Cses017094.1
Basic Information
- Insect
- Cotesia sesamiae
- Gene Symbol
- -
- Assembly
- None
- Location
- scaffold:927-2645[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.6e-13 9e-10 38.1 0.0 1 40 7 44 7 49 0.89 2 3 10 1.1e+04 -3.7 0.1 16 21 121 126 121 126 0.90 3 3 3.3 3.4e+03 -2.2 0.1 17 26 187 196 178 196 0.67
Sequence Information
- Coding Sequence
- TCTACGCGTATAAATTATTCTCCTGATGATTTAGCTAATGCTTTGAAAGCTGTCGACACAGGTGTTTCACTGAGAAAAGCTGCTGCAGTATACGGAGTTCCCCCAACTACACTCTCTAGAAAAAAAGGTAACCCTGAAATATCCAAACAAAAAACTGGACCAGCAACTGTTTTTTCTAATACCGAAGAACAAAAAATAGTTGACTGGATTCTTTTTAGAGCTCAGCGTGGTTTACTAGTAACTAAAACAGAGCTCTTAGATTCTATTCAACAATATGTGAAAATTTCAAAAAAAGAAACTCCATGTATTGATAGTCGGCCGAGCCGACATTGGTATGAGGGCTTTCGAAAACGACACCCTCAAATGTCAATCAGGAAACCACAACATCTGACTCATAGTAGAGCAGCAGTGACCGGTGATGACCTGAAAGATTGGTTTGATGAACAAGCTAAGTATTTAACTGAAAAAAAATTATTGGAGATTTCTTCTACGCGAATTTTCAACTGTGACGAGACTTATTTTGCATTGGATGCTATGGTACAAGAAAAAAATGCTGTTATCAGTGGATTCAAAGCTGCAAGCTTGTATCCTTTCGATCCTTCTGCCGTTGACTATGATGTATTTGATAAAAGAAAGAAATCTAAAACAACAGTAACTAAAGAAAATATACAAGATGAAGTAACAGAAGATAAGGAAAAACATCTATTAACCTTCGAAAACAATTTATCAAAGGATATTCTGGAAGAATTTAATGCTGCTTGGTTAAATCAGACATTGCCCAGAGATCTAGAAATTAGAGGCTTGTATAAATACTGGCGTGATATCAGTGGAAAATCTGGTTCTCATGAAAAAAGTAAACCAATTGTCAAAGAAGTGACGTTGGTAAATTTAAATTTAAACATAGTAAGACAAGAACAACCCGTAAATAATTTTATTTTCAAATATAACTATATTAACAGTTGA
- Protein Sequence
- STRINYSPDDLANALKAVDTGVSLRKAAAVYGVPPTTLSRKKGNPEISKQKTGPATVFSNTEEQKIVDWILFRAQRGLLVTKTELLDSIQQYVKISKKETPCIDSRPSRHWYEGFRKRHPQMSIRKPQHLTHSRAAVTGDDLKDWFDEQAKYLTEKKLLEISSTRIFNCDETYFALDAMVQEKNAVISGFKAASLYPFDPSAVDYDVFDKRKKSKTTVTKENIQDEVTEDKEKHLLTFENNLSKDILEEFNAAWLNQTLPRDLEIRGLYKYWRDISGKSGSHEKSKPIVKEVTLVNLNLNIVRQEQPVNNFIFKYNYINS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -