Basic Information

Insect: Cotesia sesamiae
Gene Symbol: -
Assembly: None
Location: scaffold:37568-42790[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.061 6.1 7.5 3.0 2 20 219 237 218 239 0.93

2 11 0.035 3.5 8.3 1.9 2 23 246 268 239 268 0.85

3 11 1.5e-07 1.5e-05 25.2 1.0 2 23 307 328 306 328 0.97

4 11 0.0076 0.76 10.4 0.5 1 23 333 356 333 356 0.87

5 11 0.17 17 6.1 1.9 2 23 425 446 425 446 0.97

6 11 0.00028 0.028 14.9 1.6 1 21 455 475 455 478 0.89

7 11 2.6e-06 0.00026 21.3 0.4 1 23 486 508 486 508 0.97

8 11 0.0072 0.72 10.4 1.1 1 21 514 534 514 535 0.95

9 11 0.00031 0.031 14.7 0.2 2 23 572 593 571 593 0.97

10 11 0.068 6.8 7.4 0.0 1 23 643 666 643 666 0.97

11 11 7.9e-06 0.00079 19.7 3.2 1 22 671 692 671 692 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.061	6.1	7.5	3.0	2	20	219	237	218	239	0.93
2	11	0.035	3.5	8.3	1.9	2	23	246	268	239	268	0.85
3	11	1.5e-07	1.5e-05	25.2	1.0	2	23	307	328	306	328	0.97
4	11	0.0076	0.76	10.4	0.5	1	23	333	356	333	356	0.87
5	11	0.17	17	6.1	1.9	2	23	425	446	425	446	0.97
6	11	0.00028	0.028	14.9	1.6	1	21	455	475	455	478	0.89
7	11	2.6e-06	0.00026	21.3	0.4	1	23	486	508	486	508	0.97
8	11	0.0072	0.72	10.4	1.1	1	21	514	534	514	535	0.95
9	11	0.00031	0.031	14.7	0.2	2	23	572	593	571	593	0.97
10	11	0.068	6.8	7.4	0.0	1	23	643	666	643	666	0.97
11	11	7.9e-06	0.00079	19.7	3.2	1	22	671	692	671	692	0.97

Sequence Information

Coding Sequence: ATGGCCCCATTGGACTGGAGCGGTTCCTGCCGCTTGTGCTCAGAAAAAAAGACCGAAATGTTCGAGATATTCGGTGAAGAAGGTATTCGCAGACGTGTTGCTCAGAAATTGCGCGTTTGCCTGCCTGTAATGGTGTACAAAAGTGACCCGCTTCCCAAAAAAATCTGCCAGTTTTGCGCTGCCAGGCTGGATGATGTCTACGAGTTCAGAGAATATTGCCTGAGTGTCTACAAGAACATGCATTTTAAATTGCTGGCTAGCAAGAATCTCACTGCGGTCAAGATGTTCCTGGATGCTATGTCTGCTTCTCCTGACCCTTGCCAGGTCAGGCTCTGCATGATAAAGCAACGCGCTCCACCGCCGTTAGTTCCATTGCCGGCAAAATTCGCTCCAGTAAGGGAGAAAGAAGCGGAACCCATGGTCGAGCTACTCTGTGAAGTTCAGATAAAAGAAGAACCAGCTGATGCTGATCTAGATAAACTGGATTTCGAGTCTGGGGTTGGAGATAGTGACCATAGCTTAGCTGACGCGAGCACTGTTGGAGAAAATGGATGCCTTGATGAAAAGCAGACTAGTATTTTGGAGCGGGTGCTCAAAGGGGACCTGACTGTTAATGATTGCAAGGATGTGTCACCGAAGAGTAACTCTCAGTTGTGTTGCTCGATGTGTAATAGTTATTGCAAGACCAAAGAGAGTTTAATGAAACACATGGAATTTGAATGTCCTAAAAAACCCGAATGTGGAAAATGTTTAATAATATTCAGGACTTTTGATGAATTAACACGACACGAAGAATTGTGTCACAGAGATAAAAATGAAATCAAATCAGAACCCTATCAGAAAATTCATGACTTGATGCAGAACCACGTAAATTTCGACGCAGTGAAACGAGAACCAAATGATGGAATCAAAAGTCTTGTTTGTCCTACATGTGGAAAGATTTGTACTCAGCAAAGCGCGTTGTCGAACCATATGCGGACACACGAACCGAAAAAACACAAGTGTGATATCTGTGGGAGATCCTTTGGCTTATTTATAAGATTAGCAGCTCATAAACTAAGTGAACATAACCAGCAACCACCTATGAAACCGGAAATTAGTACTATTGAGCAAGAAGAAGCGCTGAATGATGAGAGAGAGGCGAGAGAAAGGGAAGTCAGAACTAAAGATCGCTGTCGAACTTTTTCTGAGACTTTGGATAAGGATGAACTTGATGAAGAGAGACCAGCAAAGCGTACGTCATTGAGTACAAATGTTAATAAAAATGTCGCGCGGTGTGGAATTTGTCAACAATGGTTCAATGATCATACGACAATGCTAAATCATCTTCAAACACATTCGGACAATTTAAACATTAAGAATTTTAATTGCAGTAGTTGCAAAAAAACTTTCAGGGAAAAATGGCAATTACAAAGGCATGAGGTATTGTCTCATAAACGTGCTAAGGTTGTCACCTATGACTGTTCAGTCTGCAACAAACCATTCACAGAAAAATCCCAATTGGAGAATCATGAAAAAATTCACGTAGTAGATAGAACATATCGCTGTGCGAAGTGTGATAAAATTTTCTTTAAAGAACTTTCACTTATTACTCATCAATGTGCCAGAGTGCCTAAGTTTGGAAAGAATAATTCGCCTAGTAAATTACTTACGACCAAGGAGTCTTCATCAACTGCTCCAACAATCTCACCCGGCAACCAAATTAAGAAATTGAAATGTCCTAAGTGTCCGGCGACCTTTGATACCTCGCAGTTGAGAAATTTACATATCAGAATACACATCGAGCCTAAGGTGCAAAATACTGATGATGTAAAACCGATGCCTAAGTTGAAACCAGAGTCCTCTTTTTCAGAGCCTGATGACAAGCCTGAAGAACAAAATTACACTGTGCCATTAAAGAGAACACTTATCAGAACTTCTGGAGGATATCGTTGTGGAGTTTGTCAATCACCGTTCGTCCTACGAGACTTGGCAGTAGCTCATCTGAGATCAGCGCATCCGATGATGCCTTACCAGTGTCCTTACTGCAAGCAACGTTTCACTACTCAGTACGAATTCAGTCACCATATTAAAACAAAATTTTGA
Protein Sequence: MAPLDWSGSCRLCSEKKTEMFEIFGEEGIRRRVAQKLRVCLPVMVYKSDPLPKKICQFCAARLDDVYEFREYCLSVYKNMHFKLLASKNLTAVKMFLDAMSASPDPCQVRLCMIKQRAPPPLVPLPAKFAPVREKEAEPMVELLCEVQIKEEPADADLDKLDFESGVGDSDHSLADASTVGENGCLDEKQTSILERVLKGDLTVNDCKDVSPKSNSQLCCSMCNSYCKTKESLMKHMEFECPKKPECGKCLIIFRTFDELTRHEELCHRDKNEIKSEPYQKIHDLMQNHVNFDAVKREPNDGIKSLVCPTCGKICTQQSALSNHMRTHEPKKHKCDICGRSFGLFIRLAAHKLSEHNQQPPMKPEISTIEQEEALNDEREAREREVRTKDRCRTFSETLDKDELDEERPAKRTSLSTNVNKNVARCGICQQWFNDHTTMLNHLQTHSDNLNIKNFNCSSCKKTFREKWQLQRHEVLSHKRAKVVTYDCSVCNKPFTEKSQLENHEKIHVVDRTYRCAKCDKIFFKELSLITHQCARVPKFGKNNSPSKLLTTKESSSTAPTISPGNQIKKLKCPKCPATFDTSQLRNLHIRIHIEPKVQNTDDVKPMPKLKPESSFSEPDDKPEEQNYTVPLKRTLIRTSGGYRCGVCQSPFVLRDLAVAHLRSAHPMMPYQCPYCKQRFTTQYEFSHHIKTKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00379844;
90% Identity: iTF_00380608;
80% Identity: -