Cses008753.1
Basic Information
- Insect
- Cotesia sesamiae
- Gene Symbol
- lolal
- Assembly
- None
- Location
- scaffold:39-2630[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.2 9.7e+03 -3.6 0.0 27 34 121 128 121 129 0.88 2 2 6.3e-13 6.7e-10 38.5 0.1 2 43 356 397 355 399 0.91
Sequence Information
- Coding Sequence
- ATGGGATCAACAGAGCAGCATTACTGTTTACGATGGAACAACCACAAATCAAACATGATGACAGTTTTCCAAGAGCTGTACTACGACGGTACCCTGACCGACGTCACAATAGGTTTGTCAGATGGATTGCTGGTGGAATGTCACAAGCTGGTGCTAGCAGCTTGTTCTCCATACTTCAGAAAAATTCTGCAAAATATAAACCGACCTCGGGCATTAATCCTGGTCAATGTAAAGTACTACCAGATGAAAGCGCTGCTGCGATTTATGTACCACGGAGAGGTGACGATTTCTTCAGAAGAAATGCCGGAGCTGCTGCAAATAGCGAATTATTTAAAAATAAAAGGATTAGTGGAGGGAGCAGACATACCTGACTCGTCTCTGAGATCATCCTCGTCGATCGAGCAGACCCAGCATCCCCTGAAGCAGTCGCAGTCGGAGGATCATCATCATCAACAGCAACGTCGGTCTCGCCGTGATCGACACGCGAGTCTTTCCCCTCCGCCGATCAGCCGCAGCCACCCGAACTACCTGCCCAGCATGGACCGGAATGGAAGCATTGATTACATGTCGCCGCCACACTCCACCAGCTCGCCCTACTACGTCCATCACAAGACCTCGCCCGGGCGCAGCTACGATGAACGGTTTCCTGGAGTCAACGCCTGGAATCTTCACTACGGGCCCCACTTTGCTGCTTCTTTCAATGGATCCTCAGTCTCTGCTCACCACTCGCAGCTATTACCAGCTGCTTACGACGAAATGGCCCTTTGCAAGAGCAAAATGCAGAACCTCAACATGGGCCGTGATACTCCAATCCTCAGAACTGTTCTTGGGCAGGGCAATGCTGATAGCTCTAAAGCTGCATCACTTTTTCATCCAGATAATCAGGAGCACAAGAGTCCCAGCAGTCGATCTGCTGGTGATCTTACGGATAACAAGCGCAACGGCGGTGGTAGATCACAAAATATCAGTCCTTATGATCCAGCTGCTCGTGATACTGACAAAAAAACGAGAATTCGTACCAATGGTGACTCAACCCGCGAATGGAAACGCTACAAGCAGTACACAAAGGAGCACATAAATTCCGCGATCCAAGCTGTAAGAGACGGTATGAGCGCTTTGCAAGCAGCAAGAAGATTTGGAGTACCCTCACGAACGCTCTACGACAAAGTAAAGAAGATGGGAATCGCTAATTCAAGATCGATGCGCCGCAGCAGCAGCAACAACAACAACAGCGGAGCCAGTTTTCCATACGGAATCGGCTGCAATAAAAACGGGAGCATTTACGCATCGCATTCTGAAAATGATTTCGCGAACAATTCAGGTGTCTCCGAGACCCCAGACACAAAAATTAAAGCTTCATACGAAAAGAACAAAGAAAATTCTGTCGACCGGGAGTCAGCGACGATGGAGCTGTCCCGGGTGACACCGAGTCCCAGCCCGAATCGGTCGGTCCACAGTGCTCGTCTTCCAGAACCCGATGAGGATCAGGACCAGGTCGAAGATCTCTCGATGAGCAGTAAAAAGTCTGATATTCGTGTAATAGTATCTCCTGTCATCAAAGAAGAAAAAATCGATCCAGATAATTTTGGTAACAAATGA
- Protein Sequence
- MGSTEQHYCLRWNNHKSNMMTVFQELYYDGTLTDVTIGLSDGLLVECHKLVLAACSPYFRKILQNINRPRALILVNVKYYQMKALLRFMYHGEVTISSEEMPELLQIANYLKIKGLVEGADIPDSSLRSSSSIEQTQHPLKQSQSEDHHHQQQRRSRRDRHASLSPPPISRSHPNYLPSMDRNGSIDYMSPPHSTSSPYYVHHKTSPGRSYDERFPGVNAWNLHYGPHFAASFNGSSVSAHHSQLLPAAYDEMALCKSKMQNLNMGRDTPILRTVLGQGNADSSKAASLFHPDNQEHKSPSSRSAGDLTDNKRNGGGRSQNISPYDPAARDTDKKTRIRTNGDSTREWKRYKQYTKEHINSAIQAVRDGMSALQAARRFGVPSRTLYDKVKKMGIANSRSMRRSSSNNNNSGASFPYGIGCNKNGSIYASHSENDFANNSGVSETPDTKIKASYEKNKENSVDRESATMELSRVTPSPSPNRSVHSARLPEPDEDQDQVEDLSMSSKKSDIRVIVSPVIKEEKIDPDNFGNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00381997; iTF_00378661; iTF_00378980; iTF_00379764; iTF_00379537; iTF_00377917; iTF_00378155; iTF_00380480; iTF_00380210;
- 90% Identity
- iTF_00381997; iTF_00378661; iTF_00378980; iTF_00379764; iTF_00379537; iTF_00377917; iTF_00378155; iTF_00380480; iTF_00380210;
- 80% Identity
- iTF_00381997;