Clat004209.1
Basic Information
- Insect
- Crambus lathoniellus
- Gene Symbol
- GATA-B
- Assembly
- GCA_949710035.1
- Location
- OX453297.1:441961-444658[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-16 9.2e-13 49.3 7.5 1 34 11 43 11 45 0.97 2 2 1.5e-18 1.1e-14 55.5 5.9 1 35 80 113 80 114 0.98
Sequence Information
- Coding Sequence
- ATGGTGGAGTTTATCACGGAGGGGCGCGAGTGCGTGAACTGCGGCACTGTGCAGACGCCGCTGTGGCGGCGCGACTGCACCGGCCACTACCTTTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGGCACGCGGCGCACGCGCTGGCCGCCCCCCCACACGACGCGGGCACGAAGCGGCCGGGCACGACGTGCACCAACTGCCGCACGGTCACGACGTCGCTGTGGCGGCGCAACGCGCACGGCGAGACGGTCTGCAACGCGTGCGGCCTCTACTACAAGCTGCACGGCGTCAACCGGCCCCTCGCTATGAAGAAGGACGCTATACAGACAAGAAAACGGAAACCAAAGAACGGCATGAAGGCCGAGCGGAACATGAAGACTGCCGTGCAGCGCACGCTCTCTTCCGGCGTCAAGATGGAAAACTTACTGGATACCAGCAGCGTGGGTCGCGGTGCGCTGGGCTACTACACGGGCCACATGAAGCTGGAGGAGCCGCCGCCGGCGCACGCGCCGCTCTACGACGACGAGTACCGGCGCGCCGCCGACGACCGGCTCGACCGCCCCACCGTCGTGTCAATGGGCAGCTGA
- Protein Sequence
- MVEFITEGRECVNCGTVQTPLWRRDCTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRHAAHALAAPPHDAGTKRPGTTCTNCRTVTTSLWRRNAHGETVCNACGLYYKLHGVNRPLAMKKDAIQTRKRKPKNGMKAERNMKTAVQRTLSSGVKMENLLDTSSVGRGALGYYTGHMKLEEPPPAHAPLYDDEYRRAADDRLDRPTVVSMGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00076117;
- 90% Identity
- -
- 80% Identity
- -