Basic Information

Insect: Cotesia rubecula
Gene Symbol: stc
Assembly: None
Location: scaffold:394-6250[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1 2.3e+04 -4.3 1.6 15 19 502 506 501 506 0.81

2 15 0.04 9.2e+02 0.3 0.4 4 10 535 541 534 541 0.95

3 15 2e-06 0.046 14.1 10.4 4 18 552 566 550 567 0.92

4 15 5.6e-08 0.0013 19.1 15.9 1 18 603 620 603 621 0.97

5 15 1 2.3e+04 -4.2 1.4 7 13 625 631 625 632 0.72

6 15 1.2e-09 2.8e-05 24.4 14.8 1 19 659 677 659 677 0.98

7 15 0.51 1.2e+04 -3.2 0.7 5 10 706 711 706 711 0.94

8 15 7.7e-07 0.018 15.4 12.7 4 18 724 738 717 739 0.86

9 15 0.77 1.8e+04 -3.7 2.0 5 10 768 773 768 773 0.93

10 15 0.0022 49 4.4 11.6 1 11 779 789 779 801 0.88

11 15 1.2e-08 0.00027 21.2 15.2 1 18 806 823 806 824 0.97

12 15 0.13 3.1e+03 -1.3 0.6 5 10 852 857 850 858 0.92

13 15 1 2.3e+04 -5.7 9.8 10 19 871 881 860 881 0.78

14 15 5.5e-07 0.012 15.9 13.1 1 16 917 932 917 943 0.86

15 15 5.6e-07 0.013 15.9 14.1 1 19 949 968 949 968 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1	2.3e+04	-4.3	1.6	15	19	502	506	501	506	0.81
2	15	0.04	9.2e+02	0.3	0.4	4	10	535	541	534	541	0.95
3	15	2e-06	0.046	14.1	10.4	4	18	552	566	550	567	0.92
4	15	5.6e-08	0.0013	19.1	15.9	1	18	603	620	603	621	0.97
5	15	1	2.3e+04	-4.2	1.4	7	13	625	631	625	632	0.72
6	15	1.2e-09	2.8e-05	24.4	14.8	1	19	659	677	659	677	0.98
7	15	0.51	1.2e+04	-3.2	0.7	5	10	706	711	706	711	0.94
8	15	7.7e-07	0.018	15.4	12.7	4	18	724	738	717	739	0.86
9	15	0.77	1.8e+04	-3.7	2.0	5	10	768	773	768	773	0.93
10	15	0.0022	49	4.4	11.6	1	11	779	789	779	801	0.88
11	15	1.2e-08	0.00027	21.2	15.2	1	18	806	823	806	824	0.97
12	15	0.13	3.1e+03	-1.3	0.6	5	10	852	857	850	858	0.92
13	15	1	2.3e+04	-5.7	9.8	10	19	871	881	860	881	0.78
14	15	5.5e-07	0.012	15.9	13.1	1	16	917	932	917	943	0.86
15	15	5.6e-07	0.013	15.9	14.1	1	19	949	968	949	968	0.97

Sequence Information

Coding Sequence: ATGATTCGGAGAGTTTCTACCAGATTAAACGACTCCGTGACAAAAACTGGTGGTCGCAGTCTAGAAAAAGACTTATCAGGGGCCACAATGGCCACCTGGGACGGCTCCTACCCAGGCGATGCTCAGGATGACGGTAAATCGTACGACTATTCAAACTCACAAAACCGAGTGACAGATGACCGTTCTTGGAACCAGGACAACAATCAATCAGCTCCAGCTGCTAATAATGTCGACAATAATCAACCAAGTGCAACTAATCCCTCGTCATCTACAGAATTAAATACTTCTGAGAGTTCAACTTGTTACTTTGAAAATAATCGACAGTCCCAACCATCATCAAGTAAACCCGATTCTAATTCCCTGGTTACAAAATCCAACTTACACCCAGGAGCAAGTGAGTTTATTCCATCTGGTATTAATAATCAGCCGACTGCGTCATCGAAGGTATTTTTTTCTGACAACAAAAATAAAAACTACGGCCGTAAGTACGACAAAAAAAATAATACTAACTACCGTCAAGACGGAGATTATTATCAGAGAAATTCTTATAAAGCCTATGACAAATCTAGGAAGAATAACTTTACTAATAGTAATACAAATAATAGCAACAATAATCCATCTTATAATTATAGTAATGACTACGAACCTTATAAAGATTATTCTAATGACGTCAGCTTTGATAATAAATCAAGTAATAATAGCAAAAATGCAAGCGCTAATTCTTCTGGTAGGTACAATAATAACAATAATAACAGAAGCCCAAGAAGCCACGGAAGATATAATAACGACCGATATTCTTCAGCAAATCGTCAATCTAATTTAAATTCAAATGATTATCAAAATACTAGTAATAATTTAGAAAACAGGCCTAGAAATTTAAATCAAAGTAGTTATAATTATGATAATAGCAAAGATTCTGGAGATGTTTCTCAGAGTGATAGACATTTAAAAGGAAAGCAAACTCTGAGCAGAGATCCTCGTGATGAAAGATACCGTGGATTTGCTGGTGATAGCTCGGATGATAGACAGATGTTGAAAAAAGACAAGCGACGGGGTAAAAATAATAAAAATTTTTATGATGATCCACGAGATGAAAGATATAGAAACTCTAGCAGGCGCAAGGGAGATTATTCTGATTATTATGAAGAAAAAGGTTACAGAGATAAGAATCACCGTGATAATAAATCGGAAGTTAGGCAGTTTAGGGAAGAGAGTGTTGGTAAGGAAGAGTTTGTTCAAGAAGATAAATTAAATAATTGGCGGCTGAAGAATAGTCCAGTTAAGAAGAATATTAGCAAGAAAAGATTGGAGCTAGATGACGCTGCGACGCAGAAGGAGTGTCTTACCGAGCAGCTGAACAGAGGACACCTTGAGTGTCTTGTCTGCTGTGAAAATATCAGACAGAATGACGCAGTCTGGTCTTGCAGTAACTGTTATCACGTTTTGCACTTGAAGTGTCTGAAGAAATGGGCAGAGTCGTCCCAGAGCGAGAGCGGTTGGCGCTGTCCTGCTTGTCAGAACATAAACTTGGTTGTTCCTGAAGATTATTACTGCTTTTGTGGCAAGACTAGAGATCCTGAGTGGAACAGGCAGGACGTTGCTCATTCCTGCGGCGAAGTTTGCGGCCGTACTCGCGCTAAAAACAACTGTGTTCACAAATGTACGCTACTTTGTCATCCAGGATCGTGTCCGTTGTGCCTGGTGATGGTGAACCGCTCCTGCGGTTGTGGGAAGACATCACAGAGTTGTAAATGTAGCACAGACACTCTACTGTCCTGCTCAGCTACTTGTGATAAATTGCTGAACTGCGGGAAGCACAAATGCGAGAAAACTTGCCATCATGGTAATTGCGAGGCTTGTGATAAGAAAGTAGAGCAGAATTGTCACTGTGGGAAGAAAAGCCGATTTGTTGATTGTTTAAAAGACACAGAGCCTTTTTATTCTTGTGGAGAAGCTTGCAATCATTTGTTGGATTGCGGTAATCATAATTGCAGTGATATTTGCCATCCTGGACCATGTGGCTCTTGTTCGCTTAATACTAACCTGGTGACTCACTGCTGTTGCGGACAAACTCCGCTGACAATAAAACGTGCAAATTGTCTGGATCCAATTCCGACTTGTGATAAAATTTGCTCGAAAAAATTAAAATGCGGACAGCCAAGCTCTCCTCATTCTTGCAAAGCTTCTTGTCATGTTGGAGATTGTCCTCCGTGTGATTTGACAACTTGGGTCAAATGTCGGTGTGGTAATATGGACCGGGAGATTCCTTGCTGCGATTTGACGACAAAAGCTGACGATGCAAGGTGTGAAAAAAAATGCGCTAAAAAACGCTCCTGTGGGAAGCACAAGTGCAATCAACTTTGCTGCATTGAGATTGAGCACATTTGTCCATTACCGTGTTCAAAAACTCTGAGCTGTGGTAAGCACAAGTGCGAGTTGACTTGTCACAAAGGCAGGTGTCATCCTTGCTACATGAGCAGCTTTGATGAATTGTACTGCGAGTGTGGAGCTGCTGTTATTTTTCCACCTGTGCCTTGTGGTACTAGAAGACCCACGTGTTCTCAGCCGTGCTCTCGCCAGCACTCTTGTGGTCATCAGGTACTTCATAATTGTCACAGCGAAGCTTCTTGTCCTCCTTGCACTGTGTTGACTCAAAAGTGGTGCTACGGAAAGCATGAATTAAGGAAAGCTGTACCTTGCTACTTCAATGAGATATCTTGTGGAATGCCTTGTAATAAGCCGGTGAGGTGTGGCAGGCACAAGTGCATCACTCTATGTCATCCCGGGGCTTGTGAGAAGCCCAAGCAAGTTTGTGTCCAGCCTTGCACGGTTCCTAGGGAAATTTGTGGCCACAATTGCGCAGCTCCGTGTCATGATGGCAAGTGTCCTGATACTCCTTGTAAGGAGATGGTCAAGGTGACCTGCACTTGTGGGAATAGATCCATGACTAGGGCTTGTGCGGAAAATTCTAGGGAGTATCAGAGGATTGCAAGTGGAATTCTTGCTAGTAAAATGGTTGACATGCAGCTGGGACACTCGGTTGACTTGGAGGAAGTTTTTGGTCAGGGCGCGAGGAAGCAGAATCAACTGAGGACTCTTGAGTGTAATGAAGAGTGCAGGACTATTGAGAGGAACAGGAAACTTGCTCTTGGGTTACAGATTGTTAATCCTGATCTCAGTGGGAAGCTCATGCCACGCTACAGTGAATATATGAAGCAATGCGCTAAGAAGGATCCGCCTTTTTGTAAGATGATTCATGATAAGTTGACGGAGTTGGTACAGCTTGCTAAAACTTCTAAACAAAAATCCAGGAGCTATTCTTTTGATAGTATGAATAGGTGTAAGAGACAGCTTGTTCATGAGTATTGCGAACATTTTGGGTGCGAAAGTCAGGCTTATGATGAGGAACCTAAGAGGAATGTTGTAGCTACTGCGATTAAAGATAAGTGCTGGTTACCAAGTTACAGTCTGTTAGAAATAGTTCAGAGGGAAAATGGTCAACGTAAAGTGCCAAGACCATTGTTAAATTCTGTTAAAACTGCTACACCAGGAACATCAGAAGTTCTACCATCAACTGCCAGCAAATCTCAAAAATTACCAACTCCCACTTGGAGTACTTCTAAATCAACAGAACTAGAAATAGACTATTTTGACTATCCAAATCCTAAATGGAAGTAA
Protein Sequence: MIRRVSTRLNDSVTKTGGRSLEKDLSGATMATWDGSYPGDAQDDGKSYDYSNSQNRVTDDRSWNQDNNQSAPAANNVDNNQPSATNPSSSTELNTSESSTCYFENNRQSQPSSSKPDSNSLVTKSNLHPGASEFIPSGINNQPTASSKVFFSDNKNKNYGRKYDKKNNTNYRQDGDYYQRNSYKAYDKSRKNNFTNSNTNNSNNNPSYNYSNDYEPYKDYSNDVSFDNKSSNNSKNASANSSGRYNNNNNNRSPRSHGRYNNDRYSSANRQSNLNSNDYQNTSNNLENRPRNLNQSSYNYDNSKDSGDVSQSDRHLKGKQTLSRDPRDERYRGFAGDSSDDRQMLKKDKRRGKNNKNFYDDPRDERYRNSSRRKGDYSDYYEEKGYRDKNHRDNKSEVRQFREESVGKEEFVQEDKLNNWRLKNSPVKKNISKKRLELDDAATQKECLTEQLNRGHLECLVCCENIRQNDAVWSCSNCYHVLHLKCLKKWAESSQSESGWRCPACQNINLVVPEDYYCFCGKTRDPEWNRQDVAHSCGEVCGRTRAKNNCVHKCTLLCHPGSCPLCLVMVNRSCGCGKTSQSCKCSTDTLLSCSATCDKLLNCGKHKCEKTCHHGNCEACDKKVEQNCHCGKKSRFVDCLKDTEPFYSCGEACNHLLDCGNHNCSDICHPGPCGSCSLNTNLVTHCCCGQTPLTIKRANCLDPIPTCDKICSKKLKCGQPSSPHSCKASCHVGDCPPCDLTTWVKCRCGNMDREIPCCDLTTKADDARCEKKCAKKRSCGKHKCNQLCCIEIEHICPLPCSKTLSCGKHKCELTCHKGRCHPCYMSSFDELYCECGAAVIFPPVPCGTRRPTCSQPCSRQHSCGHQVLHNCHSEASCPPCTVLTQKWCYGKHELRKAVPCYFNEISCGMPCNKPVRCGRHKCITLCHPGACEKPKQVCVQPCTVPREICGHNCAAPCHDGKCPDTPCKEMVKVTCTCGNRSMTRACAENSREYQRIASGILASKMVDMQLGHSVDLEEVFGQGARKQNQLRTLECNEECRTIERNRKLALGLQIVNPDLSGKLMPRYSEYMKQCAKKDPPFCKMIHDKLTELVQLAKTSKQKSRSYSFDSMNRCKRQLVHEYCEHFGCESQAYDEEPKRNVVATAIKDKCWLPSYSLLEIVQRENGQRKVPRPLLNSVKTATPGTSEVLPSTASKSQKLPTPTWSTSKSTELEIDYFDYPNPKWK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00379334; iTF_00380775; iTF_00378408; iTF_00380009;
90% Identity: iTF_00379334; iTF_00380775;
80% Identity: -