Basic Information

Insect: Cotesia rubecula
Gene Symbol: -
Assembly: None
Location: scaffold:11876-22482[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 8.5e-05 0.0088 16.8 1.4 1 23 441 463 441 463 0.96

2 18 1.7e-05 0.0018 19.0 1.9 1 20 469 488 469 491 0.94

3 18 2.8e-05 0.0029 18.3 0.7 1 23 497 519 497 519 0.98

4 18 6.9e-05 0.0072 17.1 4.4 1 21 525 545 525 547 0.95

5 18 2.1e-05 0.0022 18.7 4.6 1 23 553 575 553 575 0.99

6 18 2.1e-05 0.0022 18.7 5.3 1 23 581 603 581 603 0.97

7 18 8.1e-06 0.00084 20.0 7.1 1 23 609 631 609 631 0.97

8 18 0.21 21 6.1 0.5 1 12 637 648 637 653 0.86

9 18 5.8e-05 0.0061 17.3 6.7 1 23 664 686 664 686 0.97

10 18 1.8e-05 0.0019 18.9 5.8 1 23 692 714 692 714 0.98

11 18 4.8e-07 5e-05 23.9 2.9 1 23 720 742 720 742 0.98

12 18 7.1e-06 0.00074 20.2 7.8 1 23 748 770 748 770 0.98

13 18 2.3e-05 0.0023 18.6 9.1 1 23 776 798 776 798 0.98

14 18 2.9e-05 0.0031 18.2 7.5 1 23 804 826 804 826 0.98

15 18 0.0014 0.15 12.9 8.8 1 21 832 852 832 854 0.94

16 18 1.1e-05 0.0011 19.6 0.4 1 23 860 882 860 882 0.98

17 18 0.026 2.7 9.0 4.5 1 23 892 914 892 914 0.98

18 18 4.2e-07 4.3e-05 24.0 1.3 1 23 920 942 920 942 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	8.5e-05	0.0088	16.8	1.4	1	23	441	463	441	463	0.96
2	18	1.7e-05	0.0018	19.0	1.9	1	20	469	488	469	491	0.94
3	18	2.8e-05	0.0029	18.3	0.7	1	23	497	519	497	519	0.98
4	18	6.9e-05	0.0072	17.1	4.4	1	21	525	545	525	547	0.95
5	18	2.1e-05	0.0022	18.7	4.6	1	23	553	575	553	575	0.99
6	18	2.1e-05	0.0022	18.7	5.3	1	23	581	603	581	603	0.97
7	18	8.1e-06	0.00084	20.0	7.1	1	23	609	631	609	631	0.97
8	18	0.21	21	6.1	0.5	1	12	637	648	637	653	0.86
9	18	5.8e-05	0.0061	17.3	6.7	1	23	664	686	664	686	0.97
10	18	1.8e-05	0.0019	18.9	5.8	1	23	692	714	692	714	0.98
11	18	4.8e-07	5e-05	23.9	2.9	1	23	720	742	720	742	0.98
12	18	7.1e-06	0.00074	20.2	7.8	1	23	748	770	748	770	0.98
13	18	2.3e-05	0.0023	18.6	9.1	1	23	776	798	776	798	0.98
14	18	2.9e-05	0.0031	18.2	7.5	1	23	804	826	804	826	0.98
15	18	0.0014	0.15	12.9	8.8	1	21	832	852	832	854	0.94
16	18	1.1e-05	0.0011	19.6	0.4	1	23	860	882	860	882	0.98
17	18	0.026	2.7	9.0	4.5	1	23	892	914	892	914	0.98
18	18	4.2e-07	4.3e-05	24.0	1.3	1	23	920	942	920	942	0.97

Sequence Information

Coding Sequence: ATGAACAGCGAACAGCATGCATTGCCAGCGACCACGCAGGCACAGCAAGAGGAAGTAAACGCGGGTCAAAGCAGTCGCCCTTCTTATCCGGGTGGCTTGGCTGCCGCCACGAGTGTCGGGAATGTAGGGAGTACAGTCCCGCATTCGTCAGCGGACCTGCGTGTAGGTACAGCTGTAGCGTTAGCCGCCTCCTCGCTATCCTCTCCGGCAAAGTTCTGGCTCCTGAATCTGTTTCCTCCTGGATCGCTGCCTCAGGTCTCGGTGTACCACCACCACCACAACTCCGCTCACAGGGGAGCTAGCGGAGCCGTAGGACCTGGACCTGGTCCTGGAAACGGCTCCGGGCCAGCAGCAAAAGAAGGAACTTTGTCCCAGGAAATGGCACTGGCTACCAATGCCCACCACCAGACGTCTCATCATCATCACTCACCTGGAGTGGCTCCTGGTCACCACTCTTCCCTGCAGTCTAACGCCCAGATTCCAGTTTCTCTTCCTGGTCTCAACCTAGACGGTTCGCACATCCCGAGTCACCTCCAAGCTCACGCCCAGATGCAACAGCAAATGCAATCCCAGCAGCAGCAACAGTTGCATCAATCCCAGCAACAGCAGTCCCATCATCAAATGCAGAATCACCAAGCCAACACTGGACAGAACTCTCAGAATCAGTCGGCCCAGCGTGATGACAAAATCAAGGACGAAGGCGGCAGTTGTACCACCGAGCGTTGCAGCGATAGCCAAGTACACTGTCAGGTACAATGTGATCTTCAGCTTCAGCAACCGCAAGACTTACAACAGAGTATGATGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGATTGGAGTTAATATCAGTGGGAATCCCGGGACGGATAGCGGTAATCAAAATAATGCGGAGAAACCAGAGAAGGAAAAAGAATTGCGACAACTTAATATGACTCAGTTTCAAGTACCAGATTTAAAAGCTGGAAGCCATATGATGGATGTTAGAACGGCAGATGGATCATTAGTCAAAATAAGTGCGGGTAATGAGCAAGACCTTGCTAAAACTCTTAATGTTGAGATGGTACAAAATATGTACAAGGTTAATGTCGAAGACATTAATCAACTGCTGGCCTATCACGAAGTGTTCGGTAAGCTCCAGAGTGAAATAGCTGCCGGAACAACTCTCGTCGGTGGTACAGTGCCGACACAAACTGTTACCACTATCCAGAATGGTACACCGCTGGCACAACAAGTGCAATTGAATAAATTTGACATTACCAAGAGCGATGGGGAGGCAACACCTGGACCCAGCGCCTCCCCAGTTTCTGTGGGCAGCCACGCGTGCGAGGTCTGCGGGAAGATCTTCCAATTTCGCTATCAGCTGATAGTTCACCGTCGTTACCATACCGAAAGAAAGCCGTTCACGTGTCAAGTTTGTGGCAAAGCATTTTCAAATGCAAACGACTTGACTCGTCACGGCAAGTGCCATCTTGGAGGCTCTATGTTTACCTGTGCCGTTTGCTTCCACGTTTTTGCGAACGCGCCGTCTCTCGAACGCCATATGAAACGCCACGCTACTGACAAGCCCTACAATTGTACTGTTTGCGGAAAAAGCTTTGCTAGGAAAGAGCATCTGGATAATCACACTCGTTGTCATACTGGTGAAACACCTTACAGATGTCAATATTGCGCAAAAACTTTCACACGCAAGGAACACATGGTAAACCACGTGAGAAAACACACCGGTGAAACGCCTCATCGCTGTGACATCTGCAAGAAGAGCTTCACCCGCAAAGAACATTTTATGAACCACGTAATGTGGCATACTGGCGAGACACCTCATCATTGCCAGGTTTGCGGGAAAAAGTACACGCGCAAAGAGCACTTGGCAAATCACATGCGTTCTCACACCAATGATACGCCTTTCCGCTGCGAAATTTGCGGTGAGTCTTGCACCAAGCTACAAGTATTAACAATAATAATNTGGCACACGGGTGAGACACCCCATCGCTGTGACTTTTGTTCGAAGACATTTACCCGGAAAGAGCATCTATTGAACCATGTACGTCAACACACCGGTGAGTCTCCTCATAGATGTGGCTTCTGCTCTAAATCATTCACCAGAAAGGAACATCTTGTTAATCATATTCGTCAGCATACTGGTGAAACTCCATTCCGTTGTCAGTACTGTCCAAAAGCATTCACACGTAAAGACCACCTGGTGAATCACGTGAGACAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACGAAATCCTTCACGCGCAAGGAACATTTGACAAATCACGTACGTCAACATACAGGCGAGTCGCCCCATCGTTGTCACTTCTGCTCAAAGTCATTTACACGCAAAGAGCATTTGACGAATCACGTCAGAATCCATACCGGTGAGTCTCCCCACAGATGCGAATTTTGCCAGAGAACATTTACGAGAAAAGAACATCTCAATAATCATTTACGACAACATACTGGAGATTCGTCTCATTGCTGTAATGTCTGCTCCAAGCCATTTACCCGAAAGGAACATTTGGTAAATCACATGCGTTGTCATACCGGCGAAAGACCATTCGTCTGTACCGAATGCGGTAAAAGCTTCCCTCTAAAAGGCAACCTGCTCTTCCACATGCGTTCCCACAACAAAGGCAGCAATGCTGAGCGGCCTTTCCGCTGCGATCTCTGTCCGAAAGATTTCATGTGCAAGGGCCACTTGGTGTCTCACCGACGCTCCCACTCGGATGAGCGACCCCACAGCTGTCCCGACTGCGGGAAGACTTTCGTCGAGAAGGGCAACATGCTGAGACACTTGCGGAAGCACGCGGCTGAGGGTCCGCCGACCCAAGTCACCACGCCGTCAGCGATTCCGCAACCCGGGGTCTTACCGATTCCTACAGCCGCGGCCGTTCTCGTCGGCCATCCTCTGGCTCCACCCGCGCCTCCATGTTTGTGA
Protein Sequence: MNSEQHALPATTQAQQEEVNAGQSSRPSYPGGLAAATSVGNVGSTVPHSSADLRVGTAVALAASSLSSPAKFWLLNLFPPGSLPQVSVYHHHHNSAHRGASGAVGPGPGPGNGSGPAAKEGTLSQEMALATNAHHQTSHHHHSPGVAPGHHSSLQSNAQIPVSLPGLNLDGSHIPSHLQAHAQMQQQMQSQQQQQLHQSQQQQSHHQMQNHQANTGQNSQNQSAQRDDKIKDEGGSCTTERCSDSQVHCQVQCDLQLQQPQDLQQSMMQQQQQQQQQQQIGVNISGNPGTDSGNQNNAEKPEKEKELRQLNMTQFQVPDLKAGSHMMDVRTADGSLVKISAGNEQDLAKTLNVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGGTVPTQTVTTIQNGTPLAQQVQLNKFDITKSDGEATPGPSASPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFSNANDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGESCTKLQVLTIIXWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVTTPSAIPQPGVLPIPTAAAVLVGHPLAPPAPPCL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00899003;
90% Identity: iTF_01006477;
80% Identity: -