Cglo019019.1
Basic Information
- Insect
- Cotesia glomerata
- Gene Symbol
- nfxl1
- Assembly
- None
- Location
- Contig22112:1285-6531[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.011 1.3e+02 3.1 0.8 4 10 48 54 47 55 0.97 2 19 5.4e-07 0.0062 16.9 16.2 1 19 62 79 62 79 0.99 3 19 7.1e-08 0.00082 19.7 14.6 3 18 116 131 105 132 0.90 4 19 0.22 2.5e+03 -1.0 0.6 5 10 156 161 156 163 0.88 5 19 0.073 8.5e+02 0.5 10.4 1 19 167 186 161 186 0.84 6 19 1.1 1.3e+04 -3.3 0.3 6 10 212 216 211 219 0.61 7 19 0.014 1.6e+02 2.8 8.6 3 18 224 239 222 240 0.90 8 19 0.0029 33 5.0 8.0 1 12 274 285 274 285 0.94 9 19 1.6 1.9e+04 -3.8 1.6 6 10 295 299 295 299 0.95 10 19 4.8e-07 0.0055 17.1 14.6 1 19 305 323 305 323 0.93 11 19 0.92 1.1e+04 -3.0 1.5 5 10 351 356 351 356 0.94 12 19 7.7e-05 0.89 10.0 9.7 9 19 371 381 369 381 0.90 13 19 0.0023 26 5.3 6.7 1 11 391 400 391 401 0.96 14 19 0.72 8.4e+03 -2.7 5.8 14 18 432 436 432 437 0.89 15 19 1.4e-05 0.16 12.4 5.3 1 12 473 484 473 484 0.97 16 19 2 2.3e+04 -4.3 1.4 6 10 498 502 497 502 0.74 17 19 0.00044 5.1 7.6 15.8 1 19 510 527 510 527 0.93 18 19 2 2.3e+04 -6.3 3.4 9 13 533 537 533 537 0.71 19 19 6.1e-06 0.071 13.5 9.9 1 16 572 586 572 592 0.90
Sequence Information
- Coding Sequence
- atgaaagttataataaatgataattttatgatcgcaagTCCAAAATGTCGTCAAGAGTATCCCGAATCCGAGGCGCCAACAAACTACTTCTGCTTTTGCGGTAAAACGATGAACCCGCCTTACCAACCCTGGATGATTCCCCACTCTTGTGAAGAAACTTGCGGTAAATTATTACAGCCTGAATGCGGACACGTATGCGTTCTGCTCTGTCACCCAGGACCATGTCCACCATGTCCAAAAATGGTTTCAACCAGCTGTTACTGCGGAAAAAAAGGTGCGCAACCTCGACGGTGCAACGCCAAATTCTGGAGCTGCGGAAGCCCGTGTGCCAAAAATCTTCCTTGCAATCATAAGTGTCCCGAAATTTGTCATTCCGGAGCATGTCCACCTTGTATCAGCTCGGTGACAGTTCCCTGTCACTGCGCGGACCAAATCGCCACGCGAATGTGTCGAGAATCTATATGGAACTGCGAAAAACCATGCGGTAGATTACTACCATGCCGAATTCACAAGTGTTCTGGATTTTGCCATCTTCTCACAGACTGTGGTGAGTGTCCATTAGCTAAAAACCGCACTTGTCCATGTGGAAAGAAGCGATACCAAGTTTCGTGTACGCAACCTACTGTACCGACCTGTGGCGACACTTGTAACAAACTACTAGACTGCAAATCCCACTTCTGCAACATGCGCTGCCATCCGGATGCCTGTGGTCAGTGTCTAGAAGTAGTAACCAAACAATGTCGCTGCGGTAGCTTCACCAAAGAGATAGCATGTACGAAAGACTTTCATTGCAACAAAAAATGCACCCAAATTCGACAATGTGGCCGACATCCGTGCAACAAAAAATGTTGCGACTGCATTGCGACCAACAATTACAACGTTTGTGAAAAAACATGCGACAATCTGTTGAACTGCAGAAAGCATAAATGTCCGGCTCGGTGTCACAGTGGACCTTGTTATCCTTGTCCAAGAACAGTAGTCATTCAATGTCGCTGCGGTGGATCTAAAATTACCGTTCCTTGCGGAACAACAAAGCGAATCAAACCGCCAAAATGTACAAAGTTATGCAAAATTCCACCTGACTGCCATCACACTAAACGCGAATCCCACAAGTGTCACCAAGGCCCCTGCCCACCTTGTCGGAAAATATGCGGCTTGGTGTACAAACAATGCGGACATGATTGTAAAGTAGTTTGCCACCAAAATGTCTGGGTCAAAGTCCTTGTAAATGGGTCCCATCAACCAGCTGGTCCTTGGGAGACTCCTCAAGAAGCTATGCAGCTCAAAACTTTTCCCTGTCCACCTTGTGAAGTTTCTGTGATGGTGACTTGTCTTGGCGGCCATGAAACAAAGCCCTGGCCGTGCTACAAAGCAGTACCGACATCTTGCTTACGCGAGTGCGGACAATTGCTGAAATGCAGCAACCATACATGTGAATTGCTTTGCCATAAATTGAATGATAGTCCTGGAAGCAATGAACTTTGCAAACAATGTGAACTTCCTTGTTTGTTACCCAGACCACAAGGTTGCTCACACGCATGTCCGAAACCTTGCCATCCAGCGCCTTGTCCAGCTTGTAAACAGATTGTCAAAATTCCGTGTCATTGTGGAATCAATAGTCTCTACAAACGCTGCTCGGAGCTGACTAGCGCCACCCTTGATCAGAAAAATGAACTACTGAAGTGCGGGAATCAGTGCCCGAAAAATTATGCTTGTGGGCATCGATGTATTGACAATTGTCATCCTGGAGCGTGTCGCAGTAAAGAAAATTGCAACAAACGCGTTAAGGTTACGTGTTCTTGCGCGAGAATCAAGAAGAACTTTATGTGCGTTGATGTTCAGAGAGGCAATGCCGTTGTTGCGTGTGACGACCGCTGCGAGGCGCTGAAGATTGAGAAGGAGAGACTTAGGGAGGCTGAATTGGAAAAGAAGAAACGGGAAGAAGAAATTAAAAATAGAAAAGAAATTGAAAAGTTTGAACGCAAGTTCAAGCCCAGGCATAAAAGTGTTAAAACGGACGAAAATTTGGACCAAGGTCAGAAGAATGATTACATTTTTTTACAGTTTATGGTACTGGGAGTTTGTTTGACTCTTTTGGCGTGGATTACTACCGTATATTTCGATCAATAA
- Protein Sequence
- MKVIINDNFMIASPKCRQEYPESEAPTNYFCFCGKTMNPPYQPWMIPHSCEETCGKLLQPECGHVCVLLCHPGPCPPCPKMVSTSCYCGKKGAQPRRCNAKFWSCGSPCAKNLPCNHKCPEICHSGACPPCISSVTVPCHCADQIATRMCRESIWNCEKPCGRLLPCRIHKCSGFCHLLTDCGECPLAKNRTCPCGKKRYQVSCTQPTVPTCGDTCNKLLDCKSHFCNMRCHPDACGQCLEVVTKQCRCGSFTKEIACTKDFHCNKKCTQIRQCGRHPCNKKCCDCIATNNYNVCEKTCDNLLNCRKHKCPARCHSGPCYPCPRTVVIQCRCGGSKITVPCGTTKRIKPPKCTKLCKIPPDCHHTKRESHKCHQGPCPPCRKICGLVYKQCGHDCKVVCHQNVWVKVLVNGSHQPAGPWETPQEAMQLKTFPCPPCEVSVMVTCLGGHETKPWPCYKAVPTSCLRECGQLLKCSNHTCELLCHKLNDSPGSNELCKQCELPCLLPRPQGCSHACPKPCHPAPCPACKQIVKIPCHCGINSLYKRCSELTSATLDQKNELLKCGNQCPKNYACGHRCIDNCHPGACRSKENCNKRVKVTCSCARIKKNFMCVDVQRGNAVVACDDRCEALKIEKERLREAELEKKKREEEIKNRKEIEKFERKFKPRHKSVKTDENLDQGQKNDYIFLQFMVLGVCLTLLAWITTVYFDQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01005700;
- 90% Identity
- -
- 80% Identity
- -