Clig001111.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Craniophora ligustri
Gene Symbol
Arid2
Assembly
GCA_905163465.1
Location
LR990971.1:3247323-3281354[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.4e-21 1.4e-17 64.5 0.0 2 89 17 101 16 101 0.94

Sequence Information

Coding Sequence
ATGGCAAAAGCACAAATAAACACGAAATCCAGCAACTACATAAAGGACAGAGAGAGTTTTCTCAAGGATTTAAAGCAATTCAACGAAAGTAAAAATATACCGACTAAAGTGCCAATAGTGAATGGCATTGAAATAGATCTGTACCTGTTCTATACATTGGTTCAACAGCGAGGGGGACTTGGCAAGGTAAATCAGAATGACACATGGGAGTCTTTCTTGCGACCTTTGAGGCTACCACATCCTTGTATTAACGGATCAACTCTGTTGAGAAGAATATATGGAACATATTTGGAAAAGTATGAGAGAGCAAAAGGCCCACCTGGCCGAGATGATGATAATGATCTCGATGAAGACCCGCGCCGCGGCCGCGGGAGTGGAATGCCACGTATATCTACCTTTGGTGGGGGTACGTACATATCAGGTGAACCGCTACGCACCGTCCAAGGGCCACGAGTGGCGGCAGCATCGGAACGATTGGCCCTCTCGCTTTTATCGCCGATGCCCAACGAACAGGACTTCGCGGTGAATGTGTGCACCGTATTAGCGGCTGATCACTCCAACAGACTGCCACTGAGCACCACGCCGCATATACTGGACTTTTTGTTGGCGCATGCAGGCGTTTATAATCATTCGAGTCTCCGCGATACCATCGGCCGTTCATACTTCGAGGCTCGTGGACGGTACCCAGACGATTTCTGGAGTATGCGGGCAGGCGGCGGCGGGGCCAAGGAGTTAGCTGACGAGACCAAATTCATGCAGCCGGGGGTCGAACAGCCAGACCTCATAGTGCAGGCTAGGGCGGCGCATAACACGCTCACTGACTGTCTGATGAACGAAGCAGGTGAAGAGGATTTGGTGGTTGAGAAGATAGTTGAAGATGATATACTAGAAGACTGGGTCACAGAGCCGTCGGAAGAGAACCAGCTGTTCGCCCCGGAGCTGCCGGGCGGCGCGTCTTGTGTCTACACGCAGCGAGTGCTGCAGATAGCCTCCATCGTCAGGTCGCTCTCCTTCCACGAGGAGAATGTCCAGTACTTGGCTAAAAATGCTACACTCATCAGATTTCTGTTGTTGTGTGCCAACTGTTGGGTGGGCACATTACGGCAGTCGGGCCTCGACACACTCGGCAACGTATCCACAGAACTTACAATTAAGGACCCAGCCACGTGTCTGATATCTCGTCACGTGCTGTCCACGATCCAGTCGGCGCTGGTGTCGCAGGACCGGGCGCGAGTGCTGGCCGCGCTGGAGTTGCTCAACAAACTCGCGCAGAACGAAGTCAACGAAGACGCGCTACTCAAGGCGTTGGAAGCTAAGGTGTACCACGACGTGTGCGCGCTGCTGACGCTCCGCGACATAATGGTGCTGGTGTGCACGCTGGAGTGCGTGTACGCGCTGACGTCACTGGGCGACCGCGCCAGCGAGGCCGTCGCCAGGGTGCCCGGCCTCATACACACGCTCGTCTCACTTGTCACTGTCGAGGCCCAAAGCTACGGCCCTCGCGCGTGCATCCTCATGCGCGTGGTGGAGACGGTGAGCGGGCCCAGCGCGCTCGCCGCGCACGCCGAGCGGGAGGCGCACGAGCGGCAGCCGCAGACACAGATCCAGCCGGGGGTAAAGCCGGTGTCGGAGCCGCAGCAGCCAGGCGCGGTGACCCCCGCGGCGTCCTCGTCGCTGGCGCCCGTGACCCCCATACAGCAGTCGCACTTACAGCAGAGGACCGTGCAGGTGAGTGAAGCTAAGGAAAACGAGCATTTCGCTCAAGCGTGGCTGCGTTCAGCTTACGAAGTGCTGCCGGCCAACGACAACAGCGCATGCGACGCCAACGAACTCTACCGGCAGTACATGGCGTGCTGCACCAAACTCTCCAGGAAAGGAGTTATTGCGCCTGCGCACTTTCCCAGACTAGTCAGAACGGTGTTCGGCGGTACAGTGGGACCAAACACGGTGACTGTGTCTACGGGTGAAACGCAACAAGTATACATCGGCATTCGGTCCAGAGCCATACAGAACAGACCCAATCCTACAGCAGGACCAGCATCACCGATACTGAAGGCACAGTTAACGAACAAAGCAACGGCAGAGGCGAAACCAGTTGTGTCTCAAACACAAACACAGCCGACCACGACGCATCCCCATCTCTCGCAGGCTCTGGAGTCGAGTCCATCAAACACGACGCTAATCAAGCACTTGTTAGCTCATAAAGTAAGCCCCGCCCTACAGCAACCGCAAGTTGCGCAAAGACAGCAGAGCCAGCAAAGAGGTCCCGCTGCCCCAACCACAGTGGTGGTACAGACTAATCAGGTAATGGATGTTGACCCTGAAGCTCTGATCAAGTGTACCACGATAACACCGGGCGGTGTTGCCAGTAGCACTCCAACCGAAAAGAAATCAGCTCAAAACAAAATGCTGGCGGACTTGCTGAAGAAAAACTCGAACCCGCCCTTGCAAGTTGTTCAAATGGGCCCACAGATCAATGCCCCAACCATCCAAATAACGGAGACGGGTCAAATCGTTCAAGTCAAGTCTGACGCAACACCAGTCATCCAAATAAACGCTGATTCCGGCATCGTATCTCAAGGAAACCAGTACTTTCAAATAAAGAACGAACAGGGGCAACTCATTCAAATTAAGAACGAACAAGGTCAAATCATCCAGTTGAAGAGTGACCAATTGCAAGCGCCCATTCTTCAGTACAAGAATGAGCAAGGTCAATTAGTTCAGGTGAAAACCGAAGGTCAGATTCAGGTCAAAACCGAAAAGGATGTCACCGAGGCGGTGGTCGCTGATCATTCGTATACGGAGCCTCCTTCGAAGAAAATAAAGGTAGAAGAGAATATGACTCCACAAGAAAGTGTATCGAAAACTGCGGCCAATCTCTACGCAGCTCTTGCGGCCTCCGCTTTGGAAGATGAAGAGGATTTGTTGCCACCAAAACAAGAACCCATGGATGTAATCCAGCCTTCGGTATTGATGTCAGCTGCTGATAACTCCATGATCATACAGGAACCCATACTTCAGGTCCAACAACCAACGATGTCAGTTCAGCAACCTGCAATGCAAGTGCAGCAACCTACAATGCAGGTTCAACAACCCACGTTACAGGTTCAGACACCTAATTTACAGATGCCACAGCCGACCTTACAAATGCAGCAGCCGATGTTACAAGTGCAGCCCATGGATGTTCAGAACATCATCGCCTCTCAGTCTGGCCAGCTCATCCTACAAGAAAAAACAATATCGACTCAACCAACACAGTATATGCAACAACCAATGCAAATCATAGCTACTCCGAGCAATGCTCAAGGTGGCATAAGTTACATCGCCCAGAATATACCAGGGAACATGATGCAGAAGACCATTATTATCGTTCAGGGGCCGACAGGCGGAGGGCCGCTTACATTGACGAATGCACCTCAATTGACTCCAAGCCAACAACCAATAATAACCAACCAGCCGCAACCGCATAAGGCTCAGATCGTCAACCAGGGACAACCGCAACAGATCGTGGTCACTCAAAAACAACCACCGGCACTCATTAGTACGTCAAGCAGTAGCCAGATGGTGACCAACAATCCACAACTGATTCAAGGCAACCCACAACTCCTTCAAGGCAATCAACAAATCATAGCAGTTTCAAGCAACCAGTCGATCATAATGAATGCCCCTATGAAAAGCAACGTGCACAGAGTGGTGCAGCAACCACAGAGAAGCCCCGTGGTAACCAGCGTACAGAGCAACCAGGTGTCAGTCGTCAGCGAGGCGAAGACCAGCGTCATACAGACTTGTGCGAAGGGCGCGCAACAGCCAGTGATGAGACAAGTAATCACCCGGCAGCCTGTCATGGTGGGGAACACCAAGATCGGTGATAAGGAACTGGTGGTGAACCAGCCTGTTACTGAGCAAAAACCGCCAACGCCCAAGCCAGCAGCCACTCCACCGCCAGCCCCGGCGCCGGCGCCAGTGCCGCCACCAGCACAAGCCAGCAGCAGCACCACCAGTAGTCCTCAAGACGAAACGCCCTGGATCTGCCATTGGAGGGGATGTGGCAAATCGTTCGGCAACGCGTCGGACGTGTTCTCGCACGCGGCGCGCGCGCACTGCCCGGCGGCGGCGGGCGGCGAGGCGGCGTGCCTGTGGCTGGACTGCGACCGCGTGCCGCGCAAGACCTTCGCGCTGCTCAACCATCTCACCGACAAACACTGTACCGTCCACGCTCTCAAAGCAATTTACAATTCCCGTCGGCACGCGGCGGCTGAGGGGGCGGACGGCAAGCCGGTGACGCTGGGCTACCCACCGAACGCCGCGCTCGCAGCTCTCAACAAACACGCTGCCGACATGTTCAACCCGAGAGAGCTCATGGATGAGAACGAGGGTCCAGTGACGAAAAGTATTCGATTGACTGCTGCCCTTATATTGAGAAATATTGTCATATATTCCAATACGGGACGGAGACAACTCCGGTCATACGAGGCTCACCTGGCGACGATCGCGCTAAGCAGCGTGGAAGCTTCTCGAACCATCGCCCAAGTGTTATACGACATGAACAACATTTGA
Protein Sequence
MAKAQINTKSSNYIKDRESFLKDLKQFNESKNIPTKVPIVNGIEIDLYLFYTLVQQRGGLGKVNQNDTWESFLRPLRLPHPCINGSTLLRRIYGTYLEKYERAKGPPGRDDDNDLDEDPRRGRGSGMPRISTFGGGTYISGEPLRTVQGPRVAAASERLALSLLSPMPNEQDFAVNVCTVLAADHSNRLPLSTTPHILDFLLAHAGVYNHSSLRDTIGRSYFEARGRYPDDFWSMRAGGGGAKELADETKFMQPGVEQPDLIVQARAAHNTLTDCLMNEAGEEDLVVEKIVEDDILEDWVTEPSEENQLFAPELPGGASCVYTQRVLQIASIVRSLSFHEENVQYLAKNATLIRFLLLCANCWVGTLRQSGLDTLGNVSTELTIKDPATCLISRHVLSTIQSALVSQDRARVLAALELLNKLAQNEVNEDALLKALEAKVYHDVCALLTLRDIMVLVCTLECVYALTSLGDRASEAVARVPGLIHTLVSLVTVEAQSYGPRACILMRVVETVSGPSALAAHAEREAHERQPQTQIQPGVKPVSEPQQPGAVTPAASSSLAPVTPIQQSHLQQRTVQVSEAKENEHFAQAWLRSAYEVLPANDNSACDANELYRQYMACCTKLSRKGVIAPAHFPRLVRTVFGGTVGPNTVTVSTGETQQVYIGIRSRAIQNRPNPTAGPASPILKAQLTNKATAEAKPVVSQTQTQPTTTHPHLSQALESSPSNTTLIKHLLAHKVSPALQQPQVAQRQQSQQRGPAAPTTVVVQTNQVMDVDPEALIKCTTITPGGVASSTPTEKKSAQNKMLADLLKKNSNPPLQVVQMGPQINAPTIQITETGQIVQVKSDATPVIQINADSGIVSQGNQYFQIKNEQGQLIQIKNEQGQIIQLKSDQLQAPILQYKNEQGQLVQVKTEGQIQVKTEKDVTEAVVADHSYTEPPSKKIKVEENMTPQESVSKTAANLYAALAASALEDEEDLLPPKQEPMDVIQPSVLMSAADNSMIIQEPILQVQQPTMSVQQPAMQVQQPTMQVQQPTLQVQTPNLQMPQPTLQMQQPMLQVQPMDVQNIIASQSGQLILQEKTISTQPTQYMQQPMQIIATPSNAQGGISYIAQNIPGNMMQKTIIIVQGPTGGGPLTLTNAPQLTPSQQPIITNQPQPHKAQIVNQGQPQQIVVTQKQPPALISTSSSSQMVTNNPQLIQGNPQLLQGNQQIIAVSSNQSIIMNAPMKSNVHRVVQQPQRSPVVTSVQSNQVSVVSEAKTSVIQTCAKGAQQPVMRQVITRQPVMVGNTKIGDKELVVNQPVTEQKPPTPKPAATPPPAPAPAPVPPPAQASSSTTSSPQDETPWICHWRGCGKSFGNASDVFSHAARAHCPAAAGGEAACLWLDCDRVPRKTFALLNHLTDKHCTVHALKAIYNSRRHAAAEGADGKPVTLGYPPNAALAALNKHAADMFNPRELMDENEGPVTKSIRLTAALILRNIVIYSNTGRRQLRSYEAHLATIALSSVEASRTIAQVLYDMNNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00017962;
90% Identity
-
80% Identity
-