGTATGAAGAACTTGCGTTACAAAGCCACTGATGATGACATAAAGCGGGCCTACCGGCAGAAAGTATTGAAGCACCACCCTGATAAGCGTAAAGCACAAGGTGAGGAAATACGCAGCGACGACGACTACTTCACGTGTATTACTAAGGCTTATGAAATACTGGGCACACCGGTTAAACGCAGATCATATGACTCAATAGATCCCACAATAGATGATAATGTACCAACACAGACGGACATTAAAAAAGATGGGTTCTTCAAGTCATTTACTAAACACTTTGAGTCTAATGCTCGTTGGTCAGAGAAGAGGAATGTGCCTTTATTGGGTGATGAAAATAGTACCCGGGAACAGGTTGAAAGGTTTTACGCTTTCTGGTATGAGTTTGAGTCATGGCGTGAGTTCTCTTACCTGGATGAGGAGGAGAAAGAGAGGGGAGCTGATCGGGAGGAGCGGCGTTGGATCGAAAAACAAAATAAGGCAGCAAGAGCCAAACTGAAGAAAGAGGAGATGGCTAGGATACGGAGCTTAGTAGATTTGGCATATGCCAATGACCCTAGAATCCAGCGATTCAAACAGGAAGATAAAGACAAGAAATTAGCTGCCAAAAGAGCACGTCAGGATGCAGTACAAGCCAAGAAAGCTGAGGAGGAACGCATCTTAAAGGAGGCCCTCATGGCAAAACAAAAGGCTGAAGAGGCAGAACGAGCACGCATTGAGGCCGCACGTGCAGAGCGGGAGCAGCAGAAAAAGAACCTGCGCAAAGAGAAAAAAGCACTCCGAGATCTCTGTAAAGCCAACAACTACTATTCCAGTAATGAAGAAGAAACTGTCTCCCACATGGCTGCAGTCGAAAAAATCTGTGAAATGTTGAAAGTAGTAGAAATACAAGAATTAGTAAAAAAACTAGAGAGCAATGGTAGAGATGCTTTTATCAAAACTGTCAAAGAGACAGATGATAAGCTAGAAGCAGAGAGGAAAGCTATATTTGATAACAAGAGAACAGATGAACAGAAGGCTAGAAAGGAATCTGCACTAAAACAACCAATAGAATGGAGTGTTGAAATGACACAACTACTAATCAAAGCTGTCAATCTATTCCCAGCCGGGACCAATCAGAGGTGGGAAGTGGTAGCAAATTTCTTAAATCAACATGGGACATTTACTGACGAAAGAAGGTTCGTAGCAAAGGATGTTTTGAACAAAGCTAAAGACTTGCAGAGCGCCGATTTCTCAAAGAGCAGTCTCAAAAAAGCGGCCAACGAAGAAGCATTCGACCAGTTTGAGAAAGAAAAGAAAAAAGGCTACAACCATATTGACGACAGTGGCATATCAAAGAGCGATACTCCCCCGAAAATAGTGAATGGTACAGCAACACCGAAGCCTGAGGAGGTATCCAAAATAGATGACAAGCTGTGGACAAAAACTGAACAAGAACTACTCGAACAAGCAATTAAAACGTTCCCTGTGAGCACTCCGGAGCGGTGGGAGAAAATAGCAGATTGTATACCGAATCGTACAAAAAAAGACTGCATGAAACGATACAAGGAGTTAGTCGAATTAGTTAAAGCAAAGAAGCAAGCCGCCAACCTCGCGAAATAA
- Protein Sequence
- MTNGDSSENSRVVTIPWPFVKRRVECAGAAFLRYHNIKCHGGDALFQTLESSEKAEEVVFDDDVEYLRSLDPKDWKMQDHYAVLGMKNLRYKATDDDIKRAYRQKVLKHHPDKRKAQGEEIRSDDDYFTCITKAYEILGTPVKRRSYDSIDPTIDDNVPTQTDIKKDGFFKSFTKHFESNARWSEKRNVPLLGDENSTREQVERFYAFWYEFESWREFSYLDEEEKERGADREERRWIEKQNKAARAKLKKEEMARIRSLVDLAYANDPRIQRFKQEDKDKKLAAKRARQDAVQAKKAEEERILKEALMAKQKAEEAERARIEAARAEREQQKKNLRKEKKALRDLCKANNYYSSNEEETVSHMAAVEKICEMLKVVEIQELVKKLESNGRDAFIKTVKETDDKLEAERKAIFDNKRTDEQKARKESALKQPIEWSVEMTQLLIKAVNLFPAGTNQRWEVVANFLNQHGTFTDERRFVAKDVLNKAKDLQSADFSKSSLKKAANEEAFDQFEKEKKKGYNHIDDSGISKSDTPPKIVNGTATPKPEEVSKIDDKLWTKTEQELLEQAIKTFPVSTPERWEKIADCIPNRTKKDCMKRYKELVELVKAKKQAANLAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00006232;
- 90% Identity
- iTF_01260055;
- 80% Identity
- -