Cses000626.1
Basic Information
- Insect
- Cotesia sesamiae
- Gene Symbol
- -
- Assembly
- None
- Location
- scaffold:1-1738[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6e-11 6.3e-08 32.2 0.0 4 40 2 36 2 41 0.87 2 3 7.4 7.8e+03 -3.3 0.1 16 21 113 118 113 118 0.90 3 3 4.5 4.8e+03 -2.6 0.1 17 26 179 188 170 188 0.63
Sequence Information
- Coding Sequence
- ATGAATTTAGCTAATGCTTTGAAAGCTGTCGACACAGGTGTTTCACTGAGAAAAGCTGCTGCAATGTACGGAGTTCCCCCAACTACACTCTCTAGAAAAAAAGGGAACCCTGAAATATCCAAACAAAAAACTGGACCAGCAACTGTTTTTTCTAATACCGAAGAACAAAAAATAGTTGACTGGATTCTTTTTAGAGCTCAGCGTGGTTTACCAGTAACTAAAACAGAGCTCTTAGATTCTATTCAACAATATGTGAAAATGTTAAAAAAAGAAACTCCATTTATTGATAGTCGGCCGAGCCGACATTGGTATGAGGGCTTTCGAAAACAACACCCTCAAATGTCAATCAGGAAACCACAACATCTGACTCATAGTAGAGCAGCAGTGACCGGTGATGACCTGAAAGATTGGTTTGATGAACTAGCTAAGTATTTAACTGAAAAAAAATTATTGGAGATTCCTTCTACGAGAATTTTCAACTGTGACGAGACTTATTTTGCATTGGATGCTATGGTACAAGAAAAAAATGCTGTTATCAGTGGATTCAAAGCTGCAGGCTTGTATCCTTTCGATCCTTCTGCCGTTGACTATGATGTATTTGATAAAAGAAAGAAATCTAAAACAACAGTAACTAAAGAAAATGTACAAGATGAAGTAACAGAAGATAAGGAAAAACATCTATTAACCTTCGAAAACAATTTATCAAAGGATATTATGGAAGAATTTAATACTGCTTAG
- Protein Sequence
- MNLANALKAVDTGVSLRKAAAMYGVPPTTLSRKKGNPEISKQKTGPATVFSNTEEQKIVDWILFRAQRGLPVTKTELLDSIQQYVKMLKKETPFIDSRPSRHWYEGFRKQHPQMSIRKPQHLTHSRAAVTGDDLKDWFDELAKYLTEKKLLEIPSTRIFNCDETYFALDAMVQEKNAVISGFKAAGLYPFDPSAVDYDVFDKRKKSKTTVTKENVQDEVTEDKEKHLLTFENNLSKDIMEEFNTA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -