Clig025386.1
Basic Information
- Insect
- Craniophora ligustri
- Gene Symbol
- JARID2_1
- Assembly
- GCA_905163465.1
- Location
- LR990954.1:19141207-19151178[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.6e-20 1.8e-16 61.0 0.0 10 89 598 674 590 674 0.89
Sequence Information
- Coding Sequence
- ATGATACCACGAAAAGATAGACGAATTCATACCCACTTGCAACCTGTAGTTCTTGTTGAGAGATTACGTGGTAAATCAAGTTCCACCGCAGCTCTACAGACCATTCAACACCGCAATAAGGAGAATAGTGTTATTAAACACAAACCCTTACCCCTGAAACCGCTAAATATTCGAAAGAAAAAAGACTTCAAACGCAACCATGGGATGTCTCTACGATCACGCCGGCTCAGTCAGCTGGAATTCAAGAAAATAGAAGCTGCTAGTCGCACAACAACAAGACAGGCGGCTGCAAAACGCAAAGTACCGATAGAGCCAGAAAAGATGCCAAAATCTAAGAAAAAACACATTGTCGCCCAGAAAGATCATCGTGTCGAGTCGTCTGATTTCTCCTTGGATGACAATAGACCGTTGATGTACTTTGCCAAGTGCAGCACACCAAAGGCTGCAACGGCACCGGCGACCCGCACCGCGCATCTATTTGCTTCTCTGCTCGAACCCGTAGCAGGCCCAAGCGGCATGCAAAAAATGACAGAGGTTCCTCCTGTAAGGTCTGGAACCGTCTCTAAAGGTTCTTATTATAATAGCGAGCACAACATACATCGCTGGATGAATGATTCCTTGACGCCTGAGTCCCATAGATCCGACGAGGTTGAAGGGTCTAAAACTACTGAATTTAACAAAACTGCACATTTGCCATGCCTTGCGAAAAAATGGCGAAGTGTTCAAGATGTTAATAATGCTTCAAAACAGGAGCTTGAATCGCGATGTAATAAATGCAAGCCATGCCTAAGAATTCGCAAGCTAATGAAGCTTTCCATTCTCCTTAAAACACAGGTCAACTTGGACCTAATGGGCACTGAACCTTTACCACAAAAAAGTATCACTCAGACTGAAAATGACACCAAGGGGTCTCCAGAAGCAGATCAGGGACATCTTTACTTAGATCTGCTGCCGAAACACCCGAACGTCATGATGAAGCTACGAATACATATGGTCCTCGGTAAGCAATTGCTGTCGGCTTGTTTGGTACCAAGATGCGACGCCCTTATCAACAAACAAGAGTTTTTACTGAACGAGCAGGAGCATCTGCTCGACCAACTAATTGAAACTTTAATGCTCAGTTTGAATGACAAAACGAGGGATGGCAAGGTTTCCTCAAGAACTTCAAGCTTTTCTCTTCAATATACTCCGTCTGATAATAATATTGCCTCAGAAATGGAAGCCAGAATTCGAGAGAAAGAAGCGGAAGTGTCTCGGATCGCAGCAGAAAAAGCAGCAGAGGTGTCCCGCATAGAAGCGGAAAAACAAGCTGAGGTTTCGCGAATAGAAGCCGAAAAAATAGCAGCGGTGACTCGCCTGGAAGCCGAGAAAGCGGCCGAGTTGTCACGGCTCGAATCGGTGTTAAGAACCCGTCTGCGAGCAGAAGTAGAGGCCGAAGTTCGAATGCAAGTCGAGGTTGACCAGCAAGCCAAAGCGTTGGATGCAGAGAAGGATGCTAAGGGCACAGATAAAAAGAAGGGCAATGGGTCTACCGACGATGATGAAGTAAGCGGCAATCTCTTCGAGGCACCTGTCTTCCGGCCTACCGCTGAAGAGTTTAATGATCCAATTACGTATTTCGAAAAGATCTGGTCGGAGGCCATTAAATTTGGCATCTGCAAGATTGTACCACCACCAGACTGGAAGCCAACGTCTAAGATTATGGACGATCTTCGCTTCACTGTGACGAACCAGTATATTTCGCGGCTGTTTAACCGCTGGGGACCAGCTGCGCGGGAGCTTTGCGCAATTAAGCTTTGCCTCCAGCATCAGAAGATACAGTTCAACCGTGCACCACTGCTTGACGGTATAGAAGTGAACTTGTCGAAGCTGTACCGCGTCGTCCAACGCAACGGCGGCCTCGAGTCAGTCATCAACAAGAAGAGATGGGGCAAGGTGGCCGAGGAAATGAAGTTCAACAGAACCCCAACCACTGAGAGGAAACTTGATCAGATCTACGTGAAATACCTCCTGTCCTTTGACACGCTCGGTCATCAACGCCAAGAGATAATGCGTATAGTAGAACGAGCATGGAATAGAAAGAACCAGAAACTTATGGACCGCTCTTTGAATCCGCTTCATCATCAGAAGCGTATGCTTGGCTTGTCGGACACCTCGGATGACGACTCCGAAGACGAAGACTTGGCGGTTGCCCTCAGTGAGGCTGAGGACTGCATAATCTCAGGAGCGAGCATGAACCGTGCGAAGTTCAAGAAGATTGCCAATAATACGTACGACCTCATGTTCGGCCAACGACCTGCCAGTGCCGGCCCACCAACAGAAAAAGAAATCGAAGAAGAATATTGGAACCATGTCGTTTATGGTACGGAGCATTTTTGCGTGCACAGCGCAAACATAGACACGGGTGATGAAGGCCACGGCTTCACAAGAAACAAAAATGAGCCATATGGTCGACACCCATGGAATTTAAAGATGTTCAGCCAGAACCCGAGGAACATTCTTCGCTACCTGGGCCCAGTGTTGGGAGTAACAGTGCCCACTCTTCACCTTGGCATGCTATTCTCGACTAGCTGCTGGCATAAAGACCCGCATGTGCTGCCTTGGCTAGAATTTGCGCATAATGGACCAGTCCGTATCTGGTATGGAATCCCAAGCGAGCAGACAGATAACTTCAGGAAGGCAGTAGAAACGATATCCCCGACGTTCTGCCAAAACAAAGGCCTGTGGCTGTCGTCTGACATCGCGATGATCCCGCCGCACATCTTGCGCAAGCACAACGTCTCACTCACTCGCACTACTCAGGAGAAGGGGGAGTTTATCATGACCTTCCCTAACGCCTACACCTGCTCCATCAGCACTGGCTACACTGAGTCCGAGAGCGTGTACTTCGCGCCACCCTCATGGCTTCAGAACTTACCGGATGTGTTTATGGCGGCTCGAGAAAGCTGCGAGCCTACAATGTTCTCCATGGAACGGTTCTTGTACCAAATGGGTAAAGATCAGCGTTTGGAACACAGCTTGCTGAAAGTGATCCAACCGATTTATGATAAAATGTTGCGCGATGAAGTCAATAATCGCCAAATGTTGCAAGAGCGAGGTCTCAAGTTTATACATGAGACTGCGTCCAGTGCACGGCTCAAGCGAAGAAACGCTACGTGGAATGTTCGCCAACAAGAGGAATGCGAATACTGCAGGACCTGTCTGTTCCTTTCTAAAGTAAAGGGGCTGACAACCAAAAAATCCTCATTATGCTTGGAACACACGCTTAAATTATTGGACACCGACCGCTATAAGAACAAGAACGTAGCACAACTGGAAGTGCACGTGTATGTGACTGTGAGGGAGCTCAACTCCGTCGGCGATGACATGAAGAGGCGCCTTGGCTCGTCCACCTCCTAG
- Protein Sequence
- MIPRKDRRIHTHLQPVVLVERLRGKSSSTAALQTIQHRNKENSVIKHKPLPLKPLNIRKKKDFKRNHGMSLRSRRLSQLEFKKIEAASRTTTRQAAAKRKVPIEPEKMPKSKKKHIVAQKDHRVESSDFSLDDNRPLMYFAKCSTPKAATAPATRTAHLFASLLEPVAGPSGMQKMTEVPPVRSGTVSKGSYYNSEHNIHRWMNDSLTPESHRSDEVEGSKTTEFNKTAHLPCLAKKWRSVQDVNNASKQELESRCNKCKPCLRIRKLMKLSILLKTQVNLDLMGTEPLPQKSITQTENDTKGSPEADQGHLYLDLLPKHPNVMMKLRIHMVLGKQLLSACLVPRCDALINKQEFLLNEQEHLLDQLIETLMLSLNDKTRDGKVSSRTSSFSLQYTPSDNNIASEMEARIREKEAEVSRIAAEKAAEVSRIEAEKQAEVSRIEAEKIAAVTRLEAEKAAELSRLESVLRTRLRAEVEAEVRMQVEVDQQAKALDAEKDAKGTDKKKGNGSTDDDEVSGNLFEAPVFRPTAEEFNDPITYFEKIWSEAIKFGICKIVPPPDWKPTSKIMDDLRFTVTNQYISRLFNRWGPAARELCAIKLCLQHQKIQFNRAPLLDGIEVNLSKLYRVVQRNGGLESVINKKRWGKVAEEMKFNRTPTTERKLDQIYVKYLLSFDTLGHQRQEIMRIVERAWNRKNQKLMDRSLNPLHHQKRMLGLSDTSDDDSEDEDLAVALSEAEDCIISGASMNRAKFKKIANNTYDLMFGQRPASAGPPTEKEIEEEYWNHVVYGTEHFCVHSANIDTGDEGHGFTRNKNEPYGRHPWNLKMFSQNPRNILRYLGPVLGVTVPTLHLGMLFSTSCWHKDPHVLPWLEFAHNGPVRIWYGIPSEQTDNFRKAVETISPTFCQNKGLWLSSDIAMIPPHILRKHNVSLTRTTQEKGEFIMTFPNAYTCSISTGYTESESVYFAPPSWLQNLPDVFMAARESCEPTMFSMERFLYQMGKDQRLEHSLLKVIQPIYDKMLRDEVNNRQMLQERGLKFIHETASSARLKRRNATWNVRQQEECEYCRTCLFLSKVKGLTTKKSSLCLEHTLKLLDTDRYKNKNVAQLEVHVYVTVRELNSVGDDMKRRLGSSTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -