Clat005196.1
Basic Information
- Insect
- Crambus lathoniellus
- Gene Symbol
- tubgcp3
- Assembly
- GCA_949710035.1
- Location
- OX453297.1:15798634-15833780[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.0046 98 2.8 0.0 416 455 417 456 397 465 0.86 2 6 0.0057 1.2e+02 2.5 0.0 417 454 471 508 460 517 0.88 3 6 0.0054 1.2e+02 2.6 0.0 416 454 523 561 511 570 0.87 4 6 0.0055 1.2e+02 2.6 0.0 416 454 576 614 564 622 0.87 5 6 0.0052 1.1e+02 2.6 0.0 416 455 629 668 617 677 0.87 6 6 0.0048 1e+02 2.8 0.0 417 456 683 722 672 748 0.88
Sequence Information
- Coding Sequence
- ATGGATTTATCTTCAAGTAATTTTGCAACTTTGTTACACAAACTATGTGTGAGTTTGTCATCTGATCCAGATGGTGCCTATGAACTGGCGGTGTCATATTTATCATCAACTAGTGAGAAAACTCGAGCCAACCTAGACGAGAAACTGCTTTGTCAGAAAATTCAATCAAGACTGACCTATATGTCTTCAAGAGATGTTGATAAATTTAATGAGTGTTATACCAAATTGAAAACCTCTtttttattaaaacaacGAGTATCAGTACTTTCTCTGCTTTTGGCATTGTCAGAGACACCACATCAATCTGAATCGACGCACCAGCTATTCCCTATACCTCAGTTGGCTGCTATGTCAACTATTGGATTTTCTGGAACAGGATCAAGTTCAAGCAAAAGTACAATAGGTTCTGTAAGTTGGGGTAGTCAAGGTGCACCTAAAAACGTAGGATCCAACCAAAGCCTGCCTTCTGAAAAAAGTAATATGGCTTTAGTCTTACAGTCTAATGATCGACCGAATGACAGCAAGTGCGTTCGCGACGCTGTGTTAGCTGCGACTGGAGTGAAGACACGTGGCGTGAGCACCGCGTCGAGGCCCATGCAGACTCTCTATTCACGAATAGCTCACCTTGGCTTCCTACATGATAGGCTTAAAGAGTTCATTGACCCTAACTCAGGTCTAATGCCTCAAGGATTAATGGGTGAAGGTCTGGTTTCATCTATAAGAGATGAATTAACAGAATATTACAGAAGTGTTGCATTACTTCAATCTCAGGCTTGTGAAGGAGACGGTGGTGGTGGAACTTTACGTCGCTTGTGCGTGTGGGCTCAAGAGCCCCTGCATCGCCTCACTTGGCTCGCGAACATTGCACACACAGCACACCATAAAAAAGGCGGCGAGCTAGCGTCGTGCGTGCACCGGTTCGTGCGTCACGGCGACGAGCGAGTGGCGACTCTCGCACGGCGGCTGCTGACTGCGCTCACGTATCCGCTACTGCTGATGCTGACGCGGTGGCTATTGCACGGTGAAATTGACGATCCATTCAATGAATTTTTCATCGAAAGCAGATCGGGTGTTCCAATTGATAGAATGTGGCATGACAAGTATAGAGTAAGGGAATGGATGGTGCCATCATTCATGTCTCGCGAGCAAGCGGCCCAGATATTGGCGACGGGCAAAAGCGTTGTTTTCATGCGCGAGGCGTGCGCCGACGAGCCCGGCCCCAGCGACCACGCGCACCACCTGCACGCGATGCTCAAGGCGCACACCGGTGAGTGCGGGTTAAACACGTGGTCACTCTCCCATCTTGTAGCTACGAGTGAGGCCTTCGGCACACAAGAGCGTGTGTTCATGCGCGAGGCGTGCGCCGACGAGCCCGGCCCCAGCGACCACGCGCACCACCTGCACGCGATGCTCAAGGCGCACACCGGTGAGTGCGGGTTAAACACGTGGTCACTCTCCCATCTTGTAGCTACGAGTGAGGCCTTCGGCACACAAGAGCGTGTGTTCATGCGCGAGGCGTGCGCCGACGAGCCCGGCCCCAGCGACCACGCGCACCACCTGCACGCGATGCTCAAGGCGCACACCGGTGAGTGCGGGTTAAACACGTGGTCACTCTCCCATCTTGTAGCTACGAGTGAGGCCTTCGGCACACAAGAGCGTGTGTTCATGCGCGAGGCGTGCGCCGACGAGCCCGGCCCCAGCGACCACGCGCACCACCTGCACGCGATGCTCAAGGCGCACACCGGTGAGTGCGGGTTAAACACGTGGTCACTCTCCCATCTTGTAGCTACGAGTGAGGCCTTCGGCACACAAGAGCGTGTGTTCATGCGCGAGGCGTGCGCCGACGAGCCCGGCCCCAGCGACCACGCGCACCACCTGCACGCGATGCTCAAGGCGCACACCGGTGAGTGCGGGTTAAACACGTGGTCACTCTCCCATCTTGTAGCTACGAGTGAGGCCTTCGGCACACAAGAGCGTGTGTTCATGCGCGAGGCGTGCGCCGACGAGCCCGGCCCCAGCGACCACGCGCACCACCTGCACGCGATGCTCAAGGCGCACACCGGTGAGTGCGGGTTAAACACGTGGTCACTCTCCCATCTTGTAGCTACGAGTGAGGCCTTCGGCACACAAGAGCGTGTGTTCATGCGCGAGGCGTGCGCCGACGAGCCCGGCCCCAGCGACCACGCGCACCACCTGCACGCGATGCTCAAGGCGCACACCGATGTCACGTCGAGCACTGAAGCCGGAATAGTGAGTGGTGGCACAGCGTGGTGGGAAGCGGAAGGTCTCCGCGCGGGCGTGGCGCTGGCGCACGCGGCGGCGTCGGCGCGGCTGCTGGGCGCGCTCACCACGCACCACCACCTGCTGGACCACCTGGCCGCGCACCGCCGCTACCTGCTGCTCGCGCAGGGCGACTTCGTGCACCACCTCATGACGCTGTTGCATACGTACACGGCCCGTATACAGTCGGCGCGGCTGCTGGGCGCGCTCACCACGCACCACCACCTGCTGGACCACCTGGCCGCGCACCGCCGCTACCTGCTGCTCGCGCAGGGCGACTTCGTGCACCACCTCATGACGCTGTTGCAGTACGTACACGGCCCGTATACAGTCGGCGCGGCTGCTGGGCGCGCTCACCACGCACCACCACCTGCTGGACCACCTGGCCGCGCACCGCCGCTACCTGCTGCTCGCGCAGGGCGACTTCGTGCACCACCTCATGACGCTGTTGCATCGGCGCGGCTGCTGGGCGCGCTCACCACGCACCACCACCTGCTGGACCACCTGGCCGCGCACCGCCGCTACCTGCTGCTCGCGCAGGGCGACTTCGTGCACCACCTCATGACGCTGTTGCAGTACGTACACGGCCCGTATACAGTCGGCGCGGCTGCTGGGCGCGCTCACCACGCACCACCACCTGCTGGACCACCTGGCCGCGCACCGCCGCTACCTGCTGCTCGCGCAGGGCGACTTCGTGCACCACCTCATGACGCTGTTGCATCGGCGCGGCTGCTGGGCGCGCTCACCACGCACCACCACCTGCTGGACCACCTGGCCGCGCACCGCCGCTACCTGCTGCTCGCGCAGGGCGACTTCGTGCACCACCTCATGACGCTGTTGCAGGACGAATTAAACAAACCCGCGACGTCCCTATACGTGCACAATCTGACGTGCACGCTGGAGGCGGCGGTACGCGCCACCAACGCACAGTTCGAGCCGCCGCATGTGCTCGCCAGGCTGCACGTCAACCTGTATCCTAACTGCGACGGGCGTGACGACTGCGGCTGGGACGTGTTCGCCCTACAGTACCGCGTGGACGGGCCGCTGGGAACATTGTTCCCGGCAACGTGCGCTGCCCGCTACCGGGCGTTGTTCACGCAGCTGTGGCGCGTCAAACGCATCGAGTACGGCCTGCACGACGCCTGGCGCGAACACACTATACTGCAGAAGCGGCTCAAGTATATGCCCGGTGAGTTGGAACATTGTGCCCGCTACCGGGCGTTGTTCACGCAGCTGTGGCGCGTCAAACGGATCGAGTACGGCCTGCACGACGCCTGA
- Protein Sequence
- MDLSSSNFATLLHKLCVSLSSDPDGAYELAVSYLSSTSEKTRANLDEKLLCQKIQSRLTYMSSRDVDKFNECYTKLKTSFLLKQRVSVLSLLLALSETPHQSESTHQLFPIPQLAAMSTIGFSGTGSSSSKSTIGSVSWGSQGAPKNVGSNQSLPSEKSNMALVLQSNDRPNDSKCVRDAVLAATGVKTRGVSTASRPMQTLYSRIAHLGFLHDRLKEFIDPNSGLMPQGLMGEGLVSSIRDELTEYYRSVALLQSQACEGDGGGGTLRRLCVWAQEPLHRLTWLANIAHTAHHKKGGELASCVHRFVRHGDERVATLARRLLTALTYPLLLMLTRWLLHGEIDDPFNEFFIESRSGVPIDRMWHDKYRVREWMVPSFMSREQAAQILATGKSVVFMREACADEPGPSDHAHHLHAMLKAHTGECGLNTWSLSHLVATSEAFGTQERVFMREACADEPGPSDHAHHLHAMLKAHTGECGLNTWSLSHLVATSEAFGTQERVFMREACADEPGPSDHAHHLHAMLKAHTGECGLNTWSLSHLVATSEAFGTQERVFMREACADEPGPSDHAHHLHAMLKAHTGECGLNTWSLSHLVATSEAFGTQERVFMREACADEPGPSDHAHHLHAMLKAHTGECGLNTWSLSHLVATSEAFGTQERVFMREACADEPGPSDHAHHLHAMLKAHTGECGLNTWSLSHLVATSEAFGTQERVFMREACADEPGPSDHAHHLHAMLKAHTDVTSSTEAGIVSGGTAWWEAEGLRAGVALAHAAASARLLGALTTHHHLLDHLAAHRRYLLLAQGDFVHHLMTLLHTYTARIQSARLLGALTTHHHLLDHLAAHRRYLLLAQGDFVHHLMTLLQYVHGPYTVGAAAGRAHHAPPPAGPPGRAPPLPAARAGRLRAPPHDAVASARLLGALTTHHHLLDHLAAHRRYLLLAQGDFVHHLMTLLQYVHGPYTVGAAAGRAHHAPPPAGPPGRAPPLPAARAGRLRAPPHDAVASARLLGALTTHHHLLDHLAAHRRYLLLAQGDFVHHLMTLLQDELNKPATSLYVHNLTCTLEAAVRATNAQFEPPHVLARLHVNLYPNCDGRDDCGWDVFALQYRVDGPLGTLFPATCAARYRALFTQLWRVKRIEYGLHDAWREHTILQKRLKYMPGELEHCARYRALFTQLWRVKRIEYGLHDA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -