Cglo002605.1
Basic Information
- Insect
- Cotesia glomerata
- Gene Symbol
- ZFHX3
- Assembly
- None
- Location
- Contig16165:2527-8821[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.14 15 6.7 0.1 2 23 34 56 33 56 0.95 2 13 0.019 2 9.4 0.0 1 23 74 97 74 97 0.95 3 13 0.01 1.1 10.2 3.6 2 23 159 181 158 181 0.95 4 13 0.00083 0.089 13.6 0.8 1 23 198 220 198 220 0.97 5 13 0.00026 0.028 15.2 0.1 2 23 227 249 226 249 0.93 6 13 0.0017 0.18 12.7 3.3 1 23 353 377 353 377 0.91 7 13 0.0047 0.51 11.3 0.6 1 22 397 418 397 421 0.89 8 13 1.8e-05 0.002 18.8 0.5 1 23 460 484 460 484 0.93 9 13 0.0075 0.81 10.6 0.1 2 21 534 553 533 554 0.93 10 13 0.14 15 6.6 2.0 2 19 695 712 694 717 0.91 11 13 0.0001 0.011 16.5 2.5 1 23 1346 1368 1346 1368 0.99 12 13 0.00044 0.048 14.5 0.8 1 23 1470 1492 1470 1492 0.98 13 13 0.0091 0.98 10.4 0.3 2 23 1635 1657 1634 1657 0.95
Sequence Information
- Coding Sequence
- GAACGCCAAGAAGGCAGTGAGTGCGACAGCGAAGTAAAGCAAGAGCCAGACAACGACCATGACCCGGACCAAGATCCTGAGAACGAACCGGAGGAGGTGGTGTGTCCTCTGTGCACCTACCAACCGACCTCGAAAGAAGAGTTGAAGCAGCACTTGCAAATAGCGCATACGCAAGACCCGGACGAAAAAATGGAAGTGAAAGAGGAACCCAGCCAAGACTTTATCTGTCCTCTGTGCCAGGACGGCTTCAAAGACCGGCCAGCTTTGGAGAAGCACGTGATGCAAATCCATTCGGTAAACACCGACGGACTTGCACGACTGCTCCTGCTAGTAGACCAGAGCCACTGGCTGAACAACAACCCAAGAAACACATCAACCCCCGCAATACCTCCCACATCTCCATCAACCACCAAGCAGAACGTTCCATCCGAGGAAGAGAACGACCGAGCTCCAGAAGAAGTCGACGAGCTGACCCGCTGCAGCATTTGCGGACGCTTGTGTCGTTCCTTGGAAGAACTGCAGCAGCACCACCGAGAATCTCACCCGGCTGCCACACCAGCTTTGGCAGTCAGCGAGAAACACGTCTACAAATACCGCTGCGGACAATGCAGCCTGGCGTTCAAAACCCTGGACAAGTTGCAGCAGCACGCTCAGTACCACGCGATCAGAGACTCGACCAAGTGCGCCCTCTGCGGCCGTTCCTTTCGTTCCATTCAAGCTCTGCAGAAGCACATTGAAGCAGCTCACGGGGATTTGCAAGAAGACGCGATCAACCAGTACAAACAAAGTCTTCTGCAAGCTCACCCTCTTCTTCAAGCCATCACCGAGGAAGCCCTCAGACGTCAGGTCAGTCTAGCAGAAGAGCAAAACGCTGAAGAAGAAACTCGCGGTAGTGTCAGCGGAGTCGGAAATGCCAGCGCTACCGGCGGAGATGAAGACGAGAGCGACGCCAGCGACTCGTCCTCCATGCACAAAGACCAGAGACTCATGGAGGACTACTTGAACAGCCAAGCGATGGCTGAAGATTCCTACCAATCGAACGACGCTGGTCGCAAATTCAAGTGCCATCGTTGCAAAGTAGCCTTTACTAGACAAAGCTACCTCACTGGACACAACAAGACTCTTCTTCATCGCAAAGGCGAGAAGATGACCTACCCAATGGAGAAGTACCTCGACCCCAACAGACCCTACAAGTGTGACGTCTGCAAGGAAAGCTTCACGCAGAAGAATATCTTGCTGGTTCACTACAACAGTGTCAGCCACTTGCATAAATTGAAGCGCGCTGTTCAAGAACAGGGTAATAATAACACGATATCAGTTCCTCCATCGAGTCCCACTGATACGCCAGATTCTCAGGTTGATCAGGATAAAAAACCCTATAAGTGTAATATTTGCAAGGTTTCGTATACCCAAAGCAGTACTTTGGACATTCACATGCGAAGTGTGCTGCATCAAACCCGAACCAGCAAGATTCCTGATCTTGCTGCTAGTGGGCAGCTAGATTTAGCGAGGCCTTTGATTGAACAGCCGACTTTGAGTCCCGAAAGTCCGCCTTATAGTGCGAATAACAATTCTGGGAGTAATAATAGTAATGTTATTTCTTGTGGAAGGTGTAATGCTTCGTTTGTGAATCAGGAACAATTGGTGACACATCAGCAGCTTTATTGTATGTTCAGTAGTCCTTTAGCGTTGTTCCAACAATTGGCGGCGACTCAGCAATTGGCTGAGAATGCGCAAAATACCGCGGGGCAGCAAATTGCGCAGCAGGTCACTCAGCAGCAGCATCAGAATCAGGCTCAGGATATTCTTTCGCAGCCTAGGCACAAGACTTCGCAGATGTACAAGCATTTGTTGGAGAGTTTTGGGTTTGATTTGGTGATGCAGTTCAATGAGAATCATCAGAGAAGGCAGAGGAAAGAGGAGGAGGCTGCTGCTGCGCTTCAGGCTCAGCAGGAGCAGCAGAAACAGGAGCAGCAGAAGCAGGCACTTGCTGCCCAGCAACAGATGCAGCAAGCTAGTGCTCAGGAAAGGGATGAAGATGAAGATGGTGAAGAAGAAGCGATTCCTGAACTGACTCGCAGCACTTGTCAGCATTGCAATAAAGAGTTTAGTAGTGTTTGGGTGCTGAAGGCACATTGTGAAGAAGTTCATAGAGATCTGGTGCCTAGAGAGTTTCTGGAGAAGTACGCGCAGCAGTTCAAGTGTGAATATGAGAAAAAGAGCGTTGTTGTGACTGCTGCGACGTCCTCGTCGACGAACACCGCGCCTAGAAGTTCAACACCTGCCAATGCGAACAATCAGGGCCAGCAATTGCCCCAGGATTTGAGTTCTGATAGAGAAAAGGACAAGAAGGACAAAGAGAGGGAGAAAGATAAGGATAAGGAGGATAGGGAGAAGGACAAGGAGGAGAAAGAAAGAGGTAGAGGAACTCCTGAAGCTTCGTCTACGACTCCAGCGACTACACCTGCGCTGTCTAACACTCCGGTTTCTAGTACTGATTCAACGGGACAGGCCAATGCGCACCATGGAGTTCAGCAGCATCCTCAGTTACAATTGTCTCAGCAACAGCTCAATGATATGCAAGCTGCAGCGTTTATGGCTGCTTCTCAACTTCAACATTTACAACAGTATCCACAATTGATGATGGGCATGATGGGATTGCCGTTTAATTTGGCAGCGATGAATTTACAACCACCGTTAGTACCCATGATGCTTCCTCCACCGCCGTATGATGGCGCTGCANNNNNNNNNNCACAATTGATGATGGGCATGATGGGATTGCCGTTTAATTTGGCAGCGATGAATTTACAGCCACCGTTAGTACCCATGATGCTTCCTCCACCGCCGTATGATGGCGCTGCGCCGCCATATCCCGCGATTAATCCACAAGCTGATATTCTTGCCAAGCAACATTTACTTCAGCAGCAGCAACAACAAGCTGCGGCAAACGCAGCATCTCAAAAGCGCGCCCGAACCCGGATAACCGACGACCAACTGAAGATCCTCCGAGCTCACTTCGACATAAACAACTCCCCCGGTGAAGAGCAAATAATGGAGATGGCTGCTCAGAGTGGGCTTTTACCAAAAGTAATCAAGCACTGGTTCCGTAACACGCTCTTCAAAGAGCGCCAGCGTAACAAAGACAGCCCCTACAACTTCAACAACCCGCCATGTACAACCTTAAACCTAGAAGAGTACGAAAAAACCGGCGAAGCCAAAGTAACACCCTTGAACTCAAGCGGAAACTCCGGAGCGAGTTCCTCTGACGACAAAAGCCCGAACAAGCAATCAGCATCACCACCAGCGATCTCTATTCCGTCTACCGCAACGTCAACTGCAATCTCAACAGCGCCTATCACCGAGATAAAGCAGGAGCCGATCAGCGAGCCGATGCTCAGCCACCAACTGCACCAACAATTGCAGGCTCAACAGTTAGACGAATCCCATCATTCTCCAGGGAGTTCCGGAGACCAGCAGTCAAGGCCTCACTCTCCAGCGCTTAGCATGAGCTCAGTGTTCTCTGGTCTCCACCACGACCTGTCCTCGCACATGCCTTCGACAACCAGCGCCCCAATGCTCCCGCCAAAGTTAACGCCGCAGAATTTCGCAAGCCCAAACTCCGGGCTCGCCGGAACGATTCCGACCTCGATGTCCGGCGCCCTTTCTCTGACACCTCAGCGATCGATCAGTCCCGGGCGTAATCCCACGGATTTTTCCTTCAGCGGCAACAGCAACGGCAGCAACTCCTCAAGCAGTTCTGGAAAAAGAGCAAACCGAACTAGGTTCACAGATTACCAGATAAAAGTCCTCCAGGAGTTCTTTGAGAACAACGCCTACCCAAAGGACGACGACCTGGAGTACCTAAGCAAGCTCCTGGGTCTTAGTCCCCGAGTGATCGTCGTTTGGTTCCAAAACGCCCGACAGAAGGCCCGCAAGGTCTACGAAAATCAACCAGCGGCCGAACCAGTCACTCCAGGAGGAAACCGCGAGGTCGATGACGGTTCCGGGAGGTTCCAACGCACTCCCGGACTCAATTATCAGTGCAAAAAGTGTCTGCTAGTGTTCCAACGATACTACGAACTGATCCGTCATCAAAAGACCCACTGCTTCAAAGAGGAGGATGCTAAAAGAAGTGCCCAGGCTCAAGCAGCCGCTGCTCAAGTTGCCGCTGTTCTAAGTTCCGAAGACAGTAATAGCAGTTCGACCACGACGACAAACGCCGTGCCAAACAACCCATCTAACGTTCCAATTCTCACCGACCAGCTTCAACAGCCTCTGAACACTCCCACCCCGCCGCATCTGCAGCCGACTCCCTCAGTTCAAAGTCCGCAGAGTCAGCAACAGCAGAATCAAAACCAAAACCAAAACCAGCAGCCAAACCCCCAAGTAGAAGTTAAAGAGGAAAATTTTCAGTGCGACAAGTGTAATTTGATGTTCAGTCGGTTTGAACTTTGGCGCGAGCACCAGTTGGTACATATCATGAACCCATCGCTTTTTCCGGCCTCTTACGCGCCTGACTCAGCTTTTGGGATTCTTCAACAGCAAGCTCTGAACGCCACCTCTGGCTCTGATCTACAGCAGCATCCTCTGTTGGCGATGATGCAAGACCGGAAGAGGAAGTTTGACGACTATGATGACAGTATTGTTGGAAATGAGAGTCGTAGTAATTCTGAGCACAGTGAGCAGCCTAAAGACAAGCGGCTGAGAACGACCATCTTGCCGGAGCAGCTGGACTACCTTTACCAGAAGTACCAGATCGAGTCGAATCCCTCGAGGAAGATGCTAGAGACGATAGCTCGTGAGGTGAATCTTAAGAAACGCGTTGTTCAAGTGTGGTTTCAAAATACTCGAGCTAGAGAACGCAAGGGACAGTTTCGCGCTCATAGCCAGGTCATCAACAAAAGGTGTCCCTTTTGTCCCGCACTTTTCAAAGTAAAGTCCGCACTTGAGTCCCATCTTAGCAGTAAACACGCTGATCAAGTCGCGAGGGGTGAAGTTAATATTGACAACATTCCCGATGAAGAACTGTCGATGGACTCGGCTCCTTCGAATCCGAGCACGCCCAGCTTGATGCCGCCGCTGTTCTCGGCGTTCAACAACGAGCTGGACACCTCAATTATCAAGAGGCTCTATGAGGAGTCCATGAAGAGCTACATGAGCGAGCTCACCGCTCACACCTCCAACGGCCGCCCTGAAACTGCAGTTACTCAGGGAATGAGCAACAGCAATGCCAATACTGCCACCGGGGAGTCTCCTTTGGACTTGAGCAAGCCCGTAGACCTCAGCCGGTCCATGAAATTCAGTCTCACCGGGCTGAGTAGTCTTCTGGAAGAGCAGCAGAGTGGTGTTCCGTCGCACTTTCGCGGTGGGAGCGACTGCGGGCCGCTTACGGACTTGTCCGAGCGCAGCATTTGTGACGACGACAGCATGAGCGAAACTACCGAGTTCCTGGATGACGAAAGCGGGCCTCCCAGCCCGGCGTCCAGCACTCAAAGCTCGAGACACGGCAACGCTACGACACCTAGCGGAATTACCACTCCCACTGGTTTACCCGGGAGTGGGGGCAATGCCAGCGGAGGAAACGGAACCGGAAGCAACTCTAACGCCGGCGGGCAATCTGGGGGAAAGCGGTACCGGACTCAAATGTCCGCGACTCAAGTTAAAGTTATGAAGTCTCTGTTTTCGGACTACAAAACTCCGACGATGGCCGAGTGCGAGATGCTGGGACGCGAGATCGGGCTTCCAAAGCGTGTGGTCCAGGTGAGCTTCATTGGCGCTGCTACTGGTCAACAACGCATTTAA
- Protein Sequence
- ERQEGSECDSEVKQEPDNDHDPDQDPENEPEEVVCPLCTYQPTSKEELKQHLQIAHTQDPDEKMEVKEEPSQDFICPLCQDGFKDRPALEKHVMQIHSVNTDGLARLLLLVDQSHWLNNNPRNTSTPAIPPTSPSTTKQNVPSEEENDRAPEEVDELTRCSICGRLCRSLEELQQHHRESHPAATPALAVSEKHVYKYRCGQCSLAFKTLDKLQQHAQYHAIRDSTKCALCGRSFRSIQALQKHIEAAHGDLQEDAINQYKQSLLQAHPLLQAITEEALRRQVSLAEEQNAEEETRGSVSGVGNASATGGDEDESDASDSSSMHKDQRLMEDYLNSQAMAEDSYQSNDAGRKFKCHRCKVAFTRQSYLTGHNKTLLHRKGEKMTYPMEKYLDPNRPYKCDVCKESFTQKNILLVHYNSVSHLHKLKRAVQEQGNNNTISVPPSSPTDTPDSQVDQDKKPYKCNICKVSYTQSSTLDIHMRSVLHQTRTSKIPDLAASGQLDLARPLIEQPTLSPESPPYSANNNSGSNNSNVISCGRCNASFVNQEQLVTHQQLYCMFSSPLALFQQLAATQQLAENAQNTAGQQIAQQVTQQQHQNQAQDILSQPRHKTSQMYKHLLESFGFDLVMQFNENHQRRQRKEEEAAAALQAQQEQQKQEQQKQALAAQQQMQQASAQERDEDEDGEEEAIPELTRSTCQHCNKEFSSVWVLKAHCEEVHRDLVPREFLEKYAQQFKCEYEKKSVVVTAATSSSTNTAPRSSTPANANNQGQQLPQDLSSDREKDKKDKEREKDKDKEDREKDKEEKERGRGTPEASSTTPATTPALSNTPVSSTDSTGQANAHHGVQQHPQLQLSQQQLNDMQAAAFMAASQLQHLQQYPQLMMGMMGLPFNLAAMNLQPPLVPMMLPPPPYDGAAXXXXQLMMGMMGLPFNLAAMNLQPPLVPMMLPPPPYDGAAPPYPAINPQADILAKQHLLQQQQQQAAANAASQKRARTRITDDQLKILRAHFDINNSPGEEQIMEMAAQSGLLPKVIKHWFRNTLFKERQRNKDSPYNFNNPPCTTLNLEEYEKTGEAKVTPLNSSGNSGASSSDDKSPNKQSASPPAISIPSTATSTAISTAPITEIKQEPISEPMLSHQLHQQLQAQQLDESHHSPGSSGDQQSRPHSPALSMSSVFSGLHHDLSSHMPSTTSAPMLPPKLTPQNFASPNSGLAGTIPTSMSGALSLTPQRSISPGRNPTDFSFSGNSNGSNSSSSSGKRANRTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLGLSPRVIVVWFQNARQKARKVYENQPAAEPVTPGGNREVDDGSGRFQRTPGLNYQCKKCLLVFQRYYELIRHQKTHCFKEEDAKRSAQAQAAAAQVAAVLSSEDSNSSSTTTTNAVPNNPSNVPILTDQLQQPLNTPTPPHLQPTPSVQSPQSQQQQNQNQNQNQQPNPQVEVKEENFQCDKCNLMFSRFELWREHQLVHIMNPSLFPASYAPDSAFGILQQQALNATSGSDLQQHPLLAMMQDRKRKFDDYDDSIVGNESRSNSEHSEQPKDKRLRTTILPEQLDYLYQKYQIESNPSRKMLETIAREVNLKKRVVQVWFQNTRARERKGQFRAHSQVINKRCPFCPALFKVKSALESHLSSKHADQVARGEVNIDNIPDEELSMDSAPSNPSTPSLMPPLFSAFNNELDTSIIKRLYEESMKSYMSELTAHTSNGRPETAVTQGMSNSNANTATGESPLDLSKPVDLSRSMKFSLTGLSSLLEEQQSGVPSHFRGGSDCGPLTDLSERSICDDDSMSETTEFLDDESGPPSPASSTQSSRHGNATTPSGITTPTGLPGSGGNASGGNGTGSNSNAGGQSGGKRYRTQMSATQVKVMKSLFSDYKTