Basic Information

Gene Symbol
PAF1
Assembly
None
Location
scaffold:22047-27783[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.5e-14 8e-11 41.8 6.1 5 65 628 688 624 688 0.95

Sequence Information

Coding Sequence
ATGGCTCCAACAATCCAAACTAATGGAACTCCAACTGATCGCGAAAAGCGTCCAACAAGGCCCGTAGAAAAAAGACGTCTGCTAACTTTAGTGTCATTTAATTTTAATTATAAATCAGAATTAATTTGTCGGGTGAAATATTGCAACACATTACCAGACATACCATTTGATCTAAAGTTCATCAATTATCCATTTGAGTCGACGAGGTTCATTCAGTATAATCCGACATCGCTAGAGCGTAATTACAAGTATGAAGTTCTGACAGAGCATGATTTAGGTGTTGAAATAGATTTGATTAATCGCGATACTTATGCCGGCGATCCGAACGCCCAATTAGATCCAGCAGATGAAAAATTACTCGAAGAAGATGTTCTCACACCGCAAGACTCGAAAAGATCTCGGCATCATGCGCGCAGTGTATCTTGGTTGCGAAGAACTGAATATATTTCTACAGAACAGACAAGATTCCAGCCACAAACGATGGATAAAGTTGAAGCTAAAGTCGGTTTCACTTTAAAGAAAAACTTCAAAGAAGAAACCTTATATATGGACCGTGATAGCCAGATAAAAGCTATTGACAAAACCTTTAAAGATAACAAAATACCCATTGAAAAGCATTATAGTAAATCTGGTGTTGTACCAGTGGAGGTATTGCCAGTATTTCCAGACTTTAAATTGTGGAAATATCCTTGCGCTCAAGTTATCTTTGATTCTGATCCTGCGCCATCAGGAAGACCTGTACCAGCTCAGATTGAAGAGATGTCTCAGGCTATGATTCGTGGTGTGATGGACGAAAGTGGTGAACAGTTTGTCGCTTACTTCCTACCGCTTGAAGAAACTATGGAAAAACGTAGAAGAGATTTTGCTGCGGAAATTGAGTATGCAGATGATGAAGAATACGAATACAAGATGGCCCGAGAATACAACTGGAATGTAAAGAGCAAATCATCTAAAGGATACGAAGAAAATTATTTCTTAGTTATAAGAAACGATGGCACTATTTATTTTAAACAGACTAATACATTAGATGTGTACTACAATGAATTGGAGACCCGTGTACGACTCAGTAAACGTCGTCAAAAAGCTGGACAGCAGCCGAATAATACACGCCTGGCTGTAAAACATCGACCACTGACGGCCAGCGAGTTTAAGATGCAGCGTTACCGTGAAAAACTACTTGAGCCACCAAACGAAGATGAAGAGGAAGAAGAAGAAGAGGATGAAGACGAAGACGACGAACAAGAGCAAGAAAAAGCTGAAGACAAGACAAATGATCAAAACGATCTCAATCCAGATCACAATCTCGTTCCCGGTCTCCTTCTCGATCTAGATCTCGCTCTCGCTCTCGTTCTCGCTCTCGGTCAAAATCAAAGTCCGCGAGTCCAGCTAAATCAAATCGATCGGGTTCGGCGACTCCCCAATCACGGAGTCCGTCAAAATCTCCATCAAAATCACGATCGCCTTCACCGGCAAAATCTCAATCACGATCGTCATCAGCATCACCGGCACGATCAAGATCTGCCTCAAAGTCTAAGTCACGATCTCGATCACCCTCAAAGTCGAGGTCTGCCAGCGGAAGTGGTAGTGGAAGTGGCAGCGGCAGCAGTGCTAGTGGCTCTGAAAGCGATTAAATCGCTAGATTTACTTCATTCTTTCATTGTAGATAACACGGTACAGTTATGTGCAATAAGAATTTACCACGCGCCAGATCGAACACGCGATGTTTTATTTGTTATTATTTCGCATCAAGGATTGCGTCATTCTTCAATCCATAATCTATTTTATCTTAATACACCTACAATCATGGCTCCGAAGAACAAAGAAAACACAAATAATCGGAAGAAAAAACAAAGCGAAGATGATGATGATGATGATGTTGATTACCGTCGACGACGTGATAGAAATAATCAGGCAGTAAAACGATCACGAGTAAAAAGTAAATTGAGAACACAGCAGACATTAGAGCGTGTTAATCAATTAAAAACAGAAAATGAATTATTAGAAGAAAAAATAAAAATGCTTTCTAAGGAATTGGGTTTCTTAAAAGATTTATTTTTAGCACATGCAGGCTCGAATTCAAATCCCGCAATAAATCTTCAAGATATAGATATAAATGCCATTTTAGCAAATGATTCAGAGGCTGATCACAAGAGCAATACGAAAGCTGATACGTAA
Protein Sequence
MAPTIQTNGTPTDREKRPTRPVEKRRLLTLVSFNFNYKSELICRVKYCNTLPDIPFDLKFINYPFESTRFIQYNPTSLERNYKYEVLTEHDLGVEIDLINRDTYAGDPNAQLDPADEKLLEEDVLTPQDSKRSRHHARSVSWLRRTEYISTEQTRFQPQTMDKVEAKVGFTLKKNFKEETLYMDRDSQIKAIDKTFKDNKIPIEKHYSKSGVVPVEVLPVFPDFKLWKYPCAQVIFDSDPAPSGRPVPAQIEEMSQAMIRGVMDESGEQFVAYFLPLEETMEKRRRDFAAEIEYADDEEYEYKMAREYNWNVKSKSSKGYEENYFLVIRNDGTIYFKQTNTLDVYYNELETRVRLSKRRQKAGQQPNNTRLAVKHRPLTASEFKMQRYREKLLEPPNEDEEEEEEEDEDEDDEQEQEKAEDKTNDQNDLNPDHNLVPGLLLDLDLALALVLALGQNQSPRVQLNQIDRVRRLPNHGVRQNLHQNHDRLHRQNLNHDRHQHHRHDQDLPQSLSHDLDHPQSRGLPAEVVVEVAAAAVLVALKAIKSLDLLHSFIVDNTVQLCAIRIYHAPDRTRDVLFVIISHQGLRHSSIHNLFYLNTPTIMAPKNKENTNNRKKKQSEDDDDDDVDYRRRRDRNNQAVKRSRVKSKLRTQQTLERVNQLKTENELLEEKIKMLSKELGFLKDLFLAHAGSNSNPAINLQDIDINAILANDSEADHKSNTKADT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-