Clat045656.2
Basic Information
- Insect
- Crambus lathoniellus
- Gene Symbol
- slgA
- Assembly
- GCA_949710035.1
- Location
- OX453317.1:1747491-1748458[-]
Transcription Factor Domain
- TF Family
- GTF2I
- Domain
- GTF2I domain
- PFAM
- PF02946
- TF Group
- Other Alpha-Helix Group
- Description
- This region of sequence similarity is found up to six times in a variety of proteins including GTF2I. It has been suggested that this may be a DNA binding domain [2, 1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.00069 44 6.3 0.0 43 71 82 107 69 110 0.86 2 4 0.0016 1e+02 5.1 0.0 49 71 123 145 119 148 0.93 3 4 0.0016 1e+02 5.1 0.0 49 71 161 183 157 186 0.93 4 4 0.0016 1e+02 5.1 0.0 49 71 199 221 195 224 0.93
Sequence Information
- Coding Sequence
- ATGGTGGCGTCCCACAACGAGGACACGGTCCGCTACGCCATCCAGCTCATGAAGGAGCACGGCATCCGGCCCGAGGACAAGGTGGTCTGCTTCGGGCAGCTGCTCGGCATGTGCGACCACATCACCTTCCCGCTGGGTGAGTGTCCATATACACGGTCCATCCAGCTATGGAGGAGGCATCCGGCCCGAGGACAAGGTGGTCTGCTTCGGGCAGCTGCTCGGCATGTGCGACCACATCACCTTCCCGCTGGGAGGCATCCGGCCCGATACAAGGTGGTCTGCTTCGGGCAGCTGCTCGGCATGTGCGACCACATCACCTTCCCGCTGGGTGAGTGTCCATATACACGGTCCATCCAGCTATGGAGGAGGCATCCGGCCCGATACAAGGTGGTCTGCTTCGGGCAGCTGCTCGGCATGTGCGACCACATCACCTTCCCGCTGGGTGAGTGTCCATATACACGGTCCATCCAGCTATGGAGGAGGCATCCGGCCCGATACAAGGTGGTCTGCTTCGGGCAGCTGCTCGGCATGTGCGACCACATCACCTTCCCGCTGGGTGAGTGTCCATATACACGGTCCATCCAGCTATGGAGGAGGCATCCGGCCCGATACAAGGTGGTCTGCTTCGGGCAGCTGCTCGGCATGTGCGACCACATCACCTTCCCGCTGGGTGAGTGTCCATATACACGGTCCATCCAGCTATGA
- Protein Sequence
- MVASHNEDTVRYAIQLMKEHGIRPEDKVVCFGQLLGMCDHITFPLGECPYTRSIQLWRRHPARGQGGLLRAAARHVRPHHLPAGRHPARYKVVCFGQLLGMCDHITFPLGECPYTRSIQLWRRHPARYKVVCFGQLLGMCDHITFPLGECPYTRSIQLWRRHPARYKVVCFGQLLGMCDHITFPLGECPYTRSIQLWRRHPARYKVVCFGQLLGMCDHITFPLGECPYTRSIQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -