Basic Information

Gene Symbol
ATFC
Assembly
None
Location
scaffold:6005-12382[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.1 6.7e+03 -2.8 0.2 40 59 50 69 45 71 0.56
2 3 6.7 6.3e+03 -2.7 0.9 6 17 315 326 312 327 0.79
3 3 3.5e-13 3.3e-10 39.8 6.0 2 63 329 390 328 392 0.95

Sequence Information

Coding Sequence
ATGTCATTACACGAGAACTGGATATGGAAGGCGGAGCCGGATTCCCCTAGTGGGGCTTCAATAGGTGAAGCCGAAGACGATTGGATCTATATCGACCATCAATCCTCAACATTAGTAAACGATGTCCTTGAACCTGAATTATACGACGAAAATCCAACGCGTGCACAAGTTGCTAGCAAACTTTTAGAGCAATTGGATGAATTAGTTAAAGAAGAGCCCTTACCTGGTTGGTTTGAAGATCGACCAGAATCATTGTTTGATGAATTATCAACATCAGAATGTATTCCAAACAAGCCAGTGGTTTATTCTCAACCACAAGCGCCAGTACCAGAATCATTTTTACAAGAATGGGAAACTGTTTTTGGGGGTGTAGAATCATCATGCCAAATGATTTACCCCTCAGGCAGTTCAGCTTTGACTCCGCCGCAGTCACCACCGTACATACATTCTGACTCATTGTCAGTTGATTCTCAGCAGATTCTTGTTAATTTAGATCCAACAGCTTTGTCTATTCAATTTATATATCCATCTATTGCTCATAATGCTGTAATTCCCCCTTCGATTAATCTAATTAATCAACAAGAACAACATCACCAACAGCAGCAGCAGCAACAACAACAGGAGCAGCAACAGCAAGTGATTGAAGAAGAATCTGTTGATAAAAGTGATACCTCATATCTTGGTCAAATATCTGGCGAATGGAATGCTGAAAATGTGTCATTGTTACCACTAGCAGGTGATGTAGCAAGTGAATTAGCAGTTGTTGATGAATATGTTAGATCATGTGTCGAATCAATGTCACCAACAAGTCCGATAAATAGCACCGTCAGCAGCTATTTGTCCTCCGAAGATTCAGTTGATGATCCTGATTGGACTCTAGATTCATCTACCAGCAGTAGCAAGGCTAGCAGTAGGAACAGCAATTATGGCAAACGTAATCAGAAAACAACCCGAACTCGCAATAAGCCCTATGCACGTTCGATCGATGATAAAAAGAATCGTAAGAAGGAACAAAATAAGAATGCAGCTACGCGTTATCGTATGAAAAAGAAGCTTGAAGTTAAAGAGATCGTTAGCGAACAAGATGAGTTAGAAGAAATCAATGGTAAACTCAAGGATCAAGTTTGTGAGTTGAAGCGAGAGATCGGATACTTGAAAGGGCTTATGCGCGATTTATTTAAGGCTAAGGGTTTAATCAATTAA
Protein Sequence
MSLHENWIWKAEPDSPSGASIGEAEDDWIYIDHQSSTLVNDVLEPELYDENPTRAQVASKLLEQLDELVKEEPLPGWFEDRPESLFDELSTSECIPNKPVVYSQPQAPVPESFLQEWETVFGGVESSCQMIYPSGSSALTPPQSPPYIHSDSLSVDSQQILVNLDPTALSIQFIYPSIAHNAVIPPSINLINQQEQHHQQQQQQQQQEQQQQVIEEESVDKSDTSYLGQISGEWNAENVSLLPLAGDVASELAVVDEYVRSCVESMSPTSPINSTVSSYLSSEDSVDDPDWTLDSSTSSSKASSRNSNYGKRNQKTTRTRNKPYARSIDDKKNRKKEQNKNAATRYRMKKKLEVKEIVSEQDELEEINGKLKDQVCELKREIGYLKGLMRDLFKAKGLIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00378483;
90% Identity
iTF_00380065;
80% Identity
-