Cses002583.1
Basic Information
- Insect
- Cotesia sesamiae
- Gene Symbol
- -
- Assembly
- None
- Location
- scaffold:24816-27266[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-07 0.00022 20.9 0.0 1 34 20 53 20 61 0.89 2 2 3.6 3.8e+03 -2.3 0.0 29 39 186 197 186 199 0.81
Sequence Information
- Coding Sequence
- ATGAATAAAACAAAAAACAAAAAAAAAATTAAACTGGAAAAAAATATGTTCTCCTATACTCCTGAGGATCTAAATACTGTCATCATCAATGTTCGCGAAGGCAAAATCAGTGCCGACAAAGCAAGTATTACTTATAATATTCCAAAGGGCACTTTAATAAATAAATTACATCACAGACAAGAATTAACTGACAAAAAACCGGGACCTAATCTAGTACTTTTTCCAAAAGAAGAATTATGTTTAAGAAATTGGATTATAGATAAAGCACGCGTAGGATTTTCCATGCACTCAGAACACCCAGAGATCACTTTGAAAAATACCGAAGTACTTTCCAAAGCTCGAGCATCGGTTACAGAAACAGGTATATTAAATTGGTTTGATGGATTGTTAAACTGTTTGACCGAAGTACAGGCTGAAAAAGTATTAGAAGATCCAAAACGTTTAATAAATTTAGATGAATTGGGAATGTTGACAGGTCCGAAGGCAGATAAAATTCAAGCAACACTCTACCTGGTGCGGATTACGGCGAGCCAAAGAGACTTGTTCTTCCACGAGCCAAAGACGACTCTTCACCTGGAGGCTTTGAACCAAAAGGTGGTAGTACCCGTTACAAGTGTTCTTTGCTCATTCTCTGCAGATGGTTCATCATATGATCCGATGATTATATATCCATATAAGAGAATTCCTCATGATATAGCAACGGAGATACCTGATGGTTTTGCTATCGGAATAAGCGTCAACATTTTATATTCCTGTTTAGTAAAAAATAGTATTGAATTTCCTGTTTTAATACTCTTTGACGGTCACAAATCTCATATAAACATAGTTTTACATGATTTTTGTGTAGAACATGAGATATTATTGTATGTTCTGTATCCAAATACCACTCATATTTTACAACCTTGTGATGTAGGTATCTTTCATCCATTAAAAATTGAATGGAGAAAAATAATAGCACAACATATACAATCAACGACCCAGTCAGTAACAAAATTCAATTTTGCACAGCTTTTTTCGGCAGGATTCAAAAATGCTATAAATCCTAAAATTATTCAAAGTGTTTTTTCAGCTTGTGGGATTTACCCATTTAATCCAAAAATAATTGATTACTCAAAATGTATTTCCACAAGACGTCAAGACTTGAGCAATGATTATACACCCTATGCAAATAACCAAAATTTAACAAACAATTATAATACGGAGTGTTTAAAAATAATTGAGTCATCAATGCCTGCTGATTTGCTGAAGGAATTTAAGCAAGCATATGATCGTCATGAAAATCCATCTTCCGAAGAATTGCTATATAACATATGGAAAAAATTGAACATTACTATTGAAGAATCTGCTATTGACGATCCTGCTATTAATGATGCTAATATTACAGCTGAAAAGGAAGATGATCATTTGGATCCAACAATTTTGCCTAATACTGTTTCTAATATAACACTTGATAACCTGGCCTCTGAATCATTAGAATACGATGATACAAATCTAAACGACCAAACTTCAAATCATTTTTCTTATCATGATGATAATAATAATATAAATGATTATATTAATTATTCATCAAAAAGTTTTAAAAAACCTGTCATTCTCGAATCAACAGTTAATAATTCACAAATACATTTAGACGATACTGTCATTCTAGAATTAAAAAATGATGATAATAAGTTATTGCTGAATTTAGAAGGAACAGATATTTTAGAGTCATCTACCAATGATTGTAAAAATAATTCTAATTTGAAACTAATACCTATTTATAACGCCTGTAATCAAAGTAAGCAAGCTGAACGTTTAATAAAAAATGAAAAACTTCAACAAGAAAAAATTGAAAAAGCAAAAAGGAATCAAGAACACATGATTAAAAAAGAATTGATTGAACAAGAAAAACTTAAGAGAGCCAAAGACAAAGAAGAA
- Protein Sequence
- MNKTKNKKKIKLEKNMFSYTPEDLNTVIINVREGKISADKASITYNIPKGTLINKLHHRQELTDKKPGPNLVLFPKEELCLRNWIIDKARVGFSMHSEHPEITLKNTEVLSKARASVTETGILNWFDGLLNCLTEVQAEKVLEDPKRLINLDELGMLTGPKADKIQATLYLVRITASQRDLFFHEPKTTLHLEALNQKVVVPVTSVLCSFSADGSSYDPMIIYPYKRIPHDIATEIPDGFAIGISVNILYSCLVKNSIEFPVLILFDGHKSHINIVLHDFCVEHEILLYVLYPNTTHILQPCDVGIFHPLKIEWRKIIAQHIQSTTQSVTKFNFAQLFSAGFKNAINPKIIQSVFSACGIYPFNPKIIDYSKCISTRRQDLSNDYTPYANNQNLTNNYNTECLKIIESSMPADLLKEFKQAYDRHENPSSEELLYNIWKKLNITIEESAIDDPAINDANITAEKEDDHLDPTILPNTVSNITLDNLASESLEYDDTNLNDQTSNHFSYHDDNNNINDYINYSSKSFKKPVILESTVNNSQIHLDDTVILELKNDDNKLLLNLEGTDILESSTNDCKNNSNLKLIPIYNACNQSKQAERLIKNEKLQQEKIEKAKRNQEHMIKKELIEQEKLKRAKDKEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -