Basic Information

Gene Symbol
CDC5L
Assembly
None
Location
scaffold:4446-6815[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.9e-16 4.7e-13 49.4 1.6 4 46 11 54 8 54 0.95
2 2 5.1e-12 6.1e-09 36.2 0.1 1 45 60 103 60 104 0.94

Sequence Information

Coding Sequence
ATGCCGAGAATAATGATCAAAGGGGGGATATGGCGCAACACAGAGGATGAAATCCTCAAAGCCGCTGTGATGAAGTACGGAAAAAATCAATGGAGCCGTATAGCATCATTACTGCACAGAAAATCAGCGAAGCAGTGTAAAGCCCGTTGGTTCGAGTGGTTGGACCCCAGCATCAAGAAGACCGAATGGAGCCGAGAAGAAGACGAAAAATTATTGCACCTAGCCAAGCTGATGCCAACTCAATGGCGAACGATTGCTCCAATAATCGGCCGCACTGCTGCCCAGTGTTTGGAGCGCTTCGAATCTCTCCTGGACCAAGCCCAGAAAAAAGAGGACAACGAGGACATTGATGATCTCAGGAAATTGAAGCCCGGAGAGATAGATCCCAATCCAGAGACAAAACCAGCGCGTCCCGACCCCAAGGATATGGATGAAGACGAGCTGGAGATGCTTTCAGAAGCTCGTGCTAGGTTGGCGAACACACAAGGAAAGAAAGCTAAGCGTAAAGCCCGAGAAAAACAATTGGAAGAAGCTAGACGACTTGCTGCGCTTCAGAAAAGGCGAGAATTAAGAGCTGCTGGTATTACCGTGTCGCAAAAAAACAAACGTAAGCGCGGAATTAATTACAATTCAGAAATTCCCTTCGAAAAGCGACCTGCGTTGGGATTTTACGACACAGCCAATGAACACGTGGATCCTCTTGCTGCTGATTTCAGTCGCATGCGTCAACAACACTTGGACGGAGATTTGCGGTCTGAAAAAGAAGAATTGGAACGCCGGAAAGACAAACAGAAGCTTAAACAGCGTAAAGAAAATGATATTCCAATGGGAATTCTCAATAACGAAGAACCACCTCGTAAAAGAAGTAAATTAGTTCTACCAGAGCCTCAAATTTCTGACCAGGAGCTCCAACAAGTAGTAAAACTAGGACGAGCTTCTGAAATCGGCCGTGAAATAGCTAGCGAGAGTGGAATTGAAGCCTCTGAGAGTTTGTTAGCTGACTATTCTTTGACTCCTAATGTACCAGTGACTCCAAGGACTCCTGCAGTGACGGACAGAGTTCTCCAAGAGACTCAAAATGTGATGGCTCTTACACACGTGGACACGCCTTTAAAAGGCGGATTGAACACTCCGCTTCACAATGTTGATTTTAATAGTATTGTTCCTTCCTCTTCGGCTGTTGCTACTCCAAACACTATTTTGGCGACGCCTTTCAGGTCACAGCATGGAGATGGAACACCACTGAGCAATACGTTTAGTACTCCGGGATCTACCAGGACACTAAGTGGGAAAAATATCTCAGCTACGCCGATTCGTGATAAATTGAACATCATTACCAATGAAGATTTGGAAGCTTCTGAATCATCAGGTCTTAGGAAAAAAATTAAGCAGCAAATGCAAGCTGATTTTAGCACTTTGCCGAGTGCTAAAAATGATTATCAGATAGTCGTGTCTGATAATGAAGCTATGGAGGAAGAAGCGGATAAATCTGAGAGGAATATTGTTGAAGATCAGGCGGATATTGATGCTAGAAAGCAGCAAAATTTGATAGAGCAGCAAAAGAGGGAGCTGGAAAAACGGTCTCAGGTTATTCAGAGAGGATTACCTCGGCCGGTTGAAGTTAATTTGAATATACTGAGGTCTTCTACGGAGGGCTCGTTGACTGACTTTCAGCGAGCTGAGGAATTGATCAAGAAAGAGATGGTCACTATGATGATGTTTGATGCGGTCCAGAATCCTGTCCAGCAGAGTAATAAAAGGAATACTGCTTTGTCGCAAATTCAGTCTTACTTGGACCAGAATCCTTATGAAGAATTTGAGAAGACTGAATTGGACAATGCGAAGAAGCTGTTGGATGATGAAATGGCTGTCGTGAAAGAAGGTATGGCCCATGGAGATCTCAGCTTGGATGCTTACACTACCGTCTGGGAGGAGTGCTCGTCCCAGATCTTGTATTTAGAGACCCAGAAAAGATACACCAGGGCTAATTTAGCTTCAAAGAAAGACAGAATTGAGTCTCTTGAGAAGAAACTTGAGGATAATAGGACTCTCATGACTGGAGAAGCAAAGAAAGCAGCCAAGCTGGAAAAGAAATTGAAGATCTTGACGGGAGGATATCAAACCAGAGCGCAAGTGCTGTCAAAGCAGCTTAATGATCTGCAGGATCAGATCCAGCAGGCGCAGCTTGAACTTTCGACTTTCCAGTTCTTGAAGACTCAAGAGGAAGCTGCCATTCCACGAAGAGTTGATTCTCTTATGAGTGACGTTAATAAGCAGATAGCAAGGGAGAAAAATCTCCAAGTTCATTTTGCTAATCTGCAGGACGAACTTCAAAAATTAGTGCCGGATAGTAGTGAAAAAACTAATTAA
Protein Sequence
MPRIMIKGGIWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERFESLLDQAQKKEDNEDIDDLRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGITVSQKNKRKRGINYNSEIPFEKRPALGFYDTANEHVDPLAADFSRMRQQHLDGDLRSEKEELERRKDKQKLKQRKENDIPMGILNNEEPPRKRSKLVLPEPQISDQELQQVVKLGRASEIGREIASESGIEASESLLADYSLTPNVPVTPRTPAVTDRVLQETQNVMALTHVDTPLKGGLNTPLHNVDFNSIVPSSSAVATPNTILATPFRSQHGDGTPLSNTFSTPGSTRTLSGKNISATPIRDKLNIITNEDLEASESSGLRKKIKQQMQADFSTLPSAKNDYQIVVSDNEAMEEEADKSERNIVEDQADIDARKQQNLIEQQKRELEKRSQVIQRGLPRPVEVNLNILRSSTEGSLTDFQRAEELIKKEMVTMMMFDAVQNPVQQSNKRNTALSQIQSYLDQNPYEEFEKTELDNAKKLLDDEMAVVKEGMAHGDLSLDAYTTVWEECSSQILYLETQKRYTRANLASKKDRIESLEKKLEDNRTLMTGEAKKAAKLEKKLKILTGGYQTRAQVLSKQLNDLQDQIQQAQLELSTFQFLKTQEEAAIPRRVDSLMSDVNKQIAREKNLQVHFANLQDELQKLVPDSSEKTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00381769;
90% Identity
iTF_00381769;
80% Identity
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