Cses000334.1
Basic Information
- Insect
- Cotesia sesamiae
- Gene Symbol
- -
- Assembly
- None
- Location
- scaffold:1861-22795[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 35 0.14 14 6.4 0.3 1 20 11 32 11 34 0.94 2 35 3.8 3.8e+02 1.9 5.2 1 23 42 65 42 65 0.92 3 35 2.1e-05 0.0021 18.4 1.4 1 23 97 121 97 121 0.96 4 35 3.1 3.1e+02 2.2 1.7 1 23 128 151 128 151 0.90 5 35 0.12 12 6.6 0.4 1 21 206 228 206 229 0.93 6 35 0.02 2 9.0 0.9 1 23 277 301 277 301 0.96 7 35 0.014 1.4 9.6 2.5 1 21 350 372 350 373 0.94 8 35 0.21 21 5.9 1.2 1 23 381 404 381 404 0.82 9 35 0.0021 0.21 12.1 3.2 1 22 447 468 447 468 0.97 10 35 7.8 7.8e+02 0.9 4.3 3 23 479 500 479 500 0.91 11 35 0.053 5.3 7.7 2.3 1 21 599 619 599 620 0.95 12 35 4.4 4.4e+02 1.7 4.5 1 21 628 648 628 656 0.72 13 35 0.0041 0.41 11.2 2.8 1 21 664 684 664 685 0.97 14 35 5.9 5.9e+02 1.3 1.1 1 20 692 711 692 713 0.80 15 35 0.0078 0.78 10.3 2.6 1 23 721 744 721 744 0.97 16 35 0.011 1.1 9.8 2.0 1 21 776 796 776 797 0.95 17 35 3.1 3.1e+02 2.2 4.3 1 23 805 828 805 828 0.83 18 35 0.0021 0.21 12.1 0.6 1 20 845 864 845 866 0.95 19 35 0.019 1.9 9.1 0.6 1 23 871 894 871 894 0.97 20 35 0.039 3.9 8.1 0.2 2 23 933 954 932 954 0.96 21 35 0.00092 0.092 13.2 0.1 2 23 962 984 961 984 0.97 22 35 2.6 2.6e+02 2.4 1.0 1 14 1026 1039 1026 1040 0.85 23 35 0.26 26 5.5 0.5 4 21 1117 1134 1117 1135 0.90 24 35 8.6 8.6e+02 0.8 0.8 1 8 1143 1150 1143 1154 0.87 25 35 0.0015 0.15 12.6 0.1 3 21 1192 1210 1191 1211 0.95 26 35 0.0044 0.44 11.1 0.9 1 23 1219 1242 1219 1242 0.97 27 35 0.23 23 5.7 5.7 1 21 1275 1295 1275 1296 0.96 28 35 0.0065 0.65 10.6 9.4 1 23 1304 1327 1304 1327 0.97 29 35 0.016 1.6 9.4 0.8 1 23 1374 1397 1374 1397 0.97 30 35 7.6e-05 0.0075 16.7 3.2 1 21 1436 1456 1436 1457 0.96 31 35 0.028 2.8 8.6 0.6 1 22 1465 1486 1465 1486 0.96 32 35 0.015 1.5 9.4 0.4 1 21 1518 1538 1518 1539 0.89 33 35 1.3 1.3e+02 3.4 3.2 1 23 1547 1570 1547 1570 0.96 34 35 0.0016 0.16 12.5 0.4 3 21 1607 1625 1606 1626 0.96 35 35 0.012 1.2 9.7 0.9 1 23 1634 1657 1634 1657 0.96
Sequence Information
- Coding Sequence
