Cses003820.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cotesia sesamiae
Gene Symbol
zfh1
Assembly
None
Location
scaffold:13349-25792[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 40 0.01 1 9.9 2.0 1 23 8 30 8 30 0.96
2 40 4.2e-05 0.0042 17.5 0.7 3 23 38 58 37 58 0.98
3 40 3.3e-07 3.3e-05 24.1 0.6 1 23 64 86 64 86 0.98
4 40 7.8 7.7e+02 0.9 4.2 1 23 95 117 95 117 0.89
5 40 0.3 30 5.3 0.2 2 23 124 144 123 144 0.94
6 40 4.2e-06 0.00042 20.6 1.5 2 23 151 172 151 172 0.97
7 40 0.0075 0.75 10.4 0.1 1 17 178 194 178 195 0.93
8 40 0.016 1.6 9.4 1.7 1 23 314 337 314 337 0.96
9 40 0.013 1.3 9.7 0.2 2 23 344 366 344 366 0.93
10 40 0.0026 0.26 11.8 1.8 1 19 372 390 372 393 0.94
11 40 0.0011 0.11 13.0 0.9 1 23 418 440 418 440 0.98
12 40 4.4e-05 0.0044 17.4 3.0 3 23 448 468 447 468 0.97
13 40 0.00094 0.094 13.2 0.1 1 23 474 496 474 496 0.98
14 40 0.53 53 4.6 1.6 1 23 502 524 502 524 0.96
15 40 4.7e-07 4.7e-05 23.6 0.1 2 23 531 552 530 552 0.97
16 40 2.9e-06 0.00029 21.1 1.1 3 23 560 580 559 580 0.98
17 40 2.7e-06 0.00027 21.2 4.0 1 23 586 608 586 608 0.98
18 40 0.0056 0.56 10.8 0.4 1 23 657 679 657 679 0.91
19 40 1.7e-07 1.7e-05 25.0 1.1 1 23 685 707 685 707 0.99
20 40 9.2e-07 9.2e-05 22.7 0.1 1 23 713 735 713 735 0.98
21 40 0.00033 0.033 14.6 1.7 2 23 742 764 739 764 0.93
22 40 1e-05 0.001 19.4 6.7 1 23 769 791 769 791 0.97
23 40 2.7e-05 0.0027 18.0 1.5 1 23 800 822 800 822 0.98
24 40 7.3e-06 0.00073 19.9 0.9 1 23 828 850 828 850 0.97
25 40 8.1e-05 0.0081 16.6 1.3 2 23 857 878 856 878 0.97
26 40 4.8e-05 0.0048 17.3 3.6 1 23 884 906 884 906 0.98
27 40 3.2e-05 0.0032 17.8 0.4 1 23 912 934 912 934 0.96
28 40 7.1 7.1e+02 1.0 0.8 1 21 1008 1028 1008 1031 0.88
29 40 2.2e-07 2.2e-05 24.7 0.6 3 23 1040 1060 1039 1060 0.98
30 40 6.4e-06 0.00064 20.0 3.3 2 23 1090 1111 1089 1111 0.96
31 40 0.00019 0.019 15.4 3.6 2 23 1117 1138 1116 1138 0.96
32 40 0.00051 0.051 14.0 0.1 1 23 1143 1165 1143 1165 0.98
33 40 7.9e-07 7.8e-05 22.9 2.6 1 23 1173 1195 1173 1195 0.98
34 40 6.4e-05 0.0064 16.9 1.0 1 23 1280 1302 1280 1302 0.97
35 40 9.6e-06 0.00096 19.5 4.2 1 23 1308 1330 1308 1330 0.99
36 40 0.21 21 5.8 1.0 2 23 1338 1360 1337 1360 0.93
37 40 5.3e-06 0.00053 20.3 3.6 1 23 1366 1388 1366 1388 0.97
38 40 0.54 54 4.5 1.3 1 22 1393 1414 1393 1416 0.85
39 40 1.7e-05 0.0017 18.7 2.1 1 23 1423 1445 1423 1445 0.97
40 40 2.2 2.2e+02 2.6 1.8 7 23 1445 1461 1445 1461 0.96

Sequence Information

Coding Sequence
ATGGCTCTGCACGGCAGTCCTCACGTGTGTCACATATGTGGCGCGAAGAAAACTTCAGAGTACGACCTGACGATTCACGTCCGGCGGCACAACAAGGAGTTCACTGAATTCTGCCCAGTTTGTAAAAAAGGATTTTATTTAAAAGCTAATTTGAAGACACATATGATCAAGCACTCCAATGGCCAGTCCTTCGTCTGCCAGGTCTGCGAGAAACCCTTCAAAAGCCAGGCCTACCTCAAAACCCACATGCGGATTCACCAGCAGTCTGACACCAGGAAAAAACACTCCTGCGCTGTCTGCGGGTTTGAAACTTTCTACAGCTACTGCTTCAAGGAACACATGTGGACCCACACCGGAGAAAGTCAGCTTCCTTGTCAGTACTGCGGGAAGCTCATTCGCCGGGACTACATCAAAGTTCACGTGAGGATTCATACTGGGGAAAAGCCAGAAGTTTGCGAGTTCTGCGGAAGATCTTTTGCCTCCAGGAGGTATCTTATGAAGCACCGAAGGACTCACACTGGGGAAAAACCTTACCAGTGCCATCGCTGCGAGAAGGCTTTTGCTCAGCGCGGAGCGCTTACTTCTATCAAAAGCGAGTTAATATCTGACGTATTAACGCACAATATTCAGGACGAGGGTGAAGGATCGACAAACCAGTCTTCAGACGACAAGCCTAAATTAAATGTCATTAAGATAAAATTACTGAGGGTAAACTGCGCCACTAAGGAGCCACCGCCGATGATCCCTCTGTCTCTCCCTCCAGCTAAGCCGACTAGCACTGGAATCAGTGTTAATAATCCAGTCAATGTAAACCCCAGTACTATCCCCGCCAAGTCAAAGCCAAAGCCAAAGCCAAAGCCAGTGAAGCTGAAACCTGACCGTGAGAAGGTGAAATCCGAGCCGGAAAAAAATGAAGAAAAACCCAAAAGTGGAAAAAGGTACAAGTGCAATATCTGCGGGAAAGAGTCCTGGAATTTTCACCAGTGGGAGCGACACTACCGGCTGGACCACGGGAAGCCCAAAGCTGAGAAATGCGGGCAGTGCGATAGAATTTTTTACGACGACGAGAAACTCGCGAGACACGTGGTGAAGATGCACCAGGAGGAGCGACCGTTTCCCTGCCACATCTGCAACAAGCCCTTCAAGACCGACAAATTCCTGAGGATCCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAGCAGCACAACAAGCGATACTGCTGCGAGATCTGCGGGATGTCCAAGGTGTCTCCTTATGACTTGCGGCTCCACATGATGAAGCACAACAAGGAGTACTATGCGCACTGCGAGTACTGCCAGCGAGGGTTCTACACCAAGCAGTCTCTTCAGCGACACATTCTCACCCACACCGGCGAGCGGCCCTTCGTCTGCAGGATTTGCAACGCCTCTTACGCCAGTGCCTCCTACTTGAGTCTCCATGCCAAAAGCCACACACAGAGGGAGAAGTTCAAGTGCAACCTCTGCGACTACGAGACCTTCTGGAAGACCTCGCTCAAGGGCCACGTTAAAAAACACACCGGGGAAAATAGGATTAGTTGTGAGGTCTGTGGGAAAACTGTCTCCAGTCAGTCTTATCTCCAGGTTCATATGAGGATACACACTGGAGAAAAACCTAATATTTGTGAGGTCTGCGGGAAGTGCTTTAGTGTCAGAAAGTACTTGATTGTTCACCTTAGGACTCACACCGGCGAGAGGCCTTATGAGTGCAAGGTCTGTCATAAAAGATTCACCCAGCATGGATCGCTCAATGCTCATATGAAGGGACACAAAAATATGGTCGAAAAGGTTGAAGCTATTGACTTTGAGGAGCTGGAGGAAGAATTGTTTCACTCGGAAATAAAGCCGGAGTTGCTAATAAACAGTACAAAAAGCCCAGGGATTCAAAAGAAGCTAAAAGAAGAAGAAAAAGATTACGCCTGTAAAATCTGTAACAAGCAATTCAGATTGAAGAACCTGTTCGAGGGGCACTTGGTGGCGCACAGCGACTTGCGACCGTACCAGTGTGACATCTGCAACAAGTCATTTAAGCGAACGAGTACCCTGGCAGTGCACCGGAGGATCCACACGCGGGAGCGGAACTTTATCTGCGACGTGTGCGGGCGCGCTTTTATCCAGGCGTCCCAGTTGGCGATGCACCAGCGAAGACACTTCGAGAAGTACATCTGCTCCTGTGAACTCTGTGGCAAGGGTTTCTTCACCAATGCGGAGTTGCACGGCCACATGAACATCAAGCACGGCGCCAAGGAGCACGTGTGCCACCACTGCGGAAAGTCCTTCCCGAACAATCACACGCTGATCAGGCATGCCAAAGTCCACGACCCGGACTTCAAGCCCATCAAGCACCAGTGCGAGTTCTGCGGGAAGATATTCGCCTACAAGAACTCCCTGATGGTCCACGTGAAGTCTCACACTGGAGAGAACAAGTACGACTGTCATCTCTGCGGAAAATCCGTGTCCTCCAGAGGCTCGCTCCAGGACCACTTGCGGCTCCACGGGGGAGAGAAGTCTTTAGTCTGTGATGTTTGCGGCAAGGCTTTTCACAAAAGGACCACCCTGGTGGTCCACAAGCGCACGCACACTGGAGAAAAACCCTACAGCTGTGATACCTGCGAGAAGTCTTTTACTCAACACTCGACCCTGGTAATCCACAAACGCTACCACACTGGGCAAAGACCGTATCAGTGCTCGGTTTGCACTAAATCATTTGTCTCCAGGGCGCTGCTTAATGTCCACAGCAAAGCTCACAATGTTGAACCTACATTCACTCAGCCTCCCAGCTGCAAAGTGTCTTCGTATTACCCGATTACAAATGAAGATCTAAGACTGACAAATGACCCAGCGCAACAAGAGGAAGATAAGATACTCGACGTAGACCCTGAGTACCCCCTGAACTCGGAGGTCTGCTATAAATCAAAGCTGCGAGAAGACAGCGAGGATGCTAATCAGGAAGACATGCCTTTGGCGTACTACTGCAAGCCCTGCGCGAGGTTCTTTGCCTCTCAGCCGGTCTTTGAGAAGCACAAAGTAGAGTTTCACGGGAGAAGACCCATGAGGAACGCCTGCGAGGAGTGCGGGCGGGTCTTCAGGACTTTGTCGAGTCTTCGTAATCACATGAAGAGCCACCGGGGTAAGATTGAGTCTGACCTGGAGGCCAGCGACAAGGAAATCGACGGGAAAATCGAGGGAGAGACCCGGACCAGGTGGGAATTGGTCTGCAATATTTGCAGCAAGGTCTTCCGGCACAGGAGCAACTTCAAGAAGCACCTGGTGAGACACACCACCGGAGATCTGATTTGCAAGCACTGTCCGAAAAAATTCAGGCTGTATCGCGACTTGACTCGTCATGAAAAGACTCACTTTCTGCCCAGCTACATGTGCAAGGAGTGCGACTACGAGACCACTGTCCTGGCCGCTCTGACGGTCCACATGCTCAAGCACACCGACAACGCCGGGCTGCCCTACAAGTGTAACGACTGCGATAAGCACTTCCGGAAGGCCAGCGACCTCCAGGAGCACTACAACATCCACTCCGGGGACAAGCCGTTCGGCTGCGAGCAGTCAAAGGAGGTAAATTTGTCAGAGAAAGAAGACATTAGCTCAGCAAATTTATTCTCCAAAAAAGAAGATCCGATAATTAATGACAATCCGATTAGATCTTGTGGAAATAAAAAAATTCCAGGATCCATTAACAGTATTACAAAGATCAAAGTCCCGACGGGAATAAAAAGCAAGAAAGCTCCGAAAATAATTTCTTCATCTAAAAAAGAAGAAATAAAAAGATTCTTCTGCGAAATTTGCCCGCTGACTTTCGATCTAAAGAGCAAGCTTCGCTCCCACATGCTAAAGCACAGTATCTCGCGACCCTACAAGTGCAAAACTTGCTTCAAGAGCTTTAAAAGCACGGTGTACTTGAACAAACACATGGAGACCCACCGCGAGCCCTTGGAATATTTATCCTGCAGTTTGTGCGACTTCAAGGCGAAAACAAAGCCGTATTTGAAGATCCACTTCATCCGCAAGCACACTGATGAATATAATTACGAGTGCTCGCACTGCGGAAAGAAGTTCAAAGTGCAATCGGACTTTACGACCCACCTCAAGGACCACGACACCGAGGCTTTTGTCTGCGACATCTGCGGGAGCTTTTATCCCAAAAGAAGCTCCCTTTACTTTCACACTCTCTACAAGCACAAATTAAAAGTTAAAGAGTACGAATGCGTGACTTGTAAAAAGAAATTCAAGAGCCAGAAGAACCTCAACGCTCACAAAGAGTCCCACAAGAGCTTTACTCAGAGATCACCTATGATGCTTCATCGGAAAAAACACCCTGGAGTACATCCTACTCCCCCGCCGATTAAAATTACTGAGCTGCTGCATGGAGTTAGAGATAAAAGTGAGGATAGTTAA
Protein Sequence
MALHGSPHVCHICGAKKTSEYDLTIHVRRHNKEFTEFCPVCKKGFYLKANLKTHMIKHSNGQSFVCQVCEKPFKSQAYLKTHMRIHQQSDTRKKHSCAVCGFETFYSYCFKEHMWTHTGESQLPCQYCGKLIRRDYIKVHVRIHTGEKPEVCEFCGRSFASRRYLMKHRRTHTGEKPYQCHRCEKAFAQRGALTSIKSELISDVLTHNIQDEGEGSTNQSSDDKPKLNVIKIKLLRVNCATKEPPPMIPLSLPPAKPTSTGISVNNPVNVNPSTIPAKSKPKPKPKPVKLKPDREKVKSEPEKNEEKPKSGKRYKCNICGKESWNFHQWERHYRLDHGKPKAEKCGQCDRIFYDDEKLARHVVKMHQEERPFPCHICNKPFKTDKFLRIHXXXXXXXXXXXXXXXXXXXXXKQHNKRYCCEICGMSKVSPYDLRLHMMKHNKEYYAHCEYCQRGFYTKQSLQRHILTHTGERPFVCRICNASYASASYLSLHAKSHTQREKFKCNLCDYETFWKTSLKGHVKKHTGENRISCEVCGKTVSSQSYLQVHMRIHTGEKPNICEVCGKCFSVRKYLIVHLRTHTGERPYECKVCHKRFTQHGSLNAHMKGHKNMVEKVEAIDFEELEEELFHSEIKPELLINSTKSPGIQKKLKEEEKDYACKICNKQFRLKNLFEGHLVAHSDLRPYQCDICNKSFKRTSTLAVHRRIHTRERNFICDVCGRAFIQASQLAMHQRRHFEKYICSCELCGKGFFTNAELHGHMNIKHGAKEHVCHHCGKSFPNNHTLIRHAKVHDPDFKPIKHQCEFCGKIFAYKNSLMVHVKSHTGENKYDCHLCGKSVSSRGSLQDHLRLHGGEKSLVCDVCGKAFHKRTTLVVHKRTHTGEKPYSCDTCEKSFTQHSTLVIHKRYHTGQRPYQCSVCTKSFVSRALLNVHSKAHNVEPTFTQPPSCKVSSYYPITNEDLRLTNDPAQQEEDKILDVDPEYPLNSEVCYKSKLREDSEDANQEDMPLAYYCKPCARFFASQPVFEKHKVEFHGRRPMRNACEECGRVFRTLSSLRNHMKSHRGKIESDLEASDKEIDGKIEGETRTRWELVCNICSKVFRHRSNFKKHLVRHTTGDLICKHCPKKFRLYRDLTRHEKTHFLPSYMCKECDYETTVLAALTVHMLKHTDNAGLPYKCNDCDKHFRKASDLQEHYNIHSGDKPFGCEQSKEVNLSEKEDISSANLFSKKEDPIINDNPIRSCGNKKIPGSINSITKIKVPTGIKSKKAPKIISSSKKEEIKRFFCEICPLTFDLKSKLRSHMLKHSISRPYKCKTCFKSFKSTVYLNKHMETHREPLEYLSCSLCDFKAKTKPYLKIHFIRKHTDEYNYECSHCGKKFKVQSDFTTHLKDHDTEAFVCDICGSFYPKRSSLYFHTLYKHKLKVKEYECVTCKKKFKSQKNLNAHKESHKSFTQRSPMMLHRKKHPGVHPTPPPIKITELLHGVRDKSEDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00380535;
90% Identity
-
80% Identity
-