Clat045743.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Crambus lathoniellus
Gene Symbol
ct
Assembly
GCA_949710035.1
Location
OX453317.1:3632342-3640542[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.3e-32 8.2e-28 98.0 0.0 4 77 332 406 330 408 0.96
2 2 9e-31 1.2e-26 94.3 0.0 3 75 527 600 525 604 0.95

Sequence Information

Coding Sequence
ATGCCTATTGTTACTGATACGGTATCAGTTCATATAGTTGGTACGAAGGATGGGTCGACGACAGGGTTCGGCAGGCCAGAGGGGGAGGGCGACGAGAGACTCGCGCATATCCTGAACGAGGCGTCACATCTGATGAAGACACCCACGGGACAGGTCAACAACGATGACTCTAGAAGCAATGAGGACTCCAGCTCGCCACGCACTCAGTGCCCTTCGCCATTCTCTAATAAGgattCAAGTCAAAATAGAAGGCTAAAGAAATATGAAAATGATGACATTCCACAAGAGAAGGTGGTCCGCATATATCAGGAGGAGCTTGCCAAAATCATGACCAGAAGAGTGGAGGACATGCGGCACAGTCGGGACGGGTTTCCAACTGTATTTCCCCCCTTTTTCAGCGGCGGCATGCCTCCCCACATGGAGAGGCCTCCAGAGGACATCCGCATGGCGCTGGAGGCCTACCACCGGGAGCTGGCCAAGCTCCAGCCGGGCGGCAACATGCCCCCCCTGCAGCACATGCAGGGTATGCCCCCCTTCCCCAATCTCCTCGCGTTGCAGCAGCAGGCCATGCAGCAGGCGCAGAACCAACACATGAACGGCTCCGGCGCCGTCCAAGATCTCTCATTACCTAAAGATAAAAATGCCAAAATGAACGGAATGACTGATAGTGATAAGGATAGGTCAATGGATGCCGAAGAGGCTATTAGGCATGCGGGTAGCGCATTTTCATTAGTCAGACCTAAGTTAGAACCCGGTCAGCAATCGACCGGCTCCTCGGCGTCCAGTCCGTTGGGAAACGCCATTTTGCCGCCGGCGATAACGCCAAATGAGGACTTTAGCAGTTCGGCGGCGGCAAGTCCTCTGCAGAGAATGGCTTCGATAACGAACAGTCTGATATCGCAGCCGTCGAACCCGCCGCACCACCCTCCGCCTCAGAGATCGATGAAAGCGGTTCTTCCCCCGATCACACAACAACAGTTTGATCTCTTCAACAATTTGAATACTGAAGACATAGTGAGGAGGGTGAAGGAGGCTTTGAGCCAGTACTCTATCAGCCAAAGATTGTTCGGGGAGTCTGTGTTAGGGTTGTCGCAAGGGTCGGTGAGCGACTTATTAGCGCGGCCGAAGCCCTGGCACATGCTGACGCAGAAGGGCCGGGAGCCCTTCATCCGAATGAAGATGTTCCTGGAGGATGACAACGCCGTGCATAAGCTAGTGGCGTCCCAGTACAAGATCGCTCCGGAGAAGCTCATGAGGACCGGCAACTACAGCGGAGCACCCGTATGTCCGCCAAACATGAACAAGCCGATGCCGCCGACGCAGAAGATGCTATCCGACGCGACGTCGCTCCTCAGCAAGATGCAGCACGAGCAGCTGCTGGGCGGGCACCTGCCGCACCTGCAGCCGCCGCTGCTGCTCACGCCGCCCGGCTTCccgccgcaccacgccgtcaCCATCCCGCCGCACCACGATAACAACAACAAGGAACGCAAGCCGCCGCCCCCGCACCACCCGCCAGTCATGCGCAATTTGCACCAACACATCTCCCCAAGCGTCTACGAGATGGCCGCGTTGACACAGGATCTCGACACGCAAACCATCACCACCAAAATCAAAGAGGCCCTCCTCGCCAACAATATAGGCCAGAAAATATTCGGAGAAGCCGTCCTAGGCTTATCGCAGGGCTCCGTCAGCGAACTCCTCTCGAAGCCGAAACCCTGGCACATGCTCAGCATCAAGGGCCGCGAGCCGTTTATCCGGATGCAGCTGTGGCTGAGCGACGCGCACAACATCGACCGGCTGCAGGCGCTCAAGAACGAGCGGCGCGAGGCAAACAAGCGGCGGCGCTCCAGCGGGCCCGGCCAGGACAACTCGTCCGACACTTCCTCCAACGACACGTCTGAATTTTACCACTCCAGCTCGCCCGGGCCCGCCGCCGGCGCGCCCTCCGCCAAGAAGCAGCGCGTGCTCTTCTCAGAAGAGCAGAAGGAGGCGCTCCGGCTCGCGTTCGCGCTCGACCCCTACCCGAACATGCCCACGATAGAGTTCCTCGCGGCGGAGCTTGGCCTCTCGACGCGGACAATAACCAACTGGTTCCATAACCACCGCATGCGGCTGAAGCAGCAGGCGCCGCacggggcgggcgcgggcgagCCGCCGCCGCGCGAGCCCGCCGCCGCGCCCTTCGACCCGGTGCAGTTCCGCCTGCTGCTCAACCAGCGCCTGCTCGAGCTGCAGAAGGAGCGCATGGGGCTGGCGGGCGTGCCGCTGCCCTACCCGCCCTACTTCGCCGCCAACTCGAACCTGGCCGCGCTCATCGGCCGCGGGCTCGGCCCGCCCGGCGACCGGCCCAAGGACCAGAGCGGCGGGCTCGACCTGTCGATGCCGCTCAAGCGCGAGCCGGACGCCGACGATTTCGACGACGACGACGTAGAGAGCAACCTCGGCTCGGACGACTCGCTCGACgacggcgaggcgaagacgGAGCCGAAGACGGCGTCGGCGCCGTCGGGCGCCGCGCGGTCGTCGCGCCGCAAGCCCGCCGCGCCGCAGTGGGTGAACCCCGACTGGCAGGACGAGAAGGGGCGCAACCCGGACGAGGTGATCATCAACGGCGTGTGCGTGATGCGCGGCGACGACTTCCGGCGCGAGCCCGAGCAGACGGTGCGCGTGGAGCTGGAGCCGGCGGgcgcgccgtcgccgccgccggcgccgcgcgcgccgtcgccgtcgccgccgcccgccgacaTCAAGGCGGAGGCCGACGACGACCGGTGGGACTACTAG
Protein Sequence
MPIVTDTVSVHIVGTKDGSTTGFGRPEGEGDERLAHILNEASHLMKTPTGQVNNDDSRSNEDSSSPRTQCPSPFSNKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMTRRVEDMRHSRDGFPTVFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKLQPGGNMPPLQHMQGMPPFPNLLALQQQAMQQAQNQHMNGSGAVQDLSLPKDKNAKMNGMTDSDKDRSMDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNEDFSSSAAASPLQRMASITNSLISQPSNPPHHPPPQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPVCPPNMNKPMPPTQKMLSDATSLLSKMQHEQLLGGHLPHLQPPLLLTPPGFPPHHAVTIPPHHDNNNKERKPPPPHHPPVMRNLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPAAGAPSAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSTRTITNWFHNHRMRLKQQAPHGAGAGEPPPREPAAAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLGPPGDRPKDQSGGLDLSMPLKREPDADDFDDDDVESNLGSDDSLDDGEAKTEPKTASAPSGAARSSRRKPAAPQWVNPDWQDEKGRNPDEVIINGVCVMRGDDFRREPEQTVRVELEPAGAPSPPPAPRAPSPSPPPADIKAEADDDRWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01334647;
90% Identity
iTF_00006179;
80% Identity
iTF_00382458;