Clig004803.1
Basic Information
- Insect
- Craniophora ligustri
- Gene Symbol
- kn
- Assembly
- GCA_905163465.1
- Location
- LR990963.1:5507120-5521668[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-142 1.9e-138 463.1 0.0 182 387 17 240 11 244 0.98 2 2 7.7e-09 0.00011 21.3 2.1 420 469 249 300 241 399 0.83
Sequence Information
- Coding Sequence
- ATGCGGGAACAGATGTGTGCCGCCGCGGGCGCCACAAATACGTTCGCGCAGTTTTTCTTGAAGTTCTTCCTGAAATGCAACCAGAATTGTTTGAAAAATGCCGGGAACCCTCGAGATATGAGAAGGTTTCAGGTGGTGATATCAACTCAAGTGATGGTCGACGGGCCGCTGCTAGCGATATCAGACAACATGTTTGTCCACAATAACAGCAAGCACGGCCGGAGGGCGAAGCGGCTAGACCCAAGCGAAGGTACAGACGCCGCGACAGACAATACTTCAGGTCTATATCCCCCTCTGCCGGTAGCCACACCCTGCATCAAAGCCATATCACCAAGCGAAGGCTGGACCTCTGGCGGGTCGACAGTTATCATAGTAGGTGATAACTTCTTCGACGGTCTACAGGTTGTGTTTGGAACGATGCTTGTTTGGAGTGAGTTAATAACATCGCACGCGATAAGAGTGCAGACTCCACCGCGACACATACCGGGCGTCGTGGAAGTAACACTATCCTACAAGAGTAAGCAGTTCTGTAAGGGGGCTCCGGGAAGATTTGTTTATGTTTCAGCGTTGAACGAGCCAACGATAGATTACGGCTTTCAGAGGCTACAAAAACTTATACCGAGACATCCCGGGGACCCGGAAAAATTGCCAAAGGAAATAATACTAAAGCGAGCAGCGGACTTAGCGGAGGCGTTATACTCAATGCCTCGCAATAATCAGCTAGGGCTGGGTGCGCCACGATCACCACCAGCTAGCATGCCTTTTAACTCATACACAGGACAACTTGCAGTTAGTGTCCAGGATACTGCGGCCTCGCAGTGGACTGAAGAGGAGTACGCGCGTAGCGGCGGGTCGGTATCACCACGGTACTGCTCAGCCGCGTCGACCCCACACGCCGCGCCCGCCGCCTACCCGCACCCGCAACACTACCCAGCTCCGCCGACCTCACTCTTTAATACCACGTCACTGTCTCTAGGACCATACCATCCAGCGAACATGAATGGACACTTATCATCTGACCGTCACTATAACGCGTATAATACGAAAGATAGCGGACATTACAGTGAAAGAAATGGGAATTCTAAAAGCCTGGCCGACTGTCCGGTAAACATTCATACAAAATGCACCGGCAGCGATATGAAAGGGGCTCAGAATAAAGAGACTAAGCTGAGGAGCGCCTTTGCCGTAGTGAGGCAGAGTCTGCCACGGGTTGCCAATGAGCATCATCAGAATTGGCACCACCTCGTCGTTCAATGTTAG
- Protein Sequence
- MREQMCAAAGATNTFAQFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGTDAATDNTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPAAYPHPQHYPAPPTSLFNTTSLSLGPYHPANMNGHLSSDRHYNAYNTKDSGHYSERNGNSKSLADCPVNIHTKCTGSDMKGAQNKETKLRSAFAVVRQSLPRVANEHHQNWHHLVVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00784987;
- 90% Identity
- iTF_00176893;
- 80% Identity
- -