Cses015719.1
Basic Information
- Insect
- Cotesia sesamiae
- Gene Symbol
- -
- Assembly
- None
- Location
- scaffold:1711-3205[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-07 0.00015 21.4 0.0 3 36 44 77 42 83 0.86 2 2 1.5 1.6e+03 -1.1 0.0 16 23 141 148 135 150 0.76
Sequence Information
- Coding Sequence
- ATGGCTAAAAAATCAACACAATCGAAGTTGAAAAAGAAAACAAATCCTGCAAAAAATTATATAGTAACGTCTGAGAATGTAATTAAAAATTCAAAAAAAAGAAAATGTCAACGATTGAATTACAGTACAGAAAATGTTGTAAAAGCTTTAAAAGCTATAAAAGATACCAGAATGTCTTCAAGAAAGGCTGCTGTTGCCTTTGGTGTACCGGTTACAACTATAGGGAGAAAGAAAAATTTAGATCCAGGAGAAACCAAAAAGATTGGAGCGCCTGTTACCAAAAGTGAGTTATTGGACAATATCCAAAAGTATGTCAAAAAAATTAAGAAAAAAACGCCATTCAAAGACGATCGTTCTAGTCGACACTGGTACGAAAACTTTAGAAGAAGGCACCCCGAATTGTCAATTCGAAAACCCCAAAAATTGAGTATGACTCGAGCAGCAGTAACGCAAGAAGATCTTCAAGATTGGTTTGCAAACAACAAAATATATTTAGAGAGAAAAGATTTATTGAGTATTCTTCCGAGTCGAATATTTAATTATGACGAAAGTAGCATTCAGTTGTGTCCTGATGCTGAGAGTGCCCATGAAGTTACAGAAGAACAAAGATTTTTACAGGAGTTTGAAAAAAATTTACAAGAGGAACTACTTTTGGATTTTTATGCAGCAGCGAGTAGTGGATCATGGACGGGTGATGTGGAGAAGAAAGCTTTGTTTGATTATTGGTTACAAATTTACAAAAATTCAACGGGTATTTAA
- Protein Sequence
- MAKKSTQSKLKKKTNPAKNYIVTSENVIKNSKKRKCQRLNYSTENVVKALKAIKDTRMSSRKAAVAFGVPVTTIGRKKNLDPGETKKIGAPVTKSELLDNIQKYVKKIKKKTPFKDDRSSRHWYENFRRRHPELSIRKPQKLSMTRAAVTQEDLQDWFANNKIYLERKDLLSILPSRIFNYDESSIQLCPDAESAHEVTEEQRFLQEFEKNLQEELLLDFYAAASSGSWTGDVEKKALFDYWLQIYKNSTGI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -