Basic Information

Gene Symbol
grh
Assembly
None
Location
scaffold:12188-19834[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.8e-30 5.5e-26 91.6 0.0 25 148 264 384 250 387 0.91
2 2 0.0021 24 4.4 2.7 203 221 387 405 385 407 0.90

Sequence Information

Coding Sequence
ATGGGCCAGAAACTTCTTGTCGAGAGCGCCGGCTCTCGACTAGAGAATTCGGAGAACGGAAGCGGTGAACTCCATCATTTTCTGCACCAATATAATCAGCAATCGCCGAGTCCAAATCAAAATCTCCAGGGAAACATCCCTTTGCCCCTCAGCCCGCAATCTTTGAGACACGACGGTTCTTCGGGAATCGCGTGCAGTCCGCGGCTATCAACCTACAACTCCGGTTCAAATGCCAGTGGAAGTGCGACGCCAGGTCTTCACCAAGGGGAAGGGAACACTGTCTACGTAACCAGCGAAGCTCTTCCACCTCTAGCGTCCTCAAGTTCAGCCGCACTTTCCACGACAACGACGTCCTATACCAGGTACGAGGTGGTGCCCAGTTCTTACACCACCCACGCAATAAGGTCCTCGTCCAGCAGCAGCAAGGTCCTCACCGTAGACCTTCCAAGTCCCGATTCTGGGATTGGAGCTGACGCAGTAACTCCAAGACAGGACCACCATCCTCCGACAGCTTTGCACCAGTCCTCGTTCGACTACACTGAGCTGTGTCCCAGCAATAACAATAATGCAACGACAGTGGTCCTTGAAAGTGGAGCTGTTGTTCATCATCAACCTCTCCAGCTTCAATTACAACAGTCTCACAATCAGAGCCAGGTCCAGAGCCAGCGGGGACTGGTGAATCCTTCAGCTTCAGCTTCACCATCCACTACTCCAAATCCTCCTAGATCCAGACCTTGGCACGACTTTGGGCGCCAGAATGACGCAGATAAAATTCAGATACCAAAAATTTATTCAGCGTATGGGTTCAAGTATCATCTGGAATCACCGATAAGCACGTCACAGCGACGGGAAGATGACAGAATAACGTATATTAATAAGGGTCAATTTTACGGAATCACTTTAGATTATGTTCCCGATCCAGACAAACCACTTTTGAAAACCGGACAAACTGTTAAGAGTGTTGTAATGTTAATGTTCCGTGAAGAAAAAAGCCCAGAAGACGAAATAAAAGCTTGGCAATTTTGGCACGGTCGGCAGCATTCAGTGAAGCAACGGATTCTTGATGCGGACACAAAAAATAGCGTTGGATTGGTTGGCTGTATCGAAGAAGTTGCTCATAATGCCATTGCTGTTTATTGGAATCCATTAGAATCTTCAGCAAAGGGTGCCGAAAGAAAGACACGCGACGAAGAGAGAAGAGCAGCCAAGCGTAAAATGACTGCTACAGGCAGGAAAAAGCTTGATGAATTGTATCACTCTGTTACTGAACGCAGTGAATTTTATTCAATGGCTGATCTTCATAAACCACCGGTATTATTTTCACCACCCGCTGAGCACGCACTTGACAAGCAGTTTTCAACAATGGAATTATCCGGGTTCTACGGGGCGGGAAATGGCGGTGGTGACACAGACACCTCATCGCTGAGCAACGGTGAGGGCGGAATGAAAACAGGAACCAGTAGTCCGTACCCAGGATGCGGAAGACCCAGTCTTCCAGCTTTGAAATTTCACAATCACTTTCCTCCAGACAATCTCGCCGGAATCCACGACAAAAAAGACTCACTGCTGATGCAAGTTCAGGAATTGCAAGGCACCGTTCTTCAAGGAGTTCCTCCAGGTGCTTTGACCTCCACTGCAGGAACTCTCGTCTCCAGTGTCAGTAATCGTCTGCATCTTCAGCACCAGACTCAGCAATCTCACCTCCGTGGAAACGATTCTGAAGAACGGGTCATGCTTTATGTCAGACAGGAATCTGAAGATGTTTACACGCCGCTACATGTCACGCCTCCTACCGTCCAAGGACTCCTCAATGCTATTGAATCAAAGTACAAAATTGCATCCTCGAGTATTAATAATCTGTATCGAAAAAACGCAAAAGGAATCACGGCGAAAATTGACGATGACATGATCCGCCATTACGTTGACGAAGATTTATTCCTATTGGAAGTGAGTCACTCAACGACACCGGCAAACCCGGAATGTAATCAAAGCAATCCAGGGTCACCTGGGGATCCAGATGACCCCAACGATTCGTCATCAATAGGTTACGATGTTACACTAATTAAATTGCAAACACAATTAACGCCCCCGCCTCCGTCATTATCATCATCAACTTCACCCGCGACTGTAAATTCTCATATTCACGGCCACGTTCACGAGGTCACGAATTCGTGA
Protein Sequence
MGQKLLVESAGSRLENSENGSGELHHFLHQYNQQSPSPNQNLQGNIPLPLSPQSLRHDGSSGIACSPRLSTYNSGSNASGSATPGLHQGEGNTVYVTSEALPPLASSSSAALSTTTTSYTRYEVVPSSYTTHAIRSSSSSSKVLTVDLPSPDSGIGADAVTPRQDHHPPTALHQSSFDYTELCPSNNNNATTVVLESGAVVHHQPLQLQLQQSHNQSQVQSQRGLVNPSASASPSTTPNPPRSRPWHDFGRQNDADKIQIPKIYSAYGFKYHLESPISTSQRREDDRITYINKGQFYGITLDYVPDPDKPLLKTGQTVKSVVMLMFREEKSPEDEIKAWQFWHGRQHSVKQRILDADTKNSVGLVGCIEEVAHNAIAVYWNPLESSAKGAERKTRDEERRAAKRKMTATGRKKLDELYHSVTERSEFYSMADLHKPPVLFSPPAEHALDKQFSTMELSGFYGAGNGGGDTDTSSLSNGEGGMKTGTSSPYPGCGRPSLPALKFHNHFPPDNLAGIHDKKDSLLMQVQELQGTVLQGVPPGALTSTAGTLVSSVSNRLHLQHQTQQSHLRGNDSEERVMLYVRQESEDVYTPLHVTPPTVQGLLNAIESKYKIASSSINNLYRKNAKGITAKIDDDMIRHYVDEDLFLLEVSHSTTPANPECNQSNPGSPGDPDDPNDSSSIGYDVTLIKLQTQLTPPPPSLSSSTSPATVNSHIHGHVHEVTNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
iTF_00378491;
80% Identity
-