Basic Information

Insect: Cotesia glomerata
Gene Symbol: ECU06_1150
Assembly: None
Location: Contig1823:7066-10598[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0057 0.61 11.0 0.1 1 23 312 335 312 335 0.95

2 8 0.00065 0.07 14.0 2.5 1 23 368 390 368 390 0.98

3 8 0.0015 0.17 12.8 5.3 1 23 396 419 396 419 0.93

4 8 1.4e-05 0.0015 19.2 1.0 1 23 425 447 425 447 0.98

5 8 3.2e-07 3.5e-05 24.4 1.8 1 23 453 475 453 475 0.99

6 8 4.5e-05 0.0048 17.6 2.4 1 23 481 503 481 503 0.98

7 8 1.9e-05 0.0021 18.8 0.6 1 23 509 531 509 531 0.97

8 8 2.3e-06 0.00024 21.7 0.8 2 23 538 560 537 560 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0057	0.61	11.0	0.1	1	23	312	335	312	335	0.95
2	8	0.00065	0.07	14.0	2.5	1	23	368	390	368	390	0.98
3	8	0.0015	0.17	12.8	5.3	1	23	396	419	396	419	0.93
4	8	1.4e-05	0.0015	19.2	1.0	1	23	425	447	425	447	0.98
5	8	3.2e-07	3.5e-05	24.4	1.8	1	23	453	475	453	475	0.99
6	8	4.5e-05	0.0048	17.6	2.4	1	23	481	503	481	503	0.98
7	8	1.9e-05	0.0021	18.8	0.6	1	23	509	531	509	531	0.97
8	8	2.3e-06	0.00024	21.7	0.8	2	23	538	560	537	560	0.96

Sequence Information

Coding Sequence: ATGGAACCGAAGAGTTCAATACCGTATCAACAGTGTGATGAGACAGAGTTATTTGCGTCTGTCAAAAAAATTGTTTATACCAATGTCATTGAGACAAATAACATAAATAACAAATATTTAATATTTAATAATGAATTAAATCAACAAAATATCCCTGATTCTATTTCAACAACAATGCTGGATGACACGAATATTTATTGTGGTGAGCAAGAAAACTCCGAAATTAATCTACAAGACTTGTGTCGAGTATGTGCTAACACAAATAATCATATGGTTCCAATATTTGGAGATGAAAGCCTACAACATGATTTAATTAATAAAATATCAAGGTACTTGCCAATAAATATCACAAAAAATGACACATTGCCCTTGCAATTGTGTTACAACTGCGCCTCGACTTTAATAGCTTGGCATGATTTATTGGAAGGATGTTTGGATGCTGAGCAAAAGCTGTTAGGGATTGAAGAACGATTATTTACAAAGAAACAGGTTGACAAATCTGATGATTTAGAAACTGTCCAACAATCTGTATCCCATGTAGAGAGTAATCCAGTACCTCAAAGTTTAGAACATGAAAAAGAACCTATCCCCGAAAATTCAAAGACACCTAGTGAAGAAAGGTCTTCATTTATACAAACAAGAAGTATAACTTCAAGATGTATGAAAAAAAATTCAATAACGAGTCATGACAAGTTGGAAGAACTACCGAGACCCATGGTTGAACAAATCAATCAAGAACCTGAAGATTATTCTGAAGATAATGATGATTCATGTGCTAGCGTAGATGAAGCTCGGGTTAATAATAGAGATAAAGATAAATATAAAGATTTAAATGACTTTTCAGATAAAACGGAGCGAAAATTGAAAAAAAAAGATAATAAAAATTCAAAAACTCAACAAGAACCTCAAGTAAAACACTCACGACCTCGCTTATATCCTTGTATGTACTGTGATTTTATAGGTAATAAAAAAAAGTTATTGCAAGCACACATGATTGAGATTCACCCGGACGTACCGATGGATGATTTAATAAAAAAGCCATCTTGCGTTGATAAAGAAATGATCGAAAACGCTCGAATGGAAGCTGATGGTCGCGTTTATTATCACTGTGAAGACTGTGGCAAAAACCTTTTCTCACCATACACATTTTTTTGGCACAAGCGTATCCATACAGGTGAACGTCCATTCTGTTGTCATCTCTGCGGCAAACAATTTCGAGTCAACCAAGGTCTTGCCCGACATTTACACGAGACACACGAGGGAATTAAAAATTTTTCGTGTGACATTTGTAGTAGAACATTTGCTACCAAGCGCACACTTGATGATCATCGACGTATTCATACAAATGAACGGCCTTATGTTTGTAACAGATGTGGAAAAACTTTCAAGCAAAAAGCGTCGCTTTTTGTTCACAATCGCACACACAGTGATGTATTCCCATTCAAGTGCGTACACTGTGAGCAATCCTTTCGCACACGTCCGACGCTTATGGTTCATATTACCAAACATACTGGTGAAAAACCATTTGTTTGTGATATTTGTAGTCGACCTTTTAGAATAAAGTATGAATTAAAAAGACATAAACTTGTACATTCAGATGAAAAACCGTGGCAGTGTTCTGAATGTGGATTATCATTCCGTCAAAAACGTTATTTAGTTAACCATAGACGTATAAACCATGGAAGTGAATCATCTGTAATGGAAAAGTAA
Protein Sequence: MEPKSSIPYQQCDETELFASVKKIVYTNVIETNNINNKYLIFNNELNQQNIPDSISTTMLDDTNIYCGEQENSEINLQDLCRVCANTNNHMVPIFGDESLQHDLINKISRYLPINITKNDTLPLQLCYNCASTLIAWHDLLEGCLDAEQKLLGIEERLFTKKQVDKSDDLETVQQSVSHVESNPVPQSLEHEKEPIPENSKTPSEERSSFIQTRSITSRCMKKNSITSHDKLEELPRPMVEQINQEPEDYSEDNDDSCASVDEARVNNRDKDKYKDLNDFSDKTERKLKKKDNKNSKTQQEPQVKHSRPRLYPCMYCDFIGNKKKLLQAHMIEIHPDVPMDDLIKKPSCVDKEMIENARMEADGRVYYHCEDCGKNLFSPYTFFWHKRIHTGERPFCCHLCGKQFRVNQGLARHLHETHEGIKNFSCDICSRTFATKRTLDDHRRIHTNERPYVCNRCGKTFKQKASLFVHNRTHSDVFPFKCVHCEQSFRTRPTLMVHITKHTGEKPFVCDICSRPFRIKYELKRHKLVHSDEKPWQCSECGLSFRQKRYLVNHRRINHGSESSVMEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00379835;
90% Identity: iTF_00379835;
80% Identity: -