- ATGTACAACCCCTTCGCGAACGCCAGGAGGTACTCCTGCCCCCAAGAAGGCTGCTACAAGAGGTACAAGTACAGACAGGGCCTCGCTTATCACCTCAGCAATGAGTGTGGAAAGTCTCCTAGGTTCAAGTGCTTTTACTGCTCCTATCACGCTTATCATAAGGGAAATATTCAGAAACACTCTGCGGTTAAACATCCTAATTTTGAGGCCTGTGTTGTTGACTTGAAATACCGGCGGTTCTCCTTGCCTGTAGTCTCGTCAGTGCAGAGGAGTTCGAAGACCTTGAAGTTCGCGTGTCCAAACCGGGACTGCAACCGCGTCTTCAAAGAGCAGCGGTACCTGAGGAAGCACATGAACTACCACTGCGGGAAGCCTCCCAGGTACAAGTGTCCCTTCTGCGAGTACCGCTCCATCTGGAAGTACGGCGTCAAGTCCCACATGGAGCACAACCACTCCGGTCAAAATGCCCGTATTATCGAAATGTACAAGCTCTCCTCCAAGAGTTTGAGCCCAAGAAAAAAGAAGCCAATAAAGCCAATAAAGCAAGAAACCATCGACCTGGAAGATCACCAAGAAGCAGCCCCTCCCGAAGACGTAGAAATCGAGTCCGAGAAGTACCAGTGCCCCAATGAGAACTGCTTGACCGTATTTACCCGCAGAGCGGCCCTGACATTCCACATCAAGCATCAGTGCATCACCCCGCGATTCCGATGTTCCGCGTGCGATTACCGCTCGAAAAGCCGCCGGGACCCCACTTACTCAGTCTACATGGCCCCGGGAAATGTAATCGAATTCCCTAAGGAACCTTTGCAAGTGAAAGGAAGAAAGTACGCATGCCCGAACCCGAACTGTTCCAGCGTGTTCAAGGAGCGGCGCCATCTAGGAACCCACATCAGGTACCACTGCGGAAAACCACCGAGGTACAAGTGCTTCTATTGTCCTTACAAATCCACCTGGAGAGGTGGAAGAGCAGCCTCAGGCATCATATTAAGAATCGATTTCGACTACAACGCGCTGCTGTTCTCAAAAGACGGTGAGCCTGCAAAGTACTACTGCCCAACGGCGAACTGCAAGAGGTCCTTCAAGCACAAGAACCAGCTGCAGTTCCACCTTCGGAACCAGTGCGGGAAACCCCCCAGGTACAAATGTCCCTACTGCGGGTACCAGTCCCAGTGGAAGCAGCATGCCCGCGTCCACATCCAGCGCGTCCACCCTGAACAGCTTCCCGAGATTTTTCAGAACTCCTGCAGCCAAAGTACCACTGTCCGAACTGCACGAGCAGAATTTCTGACCCGCCGGGACGGCTGGTTTAACTATTGCCCATGGACCGAGAAGCCGTATCAATGTCGGGGTTGCTGTTACAGCTACTCGACGAAGGACTTGCTAAAACGGCACATCCGTCGAGCCTGCGGGGGCAAAGAGCCGCGGGTCGGGTGTCCTTATTGTTCTTACAAGTCGCGGTACAATTCCGACGTGTACAAGCACTGCAAGCGGAAGCATTCTTCCGCCGCGGTCTTCGCGATAGACTTAGAAACACTCCAGCGCGTATCTTCACATGCAGTCGATGAGTTGAGTTGCCGGGCCCCGGATCGTCATACCAGCAGCAGTCGCATTCAAAAAGCCAAACAGAAAAAAAGTTCCAGTGTCCAAAATGCAATAAAAGATTTTCTCAAAGTTACTCAATGTACCGGCACTATAGATACGAGTGCGACTCGCAGCCGCGGTACCAGTGCCCGTACTGTCGGGTACTCCTATCGGTGGTCGCACAAAAAGGACGACAGAAAAATACCGAAATTTAATTGCCCGAGGTGCCTGAGGCGGTTCTTTTCCCACAGCGGGATGAACCGACACTACCGGCTGGAGTGTGGAGACGTTCCTAGGTTTAAGTGTCCTTACTGCGAGATGAGGACTAAGTACACACAGGCGGTCTACAGGCATAGCTGCATGATGAGGCACTACCAGTCACACTGCGGGGTTCACGAAACGCGCTTTCGGTGTACTTATTGCGATTACGGATCGAAGTACAGTTCTAATATTTACAAGCACATGCGACATTCCGCGACAAAAAAGTCTTTCTTTTGCCCGAAATGCAACAGCGGATTTACCTTAGAAGCGAATATGAATTTTCACTACCGACATTTGTGTGGTCAGGAACCGCGATATAGATGTCCGTATTGTACCCTAAAGACCAAACGAACTTATAATATTTATAGACACATAGACCGTTATCACTTTGGTTTCGACTTTGAGGGCCAGAAATTCCCGAGACTCGTGGCTTACGCGGAAGAAGACCGCGAGGACGCCTGGTACCCGGGGAAGATGGCGTACCACTGCCCCAGGTGTAACGCGGGGTACACCTACAAGAAGACTCTCAAGACCCATCTGAAATACGACTGCGGGAAGGAACCCAGGTTCAAGTGTCCCTACTGTAACAAGAAGGACAAGTGCTCATCGAATATTTACAAACATGTTCGGCTCAGGCACGACGGGCTGCCTGTTACAACCAGAAGATGGTCAACAGGAGTCTCAAGTTACGTATGTGGAAAATGCAACGCGGGATTTCGGACCTCGTGGTACCTGATAAGACATAAATGCGGCCAGGCGATGAAATTCGCGTGTCCTTACTGTCTAAAAAAAGACAATTCGTCCTCAAATGTGTACAGACATATCCGCCGCTGGCATCCTATGTCTCCGGTTGTTGTCAATAAATTTAATTTTATGATTAATTATTTTATTTATTTAATTAACTCGATAATTTTTCTGATTGCAGATCTTAAGCCGAACTTGAGCCCGCTCAAGTGTTTACAGTGCAGGAGTGAATTCAAAGGCCCAGATGAGCTTCTGGATCATATAAAGTATCACTGCGCCGCGCCTTTGAGCATTCAGTGCCCGTATTGCGATTCGCGGTTCCGATATGTTCCCAATGTTGAGTTGCATATCAGAACTCAGCACCGCGGGATGCCGTCTAAAAATGCAGGAAATTTTCGGCACCAGTGCCAGAAGTGTTATCGCAGTTACAAACACCGGTGCCACATGATTCGCCACTGCAAATACGAGTGCGGAATCCCCCAAAGATTCGAGTGTCCTTATTGCAAACATCACTTGCGCCAGCGGACTCACGATTCCAATTTGAGGGTGACAAAGTACCGAAAAATCGCGTGGGAGTCTATCAGTGTCCAAACTGCGGAAATTTCTACAAGTGGAAAAATTCTCTCCTCGCTCACTTTAGGAATTACTGCCGAAAACAACCGCGTTACAGATTTCTACGGAGTGAACGTGGTACCTTACATAGGGCCTTACCAGGAGATAAACTTCGGATTCGGCCCGAAAAAAGAGATCTTCTCCTTCCCAAAATGCCTCCGCGGGTTCAGCCGCAAAAGCAACCGAAACCGGCACTTTAAATACGAATGTGGACATGAGCCAAGGTTCAAGTGTCCTTACTGCGAAGAGCAAACAGACTTCGAGGGTTTATCTTCATATTTGCGAGAAACATCGAGGGGAAAGAACCCCCTGGAGCCGGACGAGAATTCAGAAGTTCCTAACCAACCTTCCAGTAGAAAATTAGTAGCCATCTGTCCAAATTGCCAGAAGGGCTACCAGCGCGCGGCGTCTCTGAGACGACACTTGAAATACGAGTGCGGACAAACGCCAAAGTTCAAGTGTCCTTATTGCGATTTGCGCACCAAGCAAGCGTCGCCTATTTACACCCACGTTAGGAGAAAACACCCCGGCTTGCCTTTTAAGACGGCCTGGAGCGCCGTTTTCGAAGACACTAAGCCCTTTCCTAATCCAAACACCACGGCGGAAAGAGAGATTAGTTTATTTACTTGCAAAAGTTGTTTTAAGAGTTACCACTACTACCAATCGTTGAAGCGGCACTTGAAGTTCGAATGCGGAATGAAGCCCGGGTTCAAGTGTCCGTACTGTGAATACTGTAGCAAGCACAAGTCTTCGCTTTATAATCACATTAAGCACAAACATCCTGGCCAAGAAATTGCACATATTTTATCTGTCAAGGCCGACAAATTTATTTTACGAAGAGCGAAATGCTTCAAGTCTTACTTGTACTTAAAAACCCTAAACCGGCATTTGAAGTACGAGTGCGGACATAAACCGAGATTCAAGTGCCCTTACTGCGACCTACAGACCAAAAGAACTTCACCTATATACATTCACATCAGGAACAAACACCCCGGACAAATGGGGGCAAACAATGGGACGGGGATGGAAATGCCAGTAGCAGACTTCACGCCGTATGAGCAGCTGCAACCCCAAAGAGGTCGTAGACGGTCCCTTTATAAAAATCACGTTTGCCCGAAGTGCTATCGCAGTTACAAACGCGGTAGCCATTTAAATCGACACATGCGATTCGAGTGTGGACAGAGCGCGAGGTTCAGGTGTCCCTACTGCGATTTTTTGAGCAAACAGTCGCCGAATATTTATAAGCACATTAGAAAGAGCTCATCTTGGGACCAACAAGCAACCCCTCCAGTATCATTAGTGCAATCAAAACGCGCCAGAAGAAAACAAGACCACCTGAATGCACAATATTACGCCTGTATCACGTGTTTTAAGAAGTACACACGAAACGCGGATCTAATGAGACATGTGCGTAACGAGTGCGGTCAATCCCCGCCCTTTAGGTGTCCTCACTGTATGTACAAAAGCAAGCAATTTTCTAAAATTTATGCCCATATCCGAGCCAAACATCCGGGGAAATCTAAAGGCTACATCGATTTGAGAAATAATGCTCACCTTGGAATCAACAAGCGACCTCAAGAAAGAAAACAAGACCACCTGAAAGTAAAACTCCACGGCTGTCCTAGGTGCCTTAGGAAGTACAAGCGAAATGCGGATCTAAAAAGACATATGCTTAACGAGTGTGGTCAATCCCCGCGCTTCAAATGTCCCTACTGTCCCAATAGAAGCAAGCAGTTTTCTCAAATTTACGTCCATATTCGCGCCAAACATCCCGGACAAATTAGGGGATACGTTGACTTGAAAACTAATAACCGAAGAAAGAGTAGCAGTTCGTCCGCGAATTCTTAG
- Protein Sequence
- MYNPFANARRYSCPQEGCYKRYKYRQGLAYHLSNECGKSPRFKCFYCSYHAYHKGNIQKHSAVKHPNFEACVVDLKYRRFSLPVVSSVQRSSKTLKFACPNRDCNRVFKEQRYLRKHMNYHCGKPPRYKCPFCEYRSIWKYGVKSHMEHNHSGQNARIIEMYKLSSKSLSPRKKKPIKPIKQETIDLEDHQEAAPPEDVEIESEKYQCPNENCLTVFTRRAALTFHIKHQCITPRFRCSACDYRSKSRRDPTYSVYMAPGNVIEFPKEPLQVKGRKYACPNPNCSSVFKERRHLGTHIRYHCGKPPRYKCFYCPYKSTWRGGRAASGIILRIDFDYNALLFSKDGEPAKYYCPTANCKRSFKHKNQLQFHLRNQCGKPPRYKCPYCGYQSQWKQHARVHIQRVHPEQLPEIFQNSCSQSTTVRTARAEFLTRRDGWFNYCPWTEKPYQCRGCCYSYSTKDLLKRHIRRACGGKEPRVGCPYCSYKSRYNSDVYKHCKRKHSSAAVFAIDLETLQRVSSHAVDELSCRAPDRHTSSSRIQKAKQKKSSSVQNAIKDFLKVTQCTGTIDTSATRSRGTSARTVGYSYRWSHKKDDRKIPKFNCPRCLRRFFSHSGMNRHYRLECGDVPRFKCPYCEMRTKYTQAVYRHSCMMRHYQSHCGVHETRFRCTYCDYGSKYSSNIYKHMRHSATKKSFFCPKCNSGFTLEANMNFHYRHLCGQEPRYRCPYCTLKTKRTYNIYRHIDRYHFGFDFEGQKFPRLVAYAEEDREDAWYPGKMAYHCPRCNAGYTYKKTLKTHLKYDCGKEPRFKCPYCNKKDKCSSNIYKHVRLRHDGLPVTTRRWSTGVSSYVCGKCNAGFRTSWYLIRHKCGQAMKFACPYCLKKDNSSSNVYRHIRRWHPMSPVVVNKFNFMINYFIYLINSIIFLIADLKPNLSPLKCLQCRSEFKGPDELLDHIKYHCAAPLSIQCPYCDSRFRYVPNVELHIRTQHRGMPSKNAGNFRHQCQKCYRSYKHRCHMIRHCKYECGIPQRFECPYCKHHLRQRTHDSNLRVTKYRKIAWESISVQTAEISTSGKILSSLTLGITAENNRVTDFYGVNVVPYIGPYQEINFGFGPKKEIFSFPKCLRGFSRKSNRNRHFKYECGHEPRFKCPYCEEQTDFEGLSSYLRETSRGKNPLEPDENSEVPNQPSSRKLVAICPNCQKGYQRAASLRRHLKYECGQTPKFKCPYCDLRTKQASPIYTHVRRKHPGLPFKTAWSAVFEDTKPFPNPNTTAEREISLFTCKSCFKSYHYYQSLKRHLKFECGMKPGFKCPYCEYCSKHKSSLYNHIKHKHPGQEIAHILSVKADKFILRRAKCFKSYLYLKTLNRHLKYECGHKPRFKCPYCDLQTKRTSPIYIHIRNKHPGQMGANNGTGMEMPVADFTPYEQLQPQRGRRRSLYKNHVCPKCYRSYKRGSHLNRHMRFECGQSARFRCPYCDFLSKQSPNIYKHIRKSSSWDQQATPPVSLVQSKRARRKQDHLNAQYYACITCFKKYTRNADLMRHVRNECGQSPPFRCPHCMYKSKQFSKIYAHIRAKHPGKSKGYIDLRNNAHLGINKRPQERKQDHLKVKLHGCPRCLRKYKRNADLKRHMLNECGQSPRFKCPYCPNRSKQFSQIYVHIRAKHPGQIRGYVDLKTNNRRKSSSSSANS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -