Cses011971.1
Basic Information
- Insect
- Cotesia sesamiae
- Gene Symbol
- -
- Assembly
- None
- Location
- scaffold:33629-46519[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 33 0.0001 0.01 16.2 1.0 1 21 24 45 24 46 0.95 2 33 1.5e-05 0.0015 18.9 3.8 1 23 54 77 54 77 0.98 3 33 0.12 12 6.6 2.6 1 21 134 154 134 155 0.95 4 33 0.0095 0.95 10.1 2.9 1 23 162 185 162 185 0.97 5 33 0.045 4.5 7.9 0.4 1 21 207 229 207 230 0.94 6 33 0.035 3.5 8.3 0.4 1 23 238 261 238 261 0.97 7 33 0.17 17 6.2 3.1 1 23 304 327 304 327 0.95 8 33 0.02 1.9 9.1 0.8 1 23 373 397 373 397 0.97 9 33 0.0046 0.46 11.0 0.6 1 22 446 469 446 469 0.88 10 33 0.16 16 6.2 3.9 1 23 476 499 476 499 0.96 11 33 0.026 2.6 8.7 0.2 3 21 513 533 511 534 0.90 12 33 8.4 8.4e+02 0.8 0.5 1 23 542 565 542 565 0.76 13 33 0.0022 0.21 12.1 1.9 1 21 599 621 599 622 0.95 14 33 8.5 8.5e+02 0.8 2.2 1 23 630 653 630 653 0.87 15 33 0.025 2.5 8.7 0.1 1 20 694 715 694 717 0.94 16 33 0.014 1.4 9.5 0.2 1 21 728 750 728 751 0.95 17 33 0.93 92 3.8 4.4 1 23 759 782 759 782 0.96 18 33 0.0027 0.27 11.8 2.0 1 21 802 824 802 825 0.96 19 33 0.77 77 4.1 3.5 1 21 833 853 833 856 0.95 20 33 1.2e-05 0.0012 19.2 0.1 1 21 903 925 903 926 0.97 21 33 0.0074 0.73 10.4 0.5 1 23 934 956 934 956 0.98 22 33 0.0085 0.85 10.2 0.4 1 21 1030 1052 1030 1053 0.95 23 33 1.6 1.6e+02 3.1 0.3 1 19 1061 1079 1061 1080 0.87 24 33 0.003 0.3 11.7 0.3 1 21 1215 1237 1215 1238 0.95 25 33 7.8 7.8e+02 0.9 2.9 1 23 1246 1269 1246 1269 0.86 26 33 0.034 3.4 8.3 0.9 1 23 1286 1309 1286 1309 0.94 27 33 0.24 24 5.6 3.1 1 22 1356 1379 1356 1379 0.93 28 33 0.046 4.6 7.9 0.2 1 21 1386 1406 1386 1407 0.95 29 33 0.00021 0.021 15.3 2.5 1 21 1425 1447 1425 1448 0.95 30 33 0.086 8.6 7.1 0.6 1 23 1456 1479 1456 1479 0.95 31 33 0.00055 0.055 14.0 0.9 1 23 1510 1534 1510 1534 0.98 32 33 0.33 33 5.2 1.8 1 23 1541 1564 1541 1564 0.97 33 33 1.9 1.9e+02 2.8 1.2 1 20 1612 1631 1612 1635 0.85
Sequence Information
- Coding Sequence
- ATGGATTTTCTGAACGAGGTTGGCGAGCCAGTAAGGTACGAGTGCCTGGATAACGCGCCGACCAAAAAATTCGTCTGTCCAAATTTGTGCGGGAGCTCCTTTAGTCATAATTACAGTCTGACCAGGCACTTGAAGTACGAGTGTGGTCAGGAACCACGGTTCAAGTGTCCCTACTGCGATTTGCACTACAAGCGCACTTCCAATGTCACCCAGCATATCAGGACTAGGCATATCAACTGCACCACTTATGCCATCGATATTATTGATAACAAGATTTTCAAATTCTGGGATTTTTTGTTACCCAGCTCGCTCTTGACCCTGGATTACGCCGACGAGAACTCGAGCTCCGAAGAACTGAAGCCTTTTCCAGACCAAAAATTTGTGATGATAAAAAATAAATACCACTGTCAAAGTTGTCCAAGAATTTTTAACTCCGAGTGCTCGGTGAAGCGGCACCTCAAGGAGTGTGGGATTGAGCCGCGGTACCAGTGCGCTTACTGCCAGTACACGGGAAAAAGAAAGTTCCAAATAACGCGGCACACTAAAATAAAACATAAAAACCAAAACTTGAAAATAATTGATTTGTTTATAAAAAATATGAGCGCGTTGATGGGAAATTTTAGCTGTCCTAATCCGAGTTGCGGCAAAAATTTCAAGTGGAAAAAAAATTTGGCGTATCATCTGAAGTACCAGTGCGAGAAACCGCCGCGCTACAAGTGTCCGTACTGCGAGTATGCGTCAAAATGGCGCAAAGACGTCGAGCGCCATGTTCAGACAATGCATCCAATAGAAGAAGTTAAAGTTATTGAAATTGGAAAAGCGAAAGAAGAAATAAAATTCGAGAGCACTTACGCGAATCAGTACCGGTTAAGGTTTCACATGAAACACGAGTGCGGGAAACCGCCCAGATATTTGTGCGTCTACTGTAATTATAAGTCTGTATATAAACACGATGTGCAGAAACACGCACGAAGAAAACATCCTAATGGGGATAATAACGCTGTTATTGAGTTGTATAATACTACGGGGAAACACAGGAGATTCGACTCGGGATTCTTCATGATGCACGAGACTTTTGGGCAGCTGGACTCCAGTGATAACTCCAGGTCCCAGAAGTACCCGTGTCCGAACCCGAATTGCTCGAGCGTGTTCAAGGAAAAGCGGCATTTAGGAACTCACATAAATTACCACTGCGGAAAGCCTCCCAGGTTTCAGTGTCCTTATTGCGAGTACATGTCTCACATGAAGTGCAACGTGAAGACTCACTGCAAGAAGCGACATTCTGACCAAGAGATCTGGGTCGTCGAGCGCTACAACTCAAGGATGCTTGGAAACTTTCCTTGTTTGAACGTCAGCTGCGGTAGCGCTTTTAAGGACGAGTTTCATCTGAAGAAACACATGAAGACCTGCGGAGCTCCGCCGAGGTTCAAGTGCCCGTACTGCGATCATTGCTCCAAGTGGAGTTTTGACATGCGAAAACATGTTCAAGTTATTCATCCTGGAAGCGAAGTTATTTATATTGATCAAACACTTTTTTGTCCAAATCCGAATTGCAAGCGAACTTTTTCAAATCTCATGAATATGAATGAACATGTTAAAATTGAGTGCAGTGGACCGACAAGGTACAAGTGCTCTAAATGCACCTTCCAGTCTATAACAATGAACCCTATGGTTATGCACATCAGTGTGTTCCACTCCGACTGGCAAAGTCCTCAAGCAACCCCAAAGCAGGTTCCTCGGAAATTACAACTAGAAAGCGGAGACGACTGTGTGATGACAATGGACGCTGTAGAGTTCCACTGCCCGAACAAGAACTGCACAAAAGTGTTCAACTGGCGCAGCAATTTAACCCGCCACATGAAGTACGAGTGCGGAAAATCGCCGCGCTTTAGATGCTCGCGCTGCGAGTACCAGTCGCCATTTAAGCAGCACGTGTTGCGCCACGCAAGTGCGAAACATCCTAATCAGCTGACAGAAGCAATCAATCAGCAGCAGAACCTGCCGAACAATCAACCGGTTCCCCAACCGGATCCAAGATTGGTTCCGCCGGAACTGATAAAGCCGGAACCTCCTGGCCAGTTCGTCTGTTCCAATCTGGACTGCAACGCCGCCTTTTCCAATCTTTACGCGCTGAACTATCACACGAGTCTTGGAACAGGAGCTGCGCATGCGCAAGACATGTTCCCCTGCCCGAACACAAACTGCGCACGCGTATTCAAGTGGCGCAGCAATTTGACCAAGCACATAAACTTTGAGTGCGGAAAACCACCGAGATTCATGTGTTCCAAGTGTTACTACCGTTCGCCGAGGAAACACGACGTTCTAAAGCACACCTCAAAGCAACACCCGAACGAAGTGGTCGCTCTGGTCGAGTTATACAAGCCGGACAAGGCTAGAGGCCAGTTCCAGTGCCCGAACCTCAACTGCGGGAGCACTTTTAAGAAGCAGTACAGTTTAACTTACCATCTGAAGCACTTCTGCGACAAGCCTCCCAGATTCAAGTGTCCCTACTGCTATCACGTCGGGAAGCTATCCACGAACATCAAGCAGCATATCCGGTGCATTCACCCTGGAAAAAAGTTCCAAGAACCAGGATTTGAAGTTCCGGCGCTAGGTGGCGTTGGAACGTGTGGAACTACTTTTGGAGAGTGCGTAGGCCCTCTAGAAACAGAGTCAGAGAAGAACGACAACCCGCGCTACTGGAAGTACGAGTGCCCGAACGTGAACTGCAGCGAGGTGTTCCGGACCAAGGCGAGCCTGACCAGGCACATGCGCAATACCTGCGGCAAGGCTGTGAACTTCGAGTGTCCGTACTGCGACTACTTATCCCCTGTGCGGCGACTGTTCATCCGCCACCTGAAGCGCCACGACCGACAGCAGCGCCCCGGCCCTCTGAGCAGAGACCGCACTTCGGGTCTGACCAAGAGACCGGGTCGCCCACCGAAGCATCGGCTGGTTCCGGAGCCTGTTTTCGAACGGGCAGAACCCGCGGAACCCCAGTCCAGTTCCTCCGGTTCCTCCAAGGGTCCCGAGGTTCCTGGAACCGAAGAGGAACTGCAGAAGGACCCGCGCAAAAAACTACGCTACTACGCTTGTCCTAATACCGATTGCTCCGGAAAATTCAGCAGCAAAAATGATCTTACTCAGCACTATCGCTTCAAGTGCGGAAAACCTCCGCGGTTCCGCTGCCCCTACTGCGAGTTCCGCGCTAAAACTGGGTTCGATGTCAGGCGCCATGCTTGGTGGAGCGAGACAGGAGGTACCAGTGCCCGAACAACAACTGCAGCAGTGTTTTTAAGCAGTACAGGAATTTCGTCACTCATCTTAATTACCAATGTGGCAAGCCGCCGAGGTACAAGTGTTGTCCCTATTGCTCTCAAGAAGCGAAAGAAAATTCATCCGCACTCTCAAGTTTTTGTTGTTGATAAATATTACGATGCTTGCAAGTCTAAGTTTGGGGAAAATTTTGAGGAAAATTTGGGTGAAAATTATTTGGAAAATTCACTGGGAAATTTTTGCTCTAGATGCGCCTTTTACGCCTGGGAAACTTCAGTCATAGTTCGACACGCGAACACAATCCACTTGCACGAAGAAACTTTAGTGATCGACCAGTGGAACCAGTTCGCAAACACCGTGAAAAGGTTCACATGTCCCAACAAAAATTGTTCCAGCGTCTATAATTCACAATCCGAGTTAAACCGCCATATTAACAATTACTGCGGAAAGCCGCCTAAATTCAAGTGTCCGTTTTGCCCCTATCAGTCAAAATGGAGCAAAAATACCCGGCGACATGTTCATGCAAAGCATTCTGAAATGAATTGTCACTTAGGGTGTGTTTGCAACCAGCCGCCGCGTTACAAGTGTTCTTTGTGTAATTACGACACAAGCAATATAAGCAACGTCCGATCGCACGCGTACCGGATGCACAAGAACCAGGAGGCGATGATAGTCGAGCTTTGGAACGCTTCGACCCGAAAAAATGAAAAGTACACTTGTTCCCCTAATAAGAGCCTTTCTTTTGCAGTGCCTTCTCCAAAAAGCTCCTCAGAAGATCGGAACATCTTGTTCCACTGCTCGAACTCCTATTGCGCATGCGTATTCCGAACCCGGCGACTTTTGAGTATGCACATGAGTACCTGCCGACAACCTTCGAAGTACAAGTGCCCGGACTGCCTGTTCCAGACTCCTACTAGGGTTGGTCTTGAGAGACACACCAAGTACTGCAATCCTGTGAGAAAATTAACAGAAAAATCTAATACTGCCGCCGCTGTTTATTCTTGCACGAATAAAAATTGCGGGAAGACTTACTCGAACCACTACGAGTTAAATCGACATCTTAAGTTTGTTTGTGGTAAACCTCCGAGGTTTAAATGTCCCTATTGCGAGTATATGTCCAAGTGGTCCGCGGATATTAAAAAACATTTGAAAAATCTTCACACTGGACAGATGTGTATAACATTTCGTAATTTCGTGCCTCAGCGATTGAAAAAAGGCGCCTCCCGTCGAGCAAAGCCCGGAGCTCCAAAGTACCAATGCCCAAATTTGAATTGCAATAGTGCCTTTAGCCTGTACTACAATTTACGAAGCCACATGATGTATCACTGTGGCAAACCACCGAGGTACAAATGTTTCTACTGCACCTACATGTCAAAATGGGCCGCAGACGTGAAGAAACACCAGAAAAAACTCCACCCAGAACAAGAAGTTTCTGGAACGAAGAAATACATAATCTGTTGCCTTGGCTGCGACAAGACTTGCGCAGATCTAAATATCCCTGTCCGAACTCGAACTGCAAAAAGCCACGTTGTTAATCACTGTGGAAAGCCCCCGAGGTTCAAATGCGCCCATTGCGACTACCAAACAACGTGGCGGAAAGACGTCAAGAGACACGCGGTTAATATTCATCGAGACGCCATTACGCCGGTCGTTGAATTGTACAAAATTTTCTCCAAGAAGAAATGTCACAAAGAAATTTGGAAAGGTTCTCATGCCCAAACCCGAACTGCAAAAGTGTCTTTAAAAGCCAGAGGTACTTAA
- Protein Sequence
- MDFLNEVGEPVRYECLDNAPTKKFVCPNLCGSSFSHNYSLTRHLKYECGQEPRFKCPYCDLHYKRTSNVTQHIRTRHINCTTYAIDIIDNKIFKFWDFLLPSSLLTLDYADENSSSEELKPFPDQKFVMIKNKYHCQSCPRIFNSECSVKRHLKECGIEPRYQCAYCQYTGKRKFQITRHTKIKHKNQNLKIIDLFIKNMSALMGNFSCPNPSCGKNFKWKKNLAYHLKYQCEKPPRYKCPYCEYASKWRKDVERHVQTMHPIEEVKVIEIGKAKEEIKFESTYANQYRLRFHMKHECGKPPRYLCVYCNYKSVYKHDVQKHARRKHPNGDNNAVIELYNTTGKHRRFDSGFFMMHETFGQLDSSDNSRSQKYPCPNPNCSSVFKEKRHLGTHINYHCGKPPRFQCPYCEYMSHMKCNVKTHCKKRHSDQEIWVVERYNSRMLGNFPCLNVSCGSAFKDEFHLKKHMKTCGAPPRFKCPYCDHCSKWSFDMRKHVQVIHPGSEVIYIDQTLFCPNPNCKRTFSNLMNMNEHVKIECSGPTRYKCSKCTFQSITMNPMVMHISVFHSDWQSPQATPKQVPRKLQLESGDDCVMTMDAVEFHCPNKNCTKVFNWRSNLTRHMKYECGKSPRFRCSRCEYQSPFKQHVLRHASAKHPNQLTEAINQQQNLPNNQPVPQPDPRLVPPELIKPEPPGQFVCSNLDCNAAFSNLYALNYHTSLGTGAAHAQDMFPCPNTNCARVFKWRSNLTKHINFECGKPPRFMCSKCYYRSPRKHDVLKHTSKQHPNEVVALVELYKPDKARGQFQCPNLNCGSTFKKQYSLTYHLKHFCDKPPRFKCPYCYHVGKLSTNIKQHIRCIHPGKKFQEPGFEVPALGGVGTCGTTFGECVGPLETESEKNDNPRYWKYECPNVNCSEVFRTKASLTRHMRNTCGKAVNFECPYCDYLSPVRRLFIRHLKRHDRQQRPGPLSRDRTSGLTKRPGRPPKHRLVPEPVFERAEPAEPQSSSSGSSKGPEVPGTEEELQKDPRKKLRYYACPNTDCSGKFSSKNDLTQHYRFKCGKPPRFRCPYCEFRAKTGFDVRRHAWWSETGGTSARTTTAAVFLSSTGISSLILITNVASRRGTSVVPIALKKRKKIHPHSQVFVVDKYYDACKSKFGENFEENLGENYLENSLGNFCSRCAFYAWETSVIVRHANTIHLHEETLVIDQWNQFANTVKRFTCPNKNCSSVYNSQSELNRHINNYCGKPPKFKCPFCPYQSKWSKNTRRHVHAKHSEMNCHLGCVCNQPPRYKCSLCNYDTSNISNVRSHAYRMHKNQEAMIVELWNASTRKNEKYTCSPNKSLSFAVPSPKSSSEDRNILFHCSNSYCACVFRTRRLLSMHMSTCRQPSKYKCPDCLFQTPTRVGLERHTKYCNPVRKLTEKSNTAAAVYSCTNKNCGKTYSNHYELNRHLKFVCGKPPRFKCPYCEYMSKWSADIKKHLKNLHTGQMCITFRNFVPQRLKKGASRRAKPGAPKYQCPNLNCNSAFSLYYNLRSHMMYHCGKPPRYKCFYCTYMSKWAADVKKHQKKLHPEQEVSGTKKYIICCLGCDKTCADLNIPVRTRTAKSHVVNHCGKPPRFKCAHCDYQTTWRKDVKRHAVNIHRDAITPVVELYKIFSKKKCHKEIWKGSHAQTRTAKVSLKARGT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -