Basic Information

Gene Symbol
RERE
Assembly
None
Location
scaffold:2377-13618[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.7e-08 1.8e-05 24.7 0.3 2 45 123 167 122 168 0.90
2 2 4.3 4.6e+03 -2.2 0.0 23 36 614 627 609 628 0.85

Sequence Information

Coding Sequence
ATGTCCGCTGGCACCCAGGGCGAGATTCGGGTCGGTCCATCGCACCAGGCCCGTTTGCCTGATTACCGGCCTGGTGTGCCATCAGCAGACCTTCCACCAGATCCAGAGTTCACTAAACAACGAGAAGAATTAAGATGGATCCCAGCGATGTCACTGGACGGCGACCTGCTCATGTATTTAAGAGCAGCACGTTCAATGGCCGCGTTTGCTGGTATGTGTGATGGAGGTTCACCAGATGATGGTTGCGTCGCAGCATCCCGAGACGACACGACTATCAACGCACTTGATATACTCCACGACTCTGGATATGATCCAGGACGAGCACTTCAAGCTCTTGTCAAATGTCCAGTGCCCAAAGGCATCGATAAAAAATGGTCCGAGGAAGAAACTAAACGATTTGTCAAAGGTCTCCGTCAATTTGGAAAAAATTTTTCACGTATACGTAAAGATTTATTACCCCATAAAGATACACCAGAATTGGTTGAATATTATTATTTATGGAAAAAGACACCAGGTGCAAACAATAATCGTCCCCATAGACGTCGACGTCAAGGTTCATTACGACGTATACGAAATACACGTAATTCACGTGCGGGTACTCCCAAAGAGGAGACACCCACTGTTCAAACTAAAGAAAATAATACACCAGCAAACACGACGAGTGCTAAGGAAGCAACTACCGAGCCAGAGACACCGTCTGTCGGTGCTTCGGCAAGTAGTAACAATAATAATAGTACAAGTACTAATAATAACAATAACAATAATAACAATAACAATCCGGGCGGTGAAGTTAGTTCTGTGACAGAGGACGATAATTCCGAAGAAGACAGTGATTCACGTGATACAAATACCAACGGTTCAGCATTTGAACGTTCTTGTCAGCATTGTTTTTCAACAACATCTAAAGATTATCAGATTGCTGGTAAAGATAGATTATTACTTTGTCTGGAATGTCGATCGTACTTGAAAAAAACAGGAGAACTACCTCCACCGCCGCCTTATCTATTTCGACCCGTTCCCGCGGAGTCACCGGACAGTCCCGGTAGAATGCGGACACGTAATAAAGCTAAAGAAACTCCACGTCCAGCACGGCCACGTAGAACTGGGGGTACTGATACTCCCGATCAAGAGAAACAGCAGCAACAACAAAATCAACAACAAACACCAGACAAGAAAAAGAAGTCCAACAAATCTGAGACACCTAAGAAAACTCAAAAGAGGCCACAGATTGACGATAACGACGAAGATAAAGATCAACAGAAACGTAAACGTGCTGAAAGCCCATCAGAATCACTAACGACCGATTCAAACTCGCTGATGGATGAACCAGAGCGCGAAAACGAAGTTGATTCTAATGAGAATCAACCTTCCTCAAATGTACCGGTGGTTAATGAAGAACCCATTTCACCTGAAACAACACCTGAAGAACCCTCAGAACCTACCCCAGCATCTACTCCTATTCCTCCACCTGTTGTTGCAACCCTACCTATCAATGGTCTTCCTCTTAATATGCAATACTCAGGTAGTATACAAGCCGCTCAAACGGTGCCACAAAATCTATCGCAAAATATATCGATACCACAAAATATTCCACAACCAATAGCTCAAAGCTTAGTGGCATCGCGTGATATGATTCAACCGGCAATAACGAATCATGGTGAACCACAGCCTTTAGCTCCAAGTATACCTGTTCCGCCGTTGAATTTAAATATACCACAGAATTTATCTCAAATGTCGCAAATGCCACTTTCACCGCAACCACTGGGTCTTACAGTAATGCCTACTGATAATCGAATTAACGAGCGACTCAACGACGAAAGAATACCAGAGCGAAAATTATTCGATCGTATAGCTGACAGAATACCCGAAAGAATGGAAAATAATGATCATCACCATCATCATCCTCACCATCATCAACAACAAGACCATCAGGATCGTCCGCCACCAGAACCGGTTAATCTTTTCCAGCCAATCCAGCCTCCGCCGCCAATGATTAACGAGAAACCGCCAGCTATATACAGTCTTGCCACAACACCGCCTATGGAACCTCAGAACTTGAAAATAAAACAAGAAATCATTCATCCAGAACCTGATCCACTTCAGAGTTTAAAAGAGGTTAAAGTTCCCGGATTTCAAGGTGGTTTTCCAGGCCCGAGCTTGGACAATATTAAAAAAGATCCAGATGCCAGTAAACCACCGACACCAAGTAAGCACTCGAGTCAGCCACCTTTGGCCCAGCAACAGCAACAGCAGCCGCCTGTACCAATACAACAGTCAATAGCAGCATCACCAACTCCACTACCTCCTCCCACGTCAATTCCTCAGCCGGTAATGCATCCAAGTCAGCAACCGAGTCCTCACATGGCCCATCCATTCCATCCCCACCATCCACTAATGCATCATTCACTTTTTGCGGCAATGCATCCGTATCATGCACACGCTTATCCTGGTTATCCTCCAGTCAGTGGGTACCCGTCATTCCCACCTTATCCATACGGACCGCCAGTTCCTCACGCCATTCCACCGCCGTCGCCTCAGCGTAGTCAGGAAAGCACGACGATGATGACAGCCCATCACTCGAGCTCGAGCTCCAGTGTGACAACAAGAGAAGAAGGTGAGAATTTAATTGCAACTCATCATCACTCCTCGTCAAGTCATCATCAAGCTGCAACGCTGCATCACGACAAACTACTGAGTATTTCATCCCACTCGTCGCACAGTCACTCATCTTCGTTGCACAGCAGTTCACAGCACAATAGTCAGCGTAAGCAGCAGCAGCAGCAGCAGCCACCACCCCAGATGGTACAGCAGCAGGGTTGTTTAACGCCCTCGAGCACCATGCACCACCATCATCGTGGACCTCCGTCTTCCGTGCCGCAAAATATACAACAGCCGCCAATTATTGAGCCTAAAGTCGAGGAGATGATGGAACCAGAGCCAGAAGAGCCGCCAAGTCCCCGGGGACCTTCACCTGAGGCACGCATCGAAGATTCCGAGTGTCATCGGTCACAATCCGCGATATTCTTGCGTCACTGGAATCGCGGTGAAAGTAACAGCTGCACACGTACTGATCTTACCTTCAAACCAGTGCCCGAGTCAAAATTAGCTCGCAAGCGAGAGGAGCGCTCGCGCAAGCAAGCTGAACGCGAACGCGAGGAACGGGATCGTGCCGCTCAGCAAGCTCGTAAAATGTCTACGCCGGAAAAACAGCCAGAAGTTTGTAAGCCTCCGAGTCGAGGACCAATGGAACCTGTCGTTTCACCCTACGACAGGTATGCAACGACCCGTCCTACTGCCTACACAGACACTCCGGCGTTGAGACAATTGTCGGAATATGCCCGCCCACACGCTGGGTACTCCCCCGCTAGACATCCTGTACCTCCCGAGTCTTTGATGCACTATATGTACGCACCTGGTGCTAGGGAGAGACTTGAGCTTGAACACATGGAACGAGAAAAACGGGAAAGAGAATTGAGAGAGCTCAGAGAACGGGATCTTAATGATAGATTGAAAGAGGAATTGATGAAAGGAACGCCCAGGCCTATGCCAGGAGGTGTTGATCCTCATTGGCTGGAGTTACACAGAAGATACGGAGGTCTTGGACCTGGACCTTCTGGGCCACCTCAGAGTCTTCAGCATCTTGGTTTTTATGGTGCACCTCCTGGTCCAAGTCAATTAGACCGTGAACGGATGGAAAGATTAGAAAAGTGTGTTGACATTGGGTCCGTTGATTGTGCGGGTTTAGGGATTCCCACTGGAGCCGGCGGGGGGCCAGCGGGCGCAGGAGCCGGCCATCCTGTTGCACATCATCATGGCCAGCTTGACGAGCGACTGGCTCTAGCTGCCGATCCGATGATCCGATTACAGATGGCTGGCATCTCGCCCGAATATCATGCTCACACTCACGCGCATACTCACGCGCATACCCACTTGCACCTACATCCAGGACAACAGCAGGCCCAGCAACAAGCACAGCAACAACAGGAAGTGGCTGCCGCTGCCGCTGGATACCCCCTGCCTGCGGTGGCTAATGCTAATTATCCACGACCTGGGATGATGCAACGTGATCCAACGCTTGGATTACACCCGGCGGAGTTATTATCACGTCCTTATGCCGACATGGCGGCACATGAACAATTTCAACGTCACTTGATGATGGAACGGGAACGGTTTCCAGCTCATGCATCAATAGTCGCTCAACATGAAGAATATTTAAGAGATTCTTATTATAGACAACAACGTGAACGTGAATTAAAAGTTCGTGCATTAGAAGAAGCTGCTCGTGGATCACGACAATGA
Protein Sequence
MSAGTQGEIRVGPSHQARLPDYRPGVPSADLPPDPEFTKQREELRWIPAMSLDGDLLMYLRAARSMAAFAGMCDGGSPDDGCVAASRDDTTINALDILHDSGYDPGRALQALVKCPVPKGIDKKWSEEETKRFVKGLRQFGKNFSRIRKDLLPHKDTPELVEYYYLWKKTPGANNNRPHRRRRQGSLRRIRNTRNSRAGTPKEETPTVQTKENNTPANTTSAKEATTEPETPSVGASASSNNNNSTSTNNNNNNNNNNNPGGEVSSVTEDDNSEEDSDSRDTNTNGSAFERSCQHCFSTTSKDYQIAGKDRLLLCLECRSYLKKTGELPPPPPYLFRPVPAESPDSPGRMRTRNKAKETPRPARPRRTGGTDTPDQEKQQQQQNQQQTPDKKKKSNKSETPKKTQKRPQIDDNDEDKDQQKRKRAESPSESLTTDSNSLMDEPERENEVDSNENQPSSNVPVVNEEPISPETTPEEPSEPTPASTPIPPPVVATLPINGLPLNMQYSGSIQAAQTVPQNLSQNISIPQNIPQPIAQSLVASRDMIQPAITNHGEPQPLAPSIPVPPLNLNIPQNLSQMSQMPLSPQPLGLTVMPTDNRINERLNDERIPERKLFDRIADRIPERMENNDHHHHHPHHHQQQDHQDRPPPEPVNLFQPIQPPPPMINEKPPAIYSLATTPPMEPQNLKIKQEIIHPEPDPLQSLKEVKVPGFQGGFPGPSLDNIKKDPDASKPPTPSKHSSQPPLAQQQQQQPPVPIQQSIAASPTPLPPPTSIPQPVMHPSQQPSPHMAHPFHPHHPLMHHSLFAAMHPYHAHAYPGYPPVSGYPSFPPYPYGPPVPHAIPPPSPQRSQESTTMMTAHHSSSSSSVTTREEGENLIATHHHSSSSHHQAATLHHDKLLSISSHSSHSHSSSLHSSSQHNSQRKQQQQQQPPPQMVQQQGCLTPSSTMHHHHRGPPSSVPQNIQQPPIIEPKVEEMMEPEPEEPPSPRGPSPEARIEDSECHRSQSAIFLRHWNRGESNSCTRTDLTFKPVPESKLARKREERSRKQAEREREERDRAAQQARKMSTPEKQPEVCKPPSRGPMEPVVSPYDRYATTRPTAYTDTPALRQLSEYARPHAGYSPARHPVPPESLMHYMYAPGARERLELEHMEREKRERELRELRERDLNDRLKEELMKGTPRPMPGGVDPHWLELHRRYGGLGPGPSGPPQSLQHLGFYGAPPGPSQLDRERMERLEKCVDIGSVDCAGLGIPTGAGGGPAGAGAGHPVAHHHGQLDERLALAADPMIRLQMAGISPEYHAHTHAHTHAHTHLHLHPGQQQAQQQAQQQQEVAAAAAGYPLPAVANANYPRPGMMQRDPTLGLHPAELLSRPYADMAAHEQFQRHLMMERERFPAHASIVAQHEEYLRDSYYRQQRERELKVRALEEAARGSRQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2