Cses006171.1
Basic Information
- Insect
- Cotesia sesamiae
- Gene Symbol
- bab1
- Assembly
- None
- Location
- scaffold:4945-11383[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9e-11 9.5e-08 31.6 0.0 2 35 48 82 47 88 0.91 2 2 8.3e-09 8.7e-06 25.3 0.0 1 25 180 204 180 204 0.93
Sequence Information
- Coding Sequence
- TTGTTTCAGGCCAAGTTGTTGGAATCATCCCACGCTTGGCTCGGCGCCTCCACCTCCAATATATCAGACAAAGTCCCCACTGCTCCCTGTATTCTAGCCGACTATTCGAGCCTGCTGAAGCTGAAGGCGCCGACGTGGACGCGACAAGACCTTCAAGACGCAATAGAAGCCGTGGTCACCCAGAAGATGAGATTCACCCAAGCTTCCACAAAATACGGAATCCCCAAAGGCACTCTCTACGACAACATACTCGGCAAGTCGAAGAGAATGATGGTGCTCGAAGAAGCTGGACTTGATGCCAATGAAGAGAATGCGGTCCTTGAATTCTGTTGTGACATCACCGTTAGTCCTTATAATAGACGAACCAAAAAATCGCTGAACGCTATTTTAAATTTCGTTGAAAAATTACGCAGGCGTCGTGATCCAGCAGATAGCTATCAGTATCAACTGCAGTCGCTCTGGCAGAAGTGTTGGAACACTAATTCTGGGCTGGTGCATAATCTGCGCTTTCGTGAACGTGGACCACTTAAGTCATGGAGACCGGAAACTATGGCTGAAGCGATCTTCAGTGTTTTGAAGGAAGGGCTATCGTTAAGTCAAGCTGCGAGGTTAGTTTTCTTAATTGATATTATTTATACTGTTTACTTTAAATCGATTTCGTTAGAAACT
- Protein Sequence
- LFQAKLLESSHAWLGASTSNISDKVPTAPCILADYSSLLKLKAPTWTRQDLQDAIEAVVTQKMRFTQASTKYGIPKGTLYDNILGKSKRMMVLEEAGLDANEENAVLEFCCDITVSPYNRRTKKSLNAILNFVEKLRRRRDPADSYQYQLQSLWQKCWNTNSGLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARLVFLIDIIYTVYFKSISLET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -