Cses014475.1
Basic Information
- Insect
- Cotesia sesamiae
- Gene Symbol
- -
- Assembly
- None
- Location
- scaffold:2118-2666[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-08 1.9e-05 24.3 0.0 3 37 45 79 43 84 0.87 2 2 0.96 1e+03 -0.5 0.0 16 23 167 174 160 176 0.75
Sequence Information
- Coding Sequence
- ATGGCTAAAAAATCAACACAATCGAAGTTGAAAAAGAAAACAAATCCTGCAAAAAATTATGTAGTAACGTCTGAGAATGTAATTAAAAATTCAAAAAAAAAAAGAAAATGTCAACGATTGAATTACAGTACAGAAAATGTTGAAAAAGCTTTAAAAGCTATAAAAGATACCAGAATGTCTTTAAGAAAGGCTGCTGTTGCCTTTGGTGTACCGGTTGCAACTTTGGGGAGAAAGAAAAATTTAGATCCAGGAGAAACCAAAAGTAAAACTGGCCCAGGCATAGTTCTGAGTGATGATGAAGAAAAACAGATTGTTACATGGATATTACATCGAGCAGAGATTGGAGCGCCTGTTACCAAAAGTGAGTTATTGGACAATATCCAAAAGTATGTCAAAAAAATTAAGAAAAAAACGCCATTCAAAGACGATCGTTCTAGTCGACACTGGTACGAAAACTTTAGAAGAAGGCACCCCGAATTGTCAATTCGAAAACCCCAAAAATTGAGTATGACTCGAGCAGCAGTAACGCAAGAAGATCTTCAAGATTGA
- Protein Sequence
- MAKKSTQSKLKKKTNPAKNYVVTSENVIKNSKKKRKCQRLNYSTENVEKALKAIKDTRMSLRKAAVAFGVPVATLGRKKNLDPGETKSKTGPGIVLSDDEEKQIVTWILHRAEIGAPVTKSELLDNIQKYVKKIKKKTPFKDDRSSRHWYENFRRRHPELSIRKPQKLSMTRAAVTQEDLQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -