Clat033173.3
Basic Information
- Insect
- Crambus lathoniellus
- Gene Symbol
- jarid2b
- Assembly
- GCA_949710035.1
- Location
- OX453310.1:26176107-26185729[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.9e-17 2.9e-13 51.8 0.0 22 89 826 890 781 890 0.86 2 3 0.009 53 6.1 0.1 70 89 901 920 891 920 0.75 3 3 3.2e-08 0.00019 23.6 0.1 45 89 942 983 931 983 0.84
Sequence Information
- Coding Sequence
- ATGTCCGCAGATATGCTTCTGGATGTCATATCCTTTCAAAATTTGCACAAGCAACCCACCGAGCCCGTCGTGCTACTCAAGAGATTGGGCAAAATACAGAACCCAAAGCCTCCACCGCCGGCTGAGCCTATCAAACAAGAGTCGCCACGACAAAAACTGGTGCCCCCTACTGTTACAAACAAACCCGCGAACAAGATGAGGCTGAGGACTCGTCCTAGCTTTAAAACACaagtaataaagaaaaaagtcaaTCCTCCGTTTTTGAGGAAGAGGAAAATCCCGCCTCCGGTAACTGTTCCAGATAGCTCTGACTTAGAAGACGATCGGCCGCTCAAGTATTTCGCCAGAGCCACGGAAGTCCCGAGACGCCAACTGAGGATAAGTGCACAGGCTAAAAAAGTTAAGGCAAAGACTGGCAGAAAACAAACAAAAGTGCTACCAGCGCTCAAGAAAaTACAAAATGTAAGCAGACGAAGGGAAGCCAGTGTTAAAAAACGTCGACTGACAGTTGAAGCGAAAAACGCAAACAAGTTGAAACCTAGTGAAAATGCCGCGCTTCACTACAGCTCAGACGAAGGGCTTCCACTCCGCCGCACCTCTGATAAGCTGCCTCTACTTCGGTCTAGCTCAGATAACGTGCCTCCACTGCGCCGTAGCTCTGATAATGTGCCTCTACTGCGCCGTAGCTCTGATAATGTGCCTCTACTGCGCTccagcacagataatatacccACACTACGCTCGGACAATATGCCTCCCTTCCGCTCAAGTTCTGACGAAGAAATAGTATCACCCAAACCATTGAAAAATCGCCCACATCGTTCCAAGGTTAACtccaaaaacaaaatatctgtCGAAGGTTGGCTCGACGATGCTAAGGCAGCCACCAAGCTCCGCAAAAGCAACGGGTTCAAGATGCCTCTACGACCGAATAGGAGACGTGATGCTAAAGAGCTCGAAAGCAAGGGTGTTGTAAAAAGAAAGATTGGAGCGAGATTGCTGGAGAAGAAATTGCGAGCAAAAAAACAAACTGTTCCCACCACTGTCAACGGAAAAGGAGAGGACGCAACTAAAAAAGCAGCAAATGAGCCACCAGCACCAATTGCAGAGCCGGTTAAAGAACTAGTACCAAAGCAAAAATTGACGGAGGAGTCTCTACGAAATCACAGTGTGCCGCAATCCCACAATGTTCGCCACCACACTTCCGTAGAAGGATGGCTTGAGAGATCTGCTGAAGCAACTGCAGGAATTGTGAATTCGCCGGAGCCTGCCCTGGAAGTAGGGTTAAGAAGTCGCAGCGTCGATTCCTTATGCCCTTCGGAGCGTTTCAAATCGGTGCGAGATATCGTTGACGCTTCCGAATGCGATTTGGAAGCGGGCTGCAAACAACGCTACTGCCAGGCTTGTTGTAGGGTTAATAAACTTCGGCAGCTGAAGAATATGGTTCAGAAGAGCACTGGGCGGCCTGACGATGTGTATGAGTTTAATGATGATGTGTCAGTGGATTCTATGCGGGTTTATCGAAGACGGCCAACGTTACCGCCGCCGCCTCCCGCACCCGTTATCACTCCATTACCTGCACCCGTACCTGCCTCTTCGCCCCGCACACAAGACCCTGTCTACTTAGACATTTTACCAAACGGCAGCCATATCATCCAAATCACTAACCTCAACAAACGAAATACCATAATAAGTGCCAAAGTGATACCTAAAACCAAAGCTGAAATAAGGAACGAGTTTTCTTTGATCGAACACGAAAACTTACTAGACCAGTTGCTTACGAAATTACAGGGGGGTGAGAAGTTGGAAAATCAACAGGAAACAAAAGATGTTACTTCTCAAGGCGAAGGTAATCGCCTCGAAGATACCAGTACTCAGGCTTCGAACACGAGGAATAGACGCAGGGCCGAACCGGCGAAAGTGTTTAAGCTTTCCACCGTAAACCATACGAAGCCTATTCAGCAAATTCGACCTGAAGAGCCGAGTACATCGAAGAAAAGCGTTGAACCGCCTCCTAGAAGTGCCAGGCGAAGCGTTCCTAAGAAGAGTGAACCGACAACTAGTACCGAACAAGTCCCGAATGATAACCCTATTCCTCCGCCGACTGTTGAAGGCGGACGCTTGTTGGATGCACCCGTCTTCTACCCTACCGAAGCAGAATTTACTGATCCAATAGCATACTTCGAGAAGATATCCCCGTCAGCTGCAAAATACGGTCTCTGCAAAGTGGTACCGCCAGCGGGGTTCCGGCCGTCCTGCTCAGTGCCGGACGAGATCCGGTTCAACGTGTCGAACCAGTATATAGCGCGAATGTACCGGCGGTGGGGGCCCGCGGCCAGGGAGATGTGCGCCATCCGCGCCTACCTCGCTGAACAGAGCGTCATGTTCGCGCGCTCGCCGCTCGTCAGTACACACTACACTAGCATTACTACACCACACTACATTAAGGCGCGTgtacacgggcaattttttgACAATAGTTGCCGGTACGAAGGCATTGAAGTGAACCTACCAAAGTTATACCACATAGTCCAACGCAACGGCGGCTTGAAGAACGTGATTGAGAAGAAACGATGGGGCCGCGTGGCTGAAGAGATGAGGTACACACGGGCTCCGAATTCAGAGAAGAGGTTGGACCAACTCTACGTGAAGTATCTGCTGCCTTATGACACTTTGTCTGCCCAGCTGAAGCATACGCGGGCTCCGAACTCAGAAAAGAGGTTGGACCAACTCTACGTGAAGTATCTGCTGCCTTATGACACTTTGTCTGCCCGTGAGTACCTATATATCATTTGTCAGCTATTTAAACAGACCTTCTTCAAGAACTTAAAGAAAGTGATAGAAAAGAAACGGTGGGGCCGCGTGGCTGAAGAAATGAGATATACGCGGGCTCCGAATTCAGAGAAGAGGTTGGACCAACTCTACGTGAAGTATCTGCTGCCTTATGACACTTTGTCTGCCCAAGAGAGACAAGAAATAATGGTCGCCGTAGACCGCTGCTGGAATAAGAAGAACCAAAAGATGCTTGAAAGGGCATTGAACCCGTTACACCGGCAGAAGCGTCTTCTTGGCGAATCAGACTCTTCGAGCGATGAGGCGGAGGAAGAAGGCAACTTGGCGTGGGCGCTTGCTGAAGCTGAAGATTGTGTGGTTCCTGGACGAGCTATGACATTAGCCACGTTTAAAAAGGTAGCAGCAAACGCAATGGAGACCCTCCTCCCTAACGCCGATCAGCTGTCTCCAGAGGAAATAGAGCGCGAGTACTGGCGGCTAGTCCTGCGGGGGACGGAGCATGTGTGTGTGAACACTGCTTCAATCGACACCGGCGCCGATGGACACGGGTTCACTAAGAACAAGGCCGATCCTTACGGGAAACATCCTTGGAATTTGAAGATGTTGAGCGGCAACAGCGGCAACGTGCTCCGCTCGCTAGGGCCGGTTCTCGGCGTGACGGCGCCAACACTACACCTGGGAATGGCGCTGTCCACCAGCTGCTGGCACCGCGACCCGCACGGCCTGCCCTGGATCGAGTACATGCACTCCCGCCCGCCCAGCATATGGTACAGCTCACGTATAGTGGTCGCTACACCTGGGGATGGCGCTGTCCACCAGCTGCTGGCACCGCGACCCGCACGGCCTGCCCTGGATCGAGTACATGCACTCCCGCCCGCCCAGCATATGGTACAGCTCACGTATAGTGGTCGCTACACCTGGGGATGGCGCTGTCCACCAGCTGCTGGCACCGCGACCCGCACGGCCTGCCCTGGATCGAGTACATGCACTCCCGCCCGCCCAGCATATGGTACAGCTCACGTATAG
- Protein Sequence
- MSADMLLDVISFQNLHKQPTEPVVLLKRLGKIQNPKPPPPAEPIKQESPRQKLVPPTVTNKPANKMRLRTRPSFKTQVIKKKVNPPFLRKRKIPPPVTVPDSSDLEDDRPLKYFARATEVPRRQLRISAQAKKVKAKTGRKQTKVLPALKKIQNVSRRREASVKKRRLTVEAKNANKLKPSENAALHYSSDEGLPLRRTSDKLPLLRSSSDNVPPLRRSSDNVPLLRRSSDNVPLLRSSTDNIPTLRSDNMPPFRSSSDEEIVSPKPLKNRPHRSKVNSKNKISVEGWLDDAKAATKLRKSNGFKMPLRPNRRRDAKELESKGVVKRKIGARLLEKKLRAKKQTVPTTVNGKGEDATKKAANEPPAPIAEPVKELVPKQKLTEESLRNHSVPQSHNVRHHTSVEGWLERSAEATAGIVNSPEPALEVGLRSRSVDSLCPSERFKSVRDIVDASECDLEAGCKQRYCQACCRVNKLRQLKNMVQKSTGRPDDVYEFNDDVSVDSMRVYRRRPTLPPPPPAPVITPLPAPVPASSPRTQDPVYLDILPNGSHIIQITNLNKRNTIISAKVIPKTKAEIRNEFSLIEHENLLDQLLTKLQGGEKLENQQETKDVTSQGEGNRLEDTSTQASNTRNRRRAEPAKVFKLSTVNHTKPIQQIRPEEPSTSKKSVEPPPRSARRSVPKKSEPTTSTEQVPNDNPIPPPTVEGGRLLDAPVFYPTEAEFTDPIAYFEKISPSAAKYGLCKVVPPAGFRPSCSVPDEIRFNVSNQYIARMYRRWGPAAREMCAIRAYLAEQSVMFARSPLVSTHYTSITTPHYIKARVHGQFFDNSCRYEGIEVNLPKLYHIVQRNGGLKNVIEKKRWGRVAEEMRYTRAPNSEKRLDQLYVKYLLPYDTLSAQLKHTRAPNSEKRLDQLYVKYLLPYDTLSAREYLYIICQLFKQTFFKNLKKVIEKKRWGRVAEEMRYTRAPNSEKRLDQLYVKYLLPYDTLSAQERQEIMVAVDRCWNKKNQKMLERALNPLHRQKRLLGESDSSSDEAEEEGNLAWALAEAEDCVVPGRAMTLATFKKVAANAMETLLPNADQLSPEEIEREYWRLVLRGTEHVCVNTASIDTGADGHGFTKNKADPYGKHPWNLKMLSGNSGNVLRSLGPVLGVTAPTLHLGMALSTSCWHRDPHGLPWIEYMHSRPPSIWYSSRIVVATPGDGAVHQLLAPRPARPALDRVHALPPAQHMVQLTYSGRYTWGWRCPPAAGTATRTACPGSSTCTPARPAYGTAHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -