Basic Information

Insect: Cotesia rubecula
Gene Symbol: br
Assembly: None
Location: scaffold:6884-11673[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.021 2.2 9.2 5.9 1 23 463 485 463 485 0.98

2 8 1.8e-05 0.0019 18.9 1.7 1 23 491 513 491 513 0.98

3 8 6.8e-07 7.1e-05 23.4 0.2 2 23 522 543 522 543 0.98

4 8 1.9e-06 0.0002 22.0 0.2 1 23 549 571 549 571 0.98

5 8 2.3e-06 0.00024 21.7 5.8 1 23 577 599 577 599 0.97

6 8 3.8e-07 4e-05 24.2 2.1 1 23 605 627 605 627 0.98

7 8 9.6e-06 0.00099 19.8 6.4 1 23 633 655 633 655 0.98

8 8 3.2e-05 0.0034 18.1 1.1 1 21 661 681 661 682 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.021	2.2	9.2	5.9	1	23	463	485	463	485	0.98
2	8	1.8e-05	0.0019	18.9	1.7	1	23	491	513	491	513	0.98
3	8	6.8e-07	7.1e-05	23.4	0.2	2	23	522	543	522	543	0.98
4	8	1.9e-06	0.0002	22.0	0.2	1	23	549	571	549	571	0.98
5	8	2.3e-06	0.00024	21.7	5.8	1	23	577	599	577	599	0.97
6	8	3.8e-07	4e-05	24.2	2.1	1	23	605	627	605	627	0.98
7	8	9.6e-06	0.00099	19.8	6.4	1	23	633	655	633	655	0.98
8	8	3.2e-05	0.0034	18.1	1.1	1	21	661	681	661	682	0.94

Sequence Information

Coding Sequence: ATGACAGATTTCAACTTTAGACAATTCAAACGTTGTGATTATGCACGCAGGCATACAGATAAAGTAATTGCCACTGGTTTGTTTCTTCCTGTTAGTGTTGGTCAATCCCGTCTATTACTTATATTACTGGGCACTTTGCAAGCTTGTATGCCTTTGAAGACTATTGTATGTAGGCAAGAAGAGATAATGAAGGCGCTGAAGAATATACATAAAGATTTTGTGCGGAAGAAACTTGAGATAAAAGCCGAAACAAACTGTGGTTTGATGGAGACGGTTCATATCAATGTAGCAAGTGCTGTCAAAGATTTATTGAAGGATGCGTTGGTATCACCGACATTCGCTGATGTTTCATTGTGCTGTTCGGGAGGAAAAAAGTTTTTAGCGCATCGATTAGTGCTATCTGCTGCTAGTCCGTATCTTCGTGTCGAGGGCAATGATCTAGCTTCAATCTTAGGATTTCTCTACACTGGAAGTGTCGCGGTGCCTCAAGCGAGATTAGAAGCTTTCTCAAGTACTGCAGATGCTCTTAAAATTAGAATACCTCCGTTACCACATGCTTTGAAAGCTCAAACTTTATCTGATGCAAAAAATAATTCGAGCTATAAATCTTACGCTCACGTAGATCTACCAGAAGATTGTCAACAAGTTGGTTTGAATTTAAAAATTATAAACAAAACACATTGTTTACGACGATTACTTATGTCACCGCATCAAGAAATTTCAGATAATAATAACGTTAATTGCAATAAGGATAATAATTCATTTAATAAATTAAAATCGTATGTAGCAAATCGAGTTATTGCTTCTCCATGGTCGCAATTAGTTCAGCCAAAATTTCAACCAATCCTCAAGAATAAATCTTCGAATCTTTCTGTTTTAAGTCTTAAAACTAATGCTTGGAATAATGTTTTGATTCGAATTTATATGGATAACATTCCGGCGAGTTTTTATTCATCTGAGTCTTCTTGCATTCACCACGAGCCAACAAGTTCTTTGAACACCAGTACAACAACTGTAGGCGTTGAAAAATTATTTGTTACTCGTGTCAGTACGGAAGAAACTTATAACAATAATTTAAAAACATTAGAGACTGCTATCACAAAAGACGATGATCAATCTCGTGTCAATTGCCACGATAAAATTGCTCAAGATGAAACAATAAATTTATCTTCAAGATTGCAGCCGGTAGCAAAAAATAATAACAGTCAATTAAATTATGATGATAATAAACTTGATAAAAAACCGCTGAATTGCTTAAAGAGGCAAGTTAGTCTTGGCGAAGTAGATGAAGTTAAATTGGGTACCGTTATAAGTCATGATGATAACAATAATCGTAATGACACTTCAGATGCAGCTGAATTTATTCCGACACTTGTTTCGGAAAATTTTAAATGTAAAAACTGTGAAAAAATTTTTACATGTGAAAAAACGCTCAAGGATCACCGTAAAAGCCATTTCAAAGAAAAACCTTTTCGCTGCGTCGATTGTGGTAAAGAGTTTTCGCAACTTCGGAACTACAAGTACCACCGCAGCGTGCACGAAGGTACCGGAGAATTTGCAGCAACTTGTCCTGAATGCGGCAAATCATTCAATGATCGTGGATACTTGGGCTCACATATGAAGATCCATCGCAATAAAAAAGAGTACGCTTGCGACGATTGCGGGAAGAGCTTTAATCAACGTGTGGCGTACAATATGCACGTTCGTATTCATACAGGCGTTAAACCTCACCATTGTGAGCAATGTGGGAAGGATTTCTCACGAAAAATGCTCCTGAAGCAACACATGAGGACACATTCTGGAGAGCGTCCTTATCAGTGTCACATTTGTAATAAGGCGTTTGCTGATAAGTCCAATATGACTCTTCACACACGGCTTCACTCTGGTTTGAAGCCTTATCAATGTGACATTTGCTCCAAGGCCTTCACTAAAAAACATCATTTGAAGACACATTTGAATTATCATACTGGAATTAAGCCCTATGCTTGTCCTAATTGTAAATTAACATTTTCACAAAGCAGTAATATGAGGACTCATTATAAAAAGTGTGTAAATAATGCAAATAGTAATACTGGAGCTAAAAAAAAAAGTAATAGTTCTTCTCTCGATGAAAAGATTAAAAATTATGATGATTTTTCAAATGTTTTAACACCTCCTCACTCAGTCCGTGATATTATGTAA
Protein Sequence: MTDFNFRQFKRCDYARRHTDKVIATGLFLPVSVGQSRLLLILLGTLQACMPLKTIVCRQEEIMKALKNIHKDFVRKKLEIKAETNCGLMETVHINVASAVKDLLKDALVSPTFADVSLCCSGGKKFLAHRLVLSAASPYLRVEGNDLASILGFLYTGSVAVPQARLEAFSSTADALKIRIPPLPHALKAQTLSDAKNNSSYKSYAHVDLPEDCQQVGLNLKIINKTHCLRRLLMSPHQEISDNNNVNCNKDNNSFNKLKSYVANRVIASPWSQLVQPKFQPILKNKSSNLSVLSLKTNAWNNVLIRIYMDNIPASFYSSESSCIHHEPTSSLNTSTTTVGVEKLFVTRVSTEETYNNNLKTLETAITKDDDQSRVNCHDKIAQDETINLSSRLQPVAKNNNSQLNYDDNKLDKKPLNCLKRQVSLGEVDEVKLGTVISHDDNNNRNDTSDAAEFIPTLVSENFKCKNCEKIFTCEKTLKDHRKSHFKEKPFRCVDCGKEFSQLRNYKYHRSVHEGTGEFAATCPECGKSFNDRGYLGSHMKIHRNKKEYACDDCGKSFNQRVAYNMHVRIHTGVKPHHCEQCGKDFSRKMLLKQHMRTHSGERPYQCHICNKAFADKSNMTLHTRLHSGLKPYQCDICSKAFTKKHHLKTHLNYHTGIKPYACPNCKLTFSQSSNMRTHYKKCVNNANSNTGAKKKSNSSSLDEKIKNYDDFSNVLTPPHSVRDIM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00379098;
90% Identity: iTF_00381274;
80% Identity: iTF_00381274;