Clat014400.1
Basic Information
- Insect
- Crambus lathoniellus
- Gene Symbol
- Xbp1
- Assembly
- GCA_949710035.1
- Location
- OX453301.1:5183402-5184597[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7e-19 1.7e-15 58.6 6.0 2 52 43 93 43 95 0.97 2 2 0.00013 0.33 12.8 0.4 33 57 88 112 88 117 0.89
Sequence Information
- Coding Sequence
- ATGAGCGCACCGATAATCATCACCGTTCCCAGCAATTACTTGACGGTGGACGAGGACTCCCAGGGATCCATGGATGTGTCCACGCCGCCACCGTCAAGGAAGAGGAGACTGGATCACCTAACATGGGAGGAAAAAATGCAAAGAAAGAAGCTGAAGAATCGCGTGGCTGCACAGACGTCGCGCGACAGGAAGAAGGCGAAGATGGATGAGATGGAGGGTCAGATTAAGAAGTTGTTCGAGATGAACGAGCGTCTGACGAGCGAGGTTTCTAGCTTGAAAGCTTTGAACGAGCGTTTGTTGAGCGAGAACGCATCGCTTCGCAGCGAGGCGGCTGCGGCGCGGACCGTCGCGGGGGCCCGGGGACCGGCAGAGTCTACTCCTCGGCAGCAGGAGGGGCCCCCGACGGCGATCCGCGCGGCGCGCCTGTTGCTGGCGATGTGCCTGCTCTCACAGACCTCCTCGCTCACCTCGACTCAGAAGAGTACCTCGATACCCTCAATCAACTTGCAGACTCCCTCCTCAAAGAAATTGATGCAGGTGCTACAGGAGCGCCTGAAGATGTCTCAGGGCGGGTCTCTGGAGAGTGCCCTCAAGGAGTTGAAATGGTGGGGTCCACAGCAAAGCACCTGGAATCCAGTGAAGGTGCAATCGTAG
- Protein Sequence
- MSAPIIITVPSNYLTVDEDSQGSMDVSTPPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEGQIKKLFEMNERLTSEVSSLKALNERLLSENASLRSEAAAARTVAGARGPAESTPRQQEGPPTAIRAARLLLAMCLLSQTSSLTSTQKSTSIPSINLQTPSSKKLMQVLQERLKMSQGGSLESALKELKWWGPQQSTWNPVKVQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01491609;
- 90% Identity
- iTF_00284260; iTF_00035381;
- 80% Identity
- -