Basic Information

Insect: Cotesia rubecula
Gene Symbol: Bcl11a
Assembly: None
Location: scaffold:1926-4052[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.0029 0.3 12.0 0.1 2 23 2 24 1 24 0.95

2 6 1.3e-05 0.0013 19.4 3.7 1 21 341 361 341 363 0.95

3 6 0.00026 0.027 15.3 0.5 2 23 381 403 381 403 0.97

4 6 8.8e-08 9.2e-06 26.2 2.9 2 23 600 621 599 621 0.97

5 6 6.3e-06 0.00066 20.3 3.3 1 23 627 649 627 649 0.99

6 6 2.9e-05 0.003 18.3 0.4 1 22 657 678 657 678 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.0029	0.3	12.0	0.1	2	23	2	24	1	24	0.95
2	6	1.3e-05	0.0013	19.4	3.7	1	21	341	361	341	363	0.95
3	6	0.00026	0.027	15.3	0.5	2	23	381	403	381	403	0.97
4	6	8.8e-08	9.2e-06	26.2	2.9	2	23	600	621	599	621	0.97
5	6	6.3e-06	0.00066	20.3	3.3	1	23	627	649	627	649	0.99
6	6	2.9e-05	0.003	18.3	0.4	1	22	657	678	657	678	0.97

Sequence Information

Coding Sequence: CTGCAATGTTCGCAGTGTTCGCGTCGCCTAACATCCGCCTGGGACCTGATCCAGCACGTGCAAAGCGTCCACGGAGCAAGATTATACGGCCTGCCAAACTCCTCAGCGAACACATCATCAAACACACCGGCGCCGAGCCCACCGACGCCGAACCCTAGTCACTCTTACCACCTGAGCCCGCCGAACCACCTGAACCTCAGCGGAAAATCCACCGGAAGTTCCGCAGCGAATTCCTCCGGCGGAACAACCTCGAGTTCCAGCAGCAGCCGGCAACTTCAAAGCTCCTCCCTAGTCGCGGACCCACTACACAGTTTCCTGCGACTGCCCCAGCACTTGGAACGGAGCCTGCCCCCAATGTTCAGGCCGGAGTTCCTAGCCCTAAACCCCCTGGCGGGCTACCGAGGGCTCCAGGACCTCCAAACTGCGACGCGAAACCTCCAGAACCTCGGAGACCCGCTCCGCGCAATGGACGGGCTGAACCTCGGCGACCCTCTCGTCCGGAGTTCTTTAGACACCCTGAACAACGCCCGGAACCTGGCTAACCTAACGGAACTCTCGCACGCGCGGGGTCTCGGAACCCAGGGCCACCCACCCCAACTCGAAGCGAATCTGGATTTTTATTCGGCGCGCCTAAGGAGCCTCGCTAATCCGCCCTTAGGCGCGGCTCCAACGAATCCACCGACAAATCCCACGATCGTTTCGAATGTCGCCACCCCACAGTCCCATCAGTCCCCTTTAGCGGCCCAGCCAACTAACATCAACATCAACAACAACAGCACTAACAACAACAACAACAACAACAACAACAACAACAACCCCCAGAACTCCTCCAGCGAGTCCCACTTGTCCTCCAGCCCCACGACCCCCGCGAACTTGACAGTCCACGCACTGACCCAAAAGGATAACTCGCCCTGCTACAACCAGAGCCCTCCCGGGCACAACAACAACAATTCCACCGACAGTGATAAAACCAGCCATCCTCCCTCCACCCCGATAATAACAGACTCGGCAGAAACAGTCTACACCTGCGAGGTCTGCGATAAAAAGTTCCGGTTCCAGTCGAACCTAATTGTCCACAGACGCTGCCACCAGGAAAAAGACCGCCAGTTCCAGGAGTCCCAGGACGGAGGCGCCATAGCGCGCTGCGAAGTCTGCGAGGTCGAACTCTCGAACTTCTCGGAACTCCGCAAGCACATGCGCAAGGAACACTCCGATTCCTTAAACCCCGCGAGTCCCCAAGGCAGCGTTGAAACAGTTCCCGACGACGGTTCCAGCTGCGACGAGAACATGGACCTCGACGAGGGCGACGAGACGGATCAAAAGACCCGAACCGAGGAGGAGAACACTCCCGAAGACCTCAGTACCACTCAAGGCCAGAGTTCTGAGGAGGGCCTCCAGAGGCCCGACCAAAAGCCCAGCTTAGTCGGCGACCTTATGGAGAAGTTCGGCCTGAATAATATTGCTCAGTACTCCGAAGCCTACCGCCAGGCCCTCCAGGAGAACCACCGCGGGGGGTTCCTTAAAACCGAGAGTCCCTCGAACCTCACGAACTCCCTGAACAATAACAAAGAAAAGGACAGCGCTCTTTCTCCGAATTTCAATTCTTCCGCGACTGCGAACATTTTCTCCGGGACTTTTCCCCGCGCTGGACCCGATTTTGGGGGCTTATGGCTGCCCAGTGCGCATTATCTGGAGAACAGTGAGTTCCGGAAGGTCACCAAGGCCACCACGTCCAGTTTGGCACTCCAGGGTCTGCCCAGTCCGCTTTTAAAGAAGGAACGCCACGGCAGGAACGACACTTGCGAGTACTGCGGGAAGGTTTTTAAGAACTGTTCCAATTTGACGGTCCACAGGCGCTCTCACACGGGTGAGAAACCTTACAAATGCGAGCTCTGTTCCTACGCATGCGCTCAGAGTTCCAAGCTCACTAGGCACATGAAAACTCACGGCAGGCATGGTAAAGATACTTACAAGTGCCGGTTCTGCGAAATGCCCTTCTCGGTTCCTAGTACTCTGGAAAAACACATGAGGAAGTGCGTGGTTGTTGTTCAACAGGGACCCAAATTGGGACTGCCCTATCCCGGGAGCCAGGACGAGGACTCAAGTCTTAGCACCAAGGACACTTGA
Protein Sequence: LQCSQCSRRLTSAWDLIQHVQSVHGARLYGLPNSSANTSSNTPAPSPPTPNPSHSYHLSPPNHLNLSGKSTGSSAANSSGGTTSSSSSSRQLQSSSLVADPLHSFLRLPQHLERSLPPMFRPEFLALNPLAGYRGLQDLQTATRNLQNLGDPLRAMDGLNLGDPLVRSSLDTLNNARNLANLTELSHARGLGTQGHPPQLEANLDFYSARLRSLANPPLGAAPTNPPTNPTIVSNVATPQSHQSPLAAQPTNININNNSTNNNNNNNNNNNNPQNSSSESHLSSSPTTPANLTVHALTQKDNSPCYNQSPPGHNNNNSTDSDKTSHPPSTPIITDSAETVYTCEVCDKKFRFQSNLIVHRRCHQEKDRQFQESQDGGAIARCEVCEVELSNFSELRKHMRKEHSDSLNPASPQGSVETVPDDGSSCDENMDLDEGDETDQKTRTEEENTPEDLSTTQGQSSEEGLQRPDQKPSLVGDLMEKFGLNNIAQYSEAYRQALQENHRGGFLKTESPSNLTNSLNNNKEKDSALSPNFNSSATANIFSGTFPRAGPDFGGLWLPSAHYLENSEFRKVTKATTSSLALQGLPSPLLKKERHGRNDTCEYCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRHGKDTYKCRFCEMPFSVPSTLEKHMRKCVVVVQQGPKLGLPYPGSQDEDSSLSTKDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00380649; iTF_00379145;
90% Identity: iTF_00379145;
80% Identity: -