Cses006115.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cotesia sesamiae
Gene Symbol
-
Assembly
None
Location
scaffold:37559-57377[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 31 0.84 83 3.9 0.9 2 15 267 280 266 283 0.85
2 31 0.0094 0.94 10.1 0.8 1 23 294 316 294 316 0.99
3 31 0.25 25 5.6 4.9 1 23 322 345 322 345 0.95
4 31 0.044 4.3 8.0 0.4 2 23 355 376 354 376 0.93
5 31 0.0023 0.23 12.0 1.2 1 23 382 404 382 404 0.98
6 31 5.3e-05 0.0053 17.1 0.1 1 20 410 429 410 431 0.93
7 31 0.0013 0.13 12.8 3.7 1 23 574 597 574 597 0.97
8 31 3.4 3.4e+02 2.0 0.7 2 23 678 702 677 702 0.82
9 31 0.081 8 7.1 0.5 1 23 750 772 750 772 0.94
10 31 2.4 2.4e+02 2.5 0.4 1 15 780 794 780 797 0.92
11 31 5.5e-05 0.0055 17.1 3.0 2 23 810 831 810 831 0.98
12 31 2.9e-05 0.0029 18.0 3.3 1 23 1104 1126 1104 1126 0.98
13 31 0.026 2.6 8.7 5.0 1 23 1168 1191 1168 1191 0.98
14 31 0.002 0.2 12.2 1.0 1 23 1197 1219 1197 1219 0.97
15 31 0.08 8 7.1 1.4 1 23 1225 1247 1225 1247 0.98
16 31 0.11 11 6.8 2.1 1 23 1252 1275 1252 1275 0.92
17 31 0.028 2.8 8.6 2.4 2 23 1285 1306 1285 1306 0.98
18 31 0.0018 0.18 12.3 0.3 1 21 1342 1362 1342 1363 0.93
19 31 0.0001 0.01 16.2 1.0 1 23 1615 1637 1615 1637 0.96
20 31 0.024 2.4 8.8 8.0 1 23 1644 1666 1644 1666 0.98
21 31 8.3 8.3e+02 0.8 1.0 1 10 1672 1681 1672 1682 0.92
22 31 0.0069 0.69 10.5 4.2 1 23 1686 1708 1686 1708 0.98
23 31 6.2e-05 0.0062 16.9 0.9 1 23 1714 1736 1714 1736 0.98
24 31 2.3e-05 0.0023 18.3 0.5 2 23 1742 1763 1742 1763 0.97
25 31 4.5e-05 0.0045 17.4 2.9 1 23 1769 1791 1769 1791 0.98
26 31 0.00015 0.015 15.7 3.7 1 23 1797 1819 1797 1819 0.98
27 31 0.14 14 6.4 7.9 1 23 1825 1847 1825 1847 0.98
28 31 0.0078 0.78 10.3 2.7 1 23 1853 1875 1853 1875 0.97
29 31 0.081 8.1 7.1 2.0 1 23 1881 1903 1881 1904 0.95
30 31 8e-05 0.008 16.6 4.1 1 23 1912 1934 1912 1934 0.98
31 31 0.00062 0.062 13.8 1.8 1 23 1968 1991 1968 1991 0.97

Sequence Information

Coding Sequence
ATGACGACGCATCAAATGGAGATGGAAAATTTTATAACTGGTGACTTAACTCAAGACGATCAAGATTTTGTTTCGCAAGAGTTGGATGACAATTCAAATATTGAAAAAAAAGTTTCAATAAGTGAAATGAAGAATGAGATTGATTGTCCTTCAGAAATTGCAGCCCAGAAAATGGACATGCTGAAGAATTGCATGGCTTTAAATCGCATTACAATAAGAAGCATTCAGACATTAAATGCTGGAGATTTTAATTTAGGTCATCGCAGTTTTCAAAGCCTGGTTTCATCTACTAGTGCTAGTAAGAATAATATTCGAACAAATACTCTTACTAATTCTAGTGATGAAGCTTTATTGCCAGAAGAAAGTAAAGATGACATAAAACTCCAAGAAAACCTGAGTATGACAACTGAAAAAAAATTTTTTAACAAACAAGACAGAGAAAATGTTAATGATAATAATTTAAACCCTGATTCCCATTGCGGCAAAGAGCTGTTTGTTGTAGTTTTAAATGATGGTACTGGAGCGGCAGTTGTGCAAGTTAGTGATGAAGATACTAAAAAACATCAAACTAATTGCGAAAATTCTTTGCATGAAGATACTGATTTTGAAAATTTGTTTGAGCCAAATGACGTTAAAAATGTCTGTGACTTGAAAGAAATAAGAAAAAGTCGTGTCGTAGCGAAAAAACCTAAAGATGAATTATGGAAACCGCCGGCTCAGATTGAAAAAAGTTTCAAAGAAAATAAGGAGTCAAAATCATCTCAAGTACAAAAAAATTATTTTTCTAAGAATAGTTGTAATTGCAAAGAATGTGATCGTGAATTCGATTACTCATCCGCAGTAAATTTGCGCCTCGAAAAAAGTACTGGTGAGCGTTTTTATAAGTGTCCTAGATGCAATTTTGTGAGTTATTATTTGGCAAGTATTAAAAATCATATACGTTCGCACACTGGAGCTAAGCCATTTAAATGTTATACTTGCCGAGCGAAATTCCCTACTTCTCAAGCTCTTTTGAAACACAAGTATAAATGTCATGTGTTATCACCCAAAACTGATGATCTGAGGTGCAGATTCTGCAAAGAAATATTTGAAGATAAAGCTACTTGGAAAAAACATGTCGATGGCCATAAAGTTGGAGATTTTTACGCATGCAGTATTTGCAATTATCAAAAGAAAAATTCTAGCTCGCTGGAGAGTCACATGAATAAACATGCCAACAAAGAATTGTTTATTTGCAACGAATGCGGAAAATCATTTCAACAAAAAGGGCTGTTGAAAGAGCATTGGGATACCAAACAAAACCTTTCAAAAGGTTTGAGTTCTTGTTCTAAATTTAATTCAGAAAATTTGAATACGGCATTATTCAATAATCATGAAACTTTACAAGTCAATCGTTTAGCAATGCAAGGTAATCTCATTGCTATGCAGAATAGTCAATTAGCGATGAAGAATTTACAAGACTTGACCGAGTCTATTATGAAACAAATAAATTTCAACTCAATTGATTTGAAAGATAAAGCAAAATCTGAAGTGAGTACTTCCAAAGACGAGTCAGTAATTAAAGATGAAAAACCAAATTCATCATCATCAAAAACCGGAATCAAACTCTTAACGAAAATTGATAAACGATTGATTGGTAAAAATTTATCATCTATAGTTAAAAGACTACCTAATAATGTTCAGTTTCAAGCAAAAACAGATCGGAGATCTGGAAAGGAATTTGAGTGTAGCCACTGTCAGTTGAAATTCAAACTGAATTTTACGTTGATTCGTCATATGGAATCATTTCATGGGCCTGAAGAAATAAATGACAGAGCTTTCATAAAAATTTATTCCAAAAACATATTAAATATTGTCACCCTGGCAATAAAGTTTACAAGTGTGATGATTGTCATTATGCCACTGACATATTTTTGTCATTGCAAACTCATCGATGGACACATGTCAAGAAACGTCCGTATCGATGTCGTCTATACACTACAAAATCTTAAAATCCATTTCCGGAGAGTTCATACAAAAGAGCGGCCTTTCGTGTGTCCACACTTTCCGTGTAAATTTGCAGGAGCATATTCTCAAGATTTAAAAAGTCATATAAGAAATAGACATTCCAAGAATGATAAAACTGTTTCGCTAGATCATCTCAATAATAACCGTTCTCGCTCCCATACACATTTAAAAAGAAATTCCTCGAGTGTTAATTTGAAAGAATTAAAAACTGATAATGAAATTAATCCTATCGAAAAAATGTACCCGTGTACGGATTGCACATTTTCAACACCATATCTAAATGAATTGAAAGTTCATTCAAGTCAACACGAAACTAGAAGTTTACAAAGTTTTAAGTGTGATGCTTGTGGTAATAAATTTATTAATAAAGATCAGCACATCCGAAATTATCATTCATTATTTCCTTCAAATAAAGAAGCAAAATGTTCATTTTGTAATGAAACTTTTACTAATAACTATAACATGAAGTTGCATCTTAAAACTCATGCTAATAAAAACTTAAAAAAATGTGGCATATGTCTTTACATCACTTCTAGTAAAAAAAAGTCCATAAATCCAATTTTTAATCTAATAGTCAAGATTTTCTATCAAGAGAAAATGTATTCCGGAGAAGTCATACTTGTCAGTGATGAAGATTCCGAAATAGAAGTTTTAAGTAACACATCGTCAGCTGATAAAAATTCTAACGCCAATATAACTACAAGAATGCCGATTATTTTTAATCGCTCCAAAAGCATCAACAAAGAATCATATAAACTTAAGACTAATAATGATGATGAGTTCGTGAGTGATGATGATTATCACAATCGCTTGATGCAAGAATTGTCAAATGTTTTGGCTGTAAGAAATCTAAATTTTGACCATCAAAGTTCCTGTCCCAGCACTTCGGACAATTATGTCCCTGAACCGAGTTATGAAAACATTTTTGTCTCTGAGGATAATCAGAGTAATGATTTCAGCGACAGGAATCATATACAGATATTAAAAGTGGAATCATTAAGTGAATGGGAAGAACAATATACAGATAATCAATCAGAACATTTATTTTCACTGGTTGATGATAAAAGTAGTGGAAAAAAATTGGAGAAAAAAAGTCAAGCAACTAGGCATGAACTGAATATTCTAAATAAATATCTTCCTGTTGTTCAGCTTACAAAAGTTTCGCTGCCTTATAACAATATTCATTCAGAAAATTTTCATAAAAAGCAGTTACAAGTTGACAATACTACTGTAAATAACGTAATAAGTAAAAACGTTGTTGTAGAAATGTCCCACACTAATGATGATCAAGAATTTTTTGAATTTGAATGCAAAACTTGTAAGAAAACATTCTATTCGAACGAGTTACTCAGTAAACATATTAAATATCATATAAAGAGAATTCATACAAAAAAGACGTCCTTTGTGTCCTCACATCCTCCATATACTTTTGCTGGAGCAACTTCTCGGGATCTAGAAAGACTCTCCAAAATGGAACGTACCAAGAATAAGTACTATAAATGCACTATTTGTAATTTTAAGACTGGTACTTTACGTTGTCTTAATAATCATTTACGTCGCTTTCATAATGATAAAACTCCATACATCTGTACGGAATGTAGTTACAGTAGTACTAATTTAAGAGCATTGAATGTTCATATAAATCATCACTTTGCCAAAGAAATTTATCGTTGCTCTCAATGTACGTACTCTACTGCATGTAATAGTGATCTTCTATCTCACATTGAAATTCACAAAAGTAAAAAGTATAAATGTGATATTTGTAGATCGCTATTTTCAAAACAAGAAAGTTTTAGTAAGCATAAACTCGATAATCATACAGTATTTCCGTTCAATCAAACAGCTAAGTGTGAATTTTGCGACGATCAATTTACAAATAAATATAATAAAAAGTTGCATCTGATGACTCATGAGCATAAGAATAAAAAATTTCGTAAATGCAATCAATGTATTTACATGACGTTGTCCGTAAAACAATTTAAAAAACATATGGATGAGCATAAATTTAATAGATTATTTATTTGTAATGATTGTAGCAAGTCTTTTCCACTCAAGAAGTTGCTGGTACAACATAGAATCAAAATGTTCACATTAATTGATGATATGATGAAATATCCTTGTGATGGAATAGAAAACTTAATTAAAATATCCAATTTCAATAATAATGGAATCAATATGAACTACGATTACACGGAGCATGTAAACAGTGCAACAGATACTCAGTTCCTACCACCATCAAATACCGAACCAACATTAACAGAAAATATTAATTATATCTCAACATCATATGAACTTTTGGGTTCACAGAATGACGCTTATCTAAACTCATATCAAAATCGACCGGTCCAAAATTTGATATCCATAGACCAAAATGAACAAAATATCATACCTATTGTTCCCGAGTTTTCTTATCCAAATGTAAATCTTATGCCGACTATTCCGATCAACGATTATGCACTGGTTCCTTGTTATTATTTGGTGGTACCTGAAGATGGTCTTGTTGCGCCACCCATTATCCCAGTGAACAATATTCCAGAACAAGTTCCAGTAAGCTTTGAAGACCGCAGTAACTTTGTGATGGTAAACGTAGACAATGAGTTGGAAAAAACCAATGTCGCTTCAAATACCCAGGATTTGTTAAGTCAAGAAAATGAAGTAATTGATACTTGCCAGACTTCTGTCGCTGATTTTCCAAGTTGTGAATTGTCAACAGACTCAGTAGACAATTCAGTATCTTTAGAATCTTCATCAAACATAGAAGACCAGGTGACACCCGATGCTTCTATTTCTTCTCATCCTGAATCTGGAACTCAATCCCAGGCAACAGAAAAATCCCATCCATGTAAAATTTGTAAAAGAAAATTCAACAGTTTAAATCAATTAGAAATTCACATGGGAATTCACGACGTTGGAGATAAATTATTTAATTGTTCTGTATGCCATGCGAATTTCCATAAGTTTCATCTTTTAAAACGGCACATGCGGATTCATAAAAGCACCAAAACATTTACATGTGAAATTTGCTCAACAAAGTTTGAGTGGGCTGAATATGAGTGCGATATTTGCCATGTGAAGTTTACTGCGGCTTGTAACATGAAGAAACACAAGCTCACGCATACAGGCGAGAAACCCTTTCAGTGTGACATTTGCCAGGCAAAATTTACTCGATCAATCAGTCTTACTCAGCATAAAGCAACTCATACCAACAGAACTGAAGAGTGTGAAATTTGTAAATCGAAATTCAGGGGACCCTGGAATCTAAAGAGACACATGCGGATCCATACTGACGAAAAACCTTTCAAGTGCGATGAATGCCAATCGACATTCTCTCAAAAATTTTACTTGTCAAAACACATTCGTCTTCATTACAACAAAAAATCTTATGAGTGTGATTATTGTAAGATGAAATTATCTCAAAAATATTGCTTGATTCGTCATATGAAGATTCATGTGGGTAGTAGCGCGTACAAGTGTGACGAGTGCCAAAAAAAATTCCATTCCATACGAGGTTTGAGTCATCACAAGTGCATCCATACCGGAGAAGTCCCATTTGAATGTGATGTCTGTAAAAAAACATTTTTGAAGTTAAAACACTTGCTCAAACATGAAAATATTCATAAAAAGAAGAAAATGTACCACTGTGATATTTGTAACGCTGGATTTAACCAAGTCGGTCATGTTGCGGTCCACAAAATAAGGCATCATGAATCCCAATCGTCTCAAAATTTTAAATGCAAATTTTGTGATGAATCTTTCAAGAGTAGTTACTTCTTGAAGCTTCACCTTAAGAATCATAAAAATGAAAAATATTTTTACTGTAACATTTGCTTGTACAAGACAAGATGGCCTATTTCAATTAAAGTTCATACTCAAAATCACTCAAAAACAGGTTTGTATATTTGTTACGATTGTGGAAGATCATCTAAAAGAAAAATTTTGTTACTACAGCATAGGAAGAAGTTTCATATATTTATTAATACGCAATTCAATTTATCGCATATTAAGAAAATTATATTTGAACCTATTTTCATCTGTAATGAAAGCACAACTAAAAAAAACGCAATTATTAATTTAAATAAAATTTGTAGTCAATCATTTGATTCCAATTAA
Protein Sequence
MTTHQMEMENFITGDLTQDDQDFVSQELDDNSNIEKKVSISEMKNEIDCPSEIAAQKMDMLKNCMALNRITIRSIQTLNAGDFNLGHRSFQSLVSSTSASKNNIRTNTLTNSSDEALLPEESKDDIKLQENLSMTTEKKFFNKQDRENVNDNNLNPDSHCGKELFVVVLNDGTGAAVVQVSDEDTKKHQTNCENSLHEDTDFENLFEPNDVKNVCDLKEIRKSRVVAKKPKDELWKPPAQIEKSFKENKESKSSQVQKNYFSKNSCNCKECDREFDYSSAVNLRLEKSTGERFYKCPRCNFVSYYLASIKNHIRSHTGAKPFKCYTCRAKFPTSQALLKHKYKCHVLSPKTDDLRCRFCKEIFEDKATWKKHVDGHKVGDFYACSICNYQKKNSSSLESHMNKHANKELFICNECGKSFQQKGLLKEHWDTKQNLSKGLSSCSKFNSENLNTALFNNHETLQVNRLAMQGNLIAMQNSQLAMKNLQDLTESIMKQINFNSIDLKDKAKSEVSTSKDESVIKDEKPNSSSSKTGIKLLTKIDKRLIGKNLSSIVKRLPNNVQFQAKTDRRSGKEFECSHCQLKFKLNFTLIRHMESFHGPEEINDRAFIKIYSKNILNIVTLAIKFTSVMIVIMPLTYFCHCKLIDGHMSRNVRIDVVYTLQNLKIHFRRVHTKERPFVCPHFPCKFAGAYSQDLKSHIRNRHSKNDKTVSLDHLNNNRSRSHTHLKRNSSSVNLKELKTDNEINPIEKMYPCTDCTFSTPYLNELKVHSSQHETRSLQSFKCDACGNKFINKDQHIRNYHSLFPSNKEAKCSFCNETFTNNYNMKLHLKTHANKNLKKCGICLYITSSKKKSINPIFNLIVKIFYQEKMYSGEVILVSDEDSEIEVLSNTSSADKNSNANITTRMPIIFNRSKSINKESYKLKTNNDDEFVSDDDYHNRLMQELSNVLAVRNLNFDHQSSCPSTSDNYVPEPSYENIFVSEDNQSNDFSDRNHIQILKVESLSEWEEQYTDNQSEHLFSLVDDKSSGKKLEKKSQATRHELNILNKYLPVVQLTKVSLPYNNIHSENFHKKQLQVDNTTVNNVISKNVVVEMSHTNDDQEFFEFECKTCKKTFYSNELLSKHIKYHIKRIHTKKTSFVSSHPPYTFAGATSRDLERLSKMERTKNKYYKCTICNFKTGTLRCLNNHLRRFHNDKTPYICTECSYSSTNLRALNVHINHHFAKEIYRCSQCTYSTACNSDLLSHIEIHKSKKYKCDICRSLFSKQESFSKHKLDNHTVFPFNQTAKCEFCDDQFTNKYNKKLHLMTHEHKNKKFRKCNQCIYMTLSVKQFKKHMDEHKFNRLFICNDCSKSFPLKKLLVQHRIKMFTLIDDMMKYPCDGIENLIKISNFNNNGINMNYDYTEHVNSATDTQFLPPSNTEPTLTENINYISTSYELLGSQNDAYLNSYQNRPVQNLISIDQNEQNIIPIVPEFSYPNVNLMPTIPINDYALVPCYYLVVPEDGLVAPPIIPVNNIPEQVPVSFEDRSNFVMVNVDNELEKTNVASNTQDLLSQENEVIDTCQTSVADFPSCELSTDSVDNSVSLESSSNIEDQVTPDASISSHPESGTQSQATEKSHPCKICKRKFNSLNQLEIHMGIHDVGDKLFNCSVCHANFHKFHLLKRHMRIHKSTKTFTCEICSTKFEWAEYECDICHVKFTAACNMKKHKLTHTGEKPFQCDICQAKFTRSISLTQHKATHTNRTEECEICKSKFRGPWNLKRHMRIHTDEKPFKCDECQSTFSQKFYLSKHIRLHYNKKSYECDYCKMKLSQKYCLIRHMKIHVGSSAYKCDECQKKFHSIRGLSHHKCIHTGEVPFECDVCKKTFLKLKHLLKHENIHKKKKMYHCDICNAGFNQVGHVAVHKIRHHESQSSQNFKCKFCDESFKSSYFLKLHLKNHKNEKYFYCNICLYKTRWPISIKVHTQNHSKTGLYICYDCGRSSKRKILLLQHRKKFHIFINTQFNLSHIKKIIFEPIFICNESTTKKNAIINLNKICSQSFDSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-