Clat004217.1
Basic Information
- Insect
- Crambus lathoniellus
- Gene Symbol
- pnr
- Assembly
- GCA_949710035.1
- Location
- OX453297.1:609906-630944[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-17 7.5e-14 52.8 3.5 1 35 114 147 114 148 0.97 2 2 3.7e-18 2.6e-14 54.3 5.9 1 34 168 200 168 202 0.98
Sequence Information
- Coding Sequence
- ATGTTCGGCGGCGGCGTCGGCGGCGGCGGgtacggcggcggcggcgagtgCGGCGGCGACGGCTACGGGCTGGGCTACGTGGCGGGCGGCGGCCGGTTGCAGCAGTACGCGCACTTCGCGCCGCACCAGAACGTGTGGCACCACCATCACCACGACTCATACGGTGGCGGCGGCGTGGGCAGCGTGGGCGGCGTGGGCGTGAACGGCGTGGGCGTGGGCGTGGGCAGTGGGCTGTACTCCCAGAACGTGGTCATGGGCTCGTGGTGTGCGCCCTACGACGCTCTGCAGCGCCCTCCGGCTTATGATGGTGCGGAGCTGGACGAGGGCGCGGGCCGCGAGTGCGTCAACTGCGGCGCCAGCAACACGCCGCTGTGGCGGCGCGACGCGACCGGCCACTACCTGTGCAACGCGTGCGGCCTGTACACGCGCATCAACGGCGTCAACCGGCCGCTCGTGCGGCCCGCCAAGCGGCTGtcggcggcgcggcgccacGGGCAGTGCTGCACCAACTGCGGCTCTCGCACTACCACGCTGTGGCGGCGCAACAACGACGGCGAGCCGGTCTGCAACGCTTGCGGGCTCTACTACAAGCTGCACGGCATCAACAGGCCCCTAGCAATGAGGAAAGATGGCATTCAAACCAGGAAACGGAAGCCGAAGAAGTCTGGCAACGGGAACAAGCCCACACAAGAAGCCGCCAAGAAAGATGGCCACTCCTCACCCAGTATAGACGAAAGCAAACCCATCGTGGCGGAGGTGCCGCTGCCGCTATCATCATCAATGTCCGGCCACAGCGCGGGCAAGATGGCGCGCGAGCACGCGACGCCCGACTCCTCGCCCCACGCGCACGCGCACGGCCACGCGCACGGCCACGCGCACGGCCACGCCCACTCGCAGTACCCGCTGGGGCTGGCGTCGCCGCCGTTCCTGTCCAACCCCGCGCTCTTCAACATCAAGAGCGAGCCCAGCGCCGCGGGCGGCTATGACGGGTACACGGCGCACGCCGGCGGACACTACCACTCGCAACAACACTACCTGCACGCGTTGCACTCGCAGTACGGGCTAAGCAACGGCGAAGATGAGGAAGGCAGTGGTTTCCTCCACCAACGCAACGTGACCGCGCACGCCAAGCTCATGGCGTCCACGTAG
- Protein Sequence
- MFGGGVGGGGYGGGGECGGDGYGLGYVAGGGRLQQYAHFAPHQNVWHHHHHDSYGGGGVGSVGGVGVNGVGVGVGSGLYSQNVVMGSWCAPYDALQRPPAYDGAELDEGAGRECVNCGASNTPLWRRDATGHYLCNACGLYTRINGVNRPLVRPAKRLSAARRHGQCCTNCGSRTTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSGNGNKPTQEAAKKDGHSSPSIDESKPIVAEVPLPLSSSMSGHSAGKMAREHATPDSSPHAHAHGHAHGHAHGHAHSQYPLGLASPPFLSNPALFNIKSEPSAAGGYDGYTAHAGGHYHSQQHYLHALHSQYGLSNGEDEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00285067;
- 90% Identity
- -
- 80% Identity
- -