Basic Information

Insect: Cotesia sesamiae
Gene Symbol: -
Assembly: None
Location: scaffold:22797-35851[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0094 0.94 10.1 0.2 1 21 49 71 49 72 0.95

2 16 0.003 0.3 11.6 3.1 1 23 79 101 79 102 0.94

3 16 0.013 1.3 9.7 0.2 1 21 121 143 121 144 0.94

4 16 0.38 38 5.0 10.5 1 23 152 175 152 175 0.97

5 16 1.9 1.9e+02 2.8 2.8 1 23 205 228 205 228 0.95

6 16 0.012 1.2 9.8 0.5 1 23 279 303 279 303 0.94

7 16 0.18 18 6.0 1.9 1 23 310 333 310 333 0.93

8 16 0.0013 0.13 12.8 0.5 1 21 371 393 371 394 0.95

9 16 0.046 4.6 7.9 0.3 3 21 445 465 443 466 0.91

10 16 0.81 81 4.0 2.2 1 20 475 494 475 495 0.92

11 16 5.7 5.7e+02 1.3 0.9 1 14 591 606 591 610 0.83

12 16 0.00012 0.012 16.0 0.4 1 23 745 769 745 769 0.96

13 16 0.0068 0.68 10.5 4.4 1 23 776 799 776 799 0.97

14 16 0.32 32 5.3 1.3 1 22 841 864 841 865 0.77

15 16 2.5 2.5e+02 2.4 3.7 1 23 872 895 872 895 0.95

16 16 0.00059 0.059 13.8 1.2 1 21 917 939 917 940 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0094	0.94	10.1	0.2	1	21	49	71	49	72	0.95
2	16	0.003	0.3	11.6	3.1	1	23	79	101	79	102	0.94
3	16	0.013	1.3	9.7	0.2	1	21	121	143	121	144	0.94
4	16	0.38	38	5.0	10.5	1	23	152	175	152	175	0.97
5	16	1.9	1.9e+02	2.8	2.8	1	23	205	228	205	228	0.95
6	16	0.012	1.2	9.8	0.5	1	23	279	303	279	303	0.94
7	16	0.18	18	6.0	1.9	1	23	310	333	310	333	0.93
8	16	0.0013	0.13	12.8	0.5	1	21	371	393	371	394	0.95
9	16	0.046	4.6	7.9	0.3	3	21	445	465	443	466	0.91
10	16	0.81	81	4.0	2.2	1	20	475	494	475	495	0.92
11	16	5.7	5.7e+02	1.3	0.9	1	14	591	606	591	610	0.83
12	16	0.00012	0.012	16.0	0.4	1	23	745	769	745	769	0.96
13	16	0.0068	0.68	10.5	4.4	1	23	776	799	776	799	0.97
14	16	0.32	32	5.3	1.3	1	22	841	864	841	865	0.77
15	16	2.5	2.5e+02	2.4	3.7	1	23	872	895	872	895	0.95
16	16	0.00059	0.059	13.8	1.2	1	21	917	939	917	940	0.96

Sequence Information

Coding Sequence: ATGTTGAAAATTAGAAATAATTATTTAGAAAATTTTGCAAAATTCCACATGTCGCATTTCTTCATCGGAAAATCCCGAGGGAACCGACTTCCCCAGGAGTACAACTTCCCATCCACATCGGGATTTTCTCCGCGGGGGCAAAAGTACCGGTGCTCAAACCCTAACTGCCTAAAAGTATTTTCATGGAAAACGAGCCTAACGCGGCACATGCTGGAGTGCGACAAACGTCCGGAGTACAAGTGTCCGTACTGCGACTACAAGTCACGTGACAAGAATGACGTGAGACAGCACACGGGTTATCACCACCCGGAGCTGGAGAACTACGTGATAGAAATAAATCGCCCGTTGAAAGCGGAGATTTACATTTGCCCGAACGATAACTGCAAGCGGACTTACAAAGCCAAGCGCAGCTTGTGGGCCCACCTTAACTATGAGTGCGGAAAGGAGCCGAGCTACAAGTGCACTTTTTGCACTTACAAGACTTACTACAAGTGCAATCTTAAACATCATACCCGAAACAATCACCCGGAACAGGAGTATCGCGACAGCGTCTTTAACGATAAGAACAATCGGAACCGGCATTTTAAGCATCAATGCGGCAAACCTCATCGTTACAAATGCGCCTATTGCGAAATTTCTTCTCATTTAAAAACAAATATTAAAATTCACACGACAAAAAAGCATCCTGATATGAAAATTAACGATAATTTAAAAAGAAAAAAAAATAAAAAAAAAAAAACAAATATTTTTACAGGTGCTGGTACTGCCCCTTTAAGTCTCAATTGTGTGTGGAATAGCCGAGAAGAGACTTGCATCAGAATCGGAGAGGTTAAGTACGCCTGCTCGAACGAGAACTGCGACCGCGTGTTCTCGAACAATGAAGCAAGGTACATTCATACGAAGTACCACTGCGGAAAACCTCCCAGGTTCAAGTGCTCTCTGTGCAACTACAAGTCTTTCAAGAAGCAGAACATTCTGGCTCATGCCAAGCGCCTTCATCTTGATAATGACGCGAGGGTTATTGAGCTCTACAACGCTTCTACTTCAGGTGAGGCTTCTTTTCAGGCGACGGAAGTGATAAATATTTCGACGGTGTCCGGAGTGGGAATTTTCACCTGCCCGAATCTGAACTGCGGGCGCACTTTTAAGAACATCGCTTCCCGCAATCGGCATCTAAAGAAGATCTGCGCACAGACTCCGAACTTCAAGTGCTCCCGCTGCGATTTCAAGGCGCTGTTGAAAGAAACTGTGGAAGATCACGGGAGAAAAATGCATCGCAGGTGCAAAACTTCGGTTGTGGAACTCCTCAAGCCCGTCGCCGGGGAACTCATATGTCCGAATGAAAATTGCCAGAAAGTCTACGCTAGCAGGAAGCGGCTGGAACATCATGTGAAGTACGATTGCAAGAAGCTCCTGCCCAGATTCAAGTGCTACTACTGCCAGTATAAAGCCTTCTTTAAGAGTCAAGTCAAGAAACATGTCGTTCTCTCAATTACGGCTGATCAGTCGTCCGCTGAAATAAAAAATACAAACTATAAAGGCCCGTGGGTGGTTTTAATAAAACTCGATGAAAAAATCCTTAAATTACATGACTTGAAGAAGAAAAAATTTGCATGCACTAACCCTGCATGCATGAGCGAATTTGCGAGTAAGTGGTTGTTAGAAACTCATGTGAAAAGTGGGTGCTGGGTTCCGAATTACCAAGAACAGCAAATGCAGCAGGAATCTCAGTGGCTGAATTTTTTCCGGGAGAAGGAGCTCGAGAAGAGGTTCCCCTGCACTAATACATCCTGTTCCAAGGCTTTTAAGAATGAACATACCAGGAGAAGATTGGTTCGAGAGGAGGACCTGAAGAATATGGTGGAGCACACGGTGGAAAATCACTTTAAAAAAGTAGAAAAGAAGAAAACTTTGCAAGTCAGAAAAAAAGTTGAAAAATATTTCGCTTGCAGAAATGAAAATTGTGAAAAAGAAGAAAAAGACGGCGATCAAGAAGAAGACAATCGAATTCATTGGAACCCGCGAGTTTCGTCGAAGAAGCTGAGGGACCCTTCGTGTGCCAGAATGTTAACTGCTACCGCAGATTCATCCACCGGAGGAACTGGATCCAGCACATCAAGTTCCACTGCGGAAAGCCCCCTAGGTTCAAGTGCGGACATAAAACCACGACTTATCTGCAAAGGATTGAAGAATTTAACCGACGATAATTTTATTAAAATCGAGACTGTTAAATACGCGTGCCCTAATCCAGACTGTGACAGCGTGTTTACAGATAAGAGCAACCGCAATCGCCACTACAATTACCATTGTGGTAAGCCACCGCGATTCCAATGCCCGTACTGCAGCCACAAGTCGCACCGCAAATCTGATGTACAAGTCCACATTAATTCGCGACACCGCTTTTTCAGAAATTACGTTATCGAGCTGTACAATCCTTGCAAAAAACAATATGTTTGCGAAGCGCAAGACCCTCTGGAGTTAAAACCAGAAAATTTCCTTAGAAAAAGAAGCGAAGAGAAATTCACGTGCGTGAATCAGTCCTGTGGAAAGTCTTTTAAGACCCGCGGGGCTCGAAATTTCCACGTGCAATATCACTGCGCAAAGCCAATGCGATACAAGTGCGAACGCTGCGACTACAGGACGCACTGGAAAAACGATGTGAAGAAACACGCGAGGTCCAAACACCCGGAGCTCGAAACGAGTGTCATTGAACTCTTCAAAGTTAGATCCGCTAACAAAGTTCACAGTTACTCGTGTCCAAACGAGCATTGTAATCGCACTTACACCGCGAAAAGCAGTCTGTACAAGCACTTGAAACTTAATACACCCCCGCCGCCGTTCCCAAAAGTCAGACCTGGTAGAATACAAATGCGCGAATTTCGCGCAATGTGGAAGCATCTTCACGGACAAAAAAACACTAACGCGCCACATAAAGTACGTATGTGGTCAACCGCCGAGGTACAAGTGCAATTACTGCGAATACAAGTCCCACAACACCGCGAACGTCAAAGTCCACATGGGAAGGATGCATCCCGGTCAAAAAGTCCAGATCATTGA
Protein Sequence: MLKIRNNYLENFAKFHMSHFFIGKSRGNRLPQEYNFPSTSGFSPRGQKYRCSNPNCLKVFSWKTSLTRHMLECDKRPEYKCPYCDYKSRDKNDVRQHTGYHHPELENYVIEINRPLKAEIYICPNDNCKRTYKAKRSLWAHLNYECGKEPSYKCTFCTYKTYYKCNLKHHTRNNHPEQEYRDSVFNDKNNRNRHFKHQCGKPHRYKCAYCEISSHLKTNIKIHTTKKHPDMKINDNLKRKKNKKKKTNIFTGAGTAPLSLNCVWNSREETCIRIGEVKYACSNENCDRVFSNNEARYIHTKYHCGKPPRFKCSLCNYKSFKKQNILAHAKRLHLDNDARVIELYNASTSGEASFQATEVINISTVSGVGIFTCPNLNCGRTFKNIASRNRHLKKICAQTPNFKCSRCDFKALLKETVEDHGRKMHRRCKTSVVELLKPVAGELICPNENCQKVYASRKRLEHHVKYDCKKLLPRFKCYYCQYKAFFKSQVKKHVVLSITADQSSAEIKNTNYKGPWVVLIKLDEKILKLHDLKKKKFACTNPACMSEFASKWLLETHVKSGCWVPNYQEQQMQQESQWLNFFREKELEKRFPCTNTSCSKAFKNEHTRRRLVREEDLKNMVEHTVENHFKKVEKKKTLQVRKKVEKYFACRNENCEKEEKDGDQEEDNRIHWNPRVSSKKLRDPSCARMLTATADSSTGGTGSSTSSSTAESPLGSSADIKPRLICKGLKNLTDDNFIKIETVKYACPNPDCDSVFTDKSNRNRHYNYHCGKPPRFQCPYCSHKSHRKSDVQVHINSRHRFFRNYVIELYNPCKKQYVCEAQDPLELKPENFLRKRSEEKFTCVNQSCGKSFKTRGARNFHVQYHCAKPMRYKCERCDYRTHWKNDVKKHARSKHPELETSVIELFKVRSANKVHSYSCPNEHCNRTYTAKSSLYKHLKLNTPPPPFPKVRPGRIQMREFRAMWKHLHGQKNTNAPHKVRMWSTAEVQVQLLRIQVPQHRERQSPHGKDASRSKSPDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -