Basic Information

Gene Symbol
Xbp1
Assembly
None
Location
scaffold:43037-47335[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2e-12 1.9e-09 37.4 16.8 2 64 87 149 87 156 0.96
2 2 0.98 9.2e+02 -0.1 0.0 34 49 216 231 214 238 0.84

Sequence Information

Coding Sequence
ATGATTTCGCCAAAAAGTGTCATTATTACGTTGCCTAAAGGGCTTCAAAAATCACCAGTGATTAGCCCGGTGCGTAATATTATTAAGCCGACTGGAAATTTAAATTTTACGACATCTATTCTTGCCACAAAGTCGAAGGTTGACGCGAAGAACATGCAGAAAATTCAGCATGATTGTTATGGTGATATTCAGGGTGAGCTGATGAAAACAGACGTTTGGCTGAGAGGAAAAAAACGAAGGCTTGATCATCTTTCATGGGAAGAAAAACTTCAAAGAAAAAAACTAAAGAACCGAGTTGCTGCCCAAACATCCAGAGACCGTAAAAAAGCAAAGCTTGATGAACTGGAAGAAACAGTAAGAACTTTAATAGAAAAAAATGAACTAATCGCAGAAGAGTGTGACAGTCTGAGAGCGCAAAACAAAGCATTACTTGCGGAGAATCAAAGGCTAAAAGAAGGAGATAAAAGCGTTAATAAAACTGATTCAGATCGGTATTGCTCAATGTGCATGGGTCGTGTCGGTTGGTGGGGCAACTCAACTGGCACTGTCCCTAACACCGTCAGCAAGTGCGGAAATTCTGTTGAAGATATTGACGCTTTACCTCCTCTGGAGGAACTCTTTGCTGACATCCAAAGTGATGGCTATGTCGAGCGACTCGAAGAACTTGCAGAAAGTCTTCTGCGAGAAGTTACCGCTGGCGTGGAAGCTCATGCTCAGAGACCAAATGAACAGGTCACCATCAAGAAAGATACCTTTGAAGAATTTGATGATTCAAAAAAAATGGTGGGGCCGGCATCAAAAAATGTGGAAGCCAGTCCAATCTGCAGTAGCTTAAATCTATATCCCAAAGAGTCAACTCCTTTCCCCGCTCAATATGTTGATAAATCTTCAATACCAGAATTATTTAAACGTCAAGTTAAAATCAAGCAAGAACCAGTGAGCGATGTTGACACTGTTTATGGGACTTACGATGAGGCTACTAATTGTATAACTATTATTTATCCTGGAGAAGATGATGCTATCAGAATAGATGAATGTGTCCAAGAAGTCAGCAGCGATGAATCCGCTAATTTAACACCTAATTATTACAACAATGTTTCACCTGCTTACTCAATAGCAGACTCTATGTCACCCTCTAGCATGCATTCTGATGATTCTGATGCTAATTCTGTATGTTATAAAATGAAATCTAATATCTCGAATTGTGGATACGAATCTCATGATTTTCCGCAAGCTGAAAGGCATACTGACACTGCAGCACTCACAGATTTATGGCACGAAAGTTTTTCGGAATTATTTCCTAGTCTTGTTTAA
Protein Sequence
MISPKSVIITLPKGLQKSPVISPVRNIIKPTGNLNFTTSILATKSKVDAKNMQKIQHDCYGDIQGELMKTDVWLRGKKRRLDHLSWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEETVRTLIEKNELIAEECDSLRAQNKALLAENQRLKEGDKSVNKTDSDRYCSMCMGRVGWWGNSTGTVPNTVSKCGNSVEDIDALPPLEELFADIQSDGYVERLEELAESLLREVTAGVEAHAQRPNEQVTIKKDTFEEFDDSKKMVGPASKNVEASPICSSLNLYPKESTPFPAQYVDKSSIPELFKRQVKIKQEPVSDVDTVYGTYDEATNCITIIYPGEDDAIRIDECVQEVSSDESANLTPNYYNNVSPAYSIADSMSPSSMHSDDSDANSVCYKMKSNISNCGYESHDFPQAERHTDTAALTDLWHESFSELFPSLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01004826;
90% Identity
iTF_00379396; iTF_00378484;
80% Identity
-