Cses008089.1
Basic Information
- Insect
- Cotesia sesamiae
- Gene Symbol
- ttk
- Assembly
- None
- Location
- scaffold:2-3457[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.2e-16 5.4e-13 48.4 0.0 2 42 363 404 362 407 0.94
Sequence Information
- Coding Sequence
- ATGAGTATGCAGCAATTTTGTCTAAGATGGAATAATCATCAACCGAACTTCATATCAGTGTTCTCAACTCTGCTAACAAATGAAACTTTGGTTGATGTGACATTAGCTGCCGAAGGCCGGCATTTACAAGCACATAAAGTGGTATTGTCAGCCTGCAGTACATATTTTCAATCATTGTTCACTGTTAATCCATGCCAGCACCCTATTGTTATATTAAAAGATGTTAAATTTTCTGATTTAAAAATTATGGTTGATTTTATGTACTACGGTGAAACTGCTGAGAGTCTGAAAATAAAAGGACTCGCTGAAATGCATCCAGCAACACTAACCAAGTGGCCAAGTGGAAGCAGTGACCCTAGCGGTGGAGACCGTGGTGAATCATGTTCACCAACTCCATCGCCAATGTCGCCGTCATTTCGACGCAAGAGACTGAGAAAATCGTCAACTGGTTCGGCATCTGGATCTGGCGATAAACAAAACGAAGAAATGAGCGAAATAACACTTGTTGCCACAAATGTTGTTAAACCCGAGCCACTGATAGTGTCACAGGAGAACCGCGATAATATAAGACGTCCAGTTAATACCAGTACTGAGTCACAGGGAAGCATTGATGAAGATCAAATATCTATTATGAGTAATATGGAAAGTAGTACAGCGACAACACTCGCTCAAAGTGAAGGCTCTGTGCACGATGTAAGTCAACAATCTGGGGCAAATGCAGGCCAAAGTTCATCACTCTCGTCTCAAGCACCAGCACATCAAGGATTGCAATGGACAATCATGGAGCATACGTATCCACGTTTCGCTCTATCCTCGTGTCAAACGAATCTGTCGATTCAAGCATCATCGGCATTCACGACGCCAGAAATATCCGCGTCATCGAGCACCAACGATCAGTACCCGGGTACCAACACCACTGGTTCTAGTTGTGCTATGAACAGCTACCCAGGATCACCACACGGATTGCAGCATACTTCATCTTCAGGCGGTTTATCACCCTCCGGTCAATGTTCAAATAGCTGTCAGAGCCCCTGTGCCAGTCCTCAAGCGACAGTTAAACGAAAAAGGTCCACCAATCCGCAGGCTGATGAGAATTTTATTCGAGCACTGGACGCTGTTCGCTACGGCGGGATCGGATTCTGCAAAGCTGCCAGGATGTTTGGTGTGAACAATCGGACCCTGTGGCTGGAGTACAAAAAACGTGGCTATCCAAATAATCGACCGAGTGTTAAATCAAAAGTCAAAAACGAGTCGAATTCATCGCCACCTTCTCCTCCAGTTCCACCACCTGTTGAACCGCCAAGTCCATCTTCCATGGGTCCACCGACTACTCCTCTGAGTACTCACAGCGCACACAGCTCTCACAGTGTTCACAGTGCTCACAGTACTCACAGCCCTCACAGCGCTCATAATATTCACAATACTCATACCATGATACCCACCCACACGCCTCACGCAATGCTCGGCGGTTACGTTGACACTAGACATATTGATTATTCACTATCCAATCCATCTATGCCTATCAATTTACACGGTGTTAATTATAATGCCATGTGA
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVFSTLLTNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGETAESLKIKGLAEMHPATLTKWPSGSSDPSGGDRGESCSPTPSPMSPSFRRKRLRKSSTGSASGSGDKQNEEMSEITLVATNVVKPEPLIVSQENRDNIRRPVNTSTESQGSIDEDQISIMSNMESSTATTLAQSEGSVHDVSQQSGANAGQSSSLSSQAPAHQGLQWTIMEHTYPRFALSSCQTNLSIQASSAFTTPEISASSSTNDQYPGTNTTGSSCAMNSYPGSPHGLQHTSSSGGLSPSGQCSNSCQSPCASPQATVKRKRSTNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSVKSKVKNESNSSPPSPPVPPPVEPPSPSSMGPPTTPLSTHSAHSSHSVHSAHSTHSPHSAHNIHNTHTMIPTHTPHAMLGGYVDTRHIDYSLSNPSMPINLHGVNYNAM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00379536;
- 90% Identity
- iTF_00382001; iTF_00379736; iTF_00379536; iTF_00380985; iTF_00381189;
- 80% Identity
- iTF_00382001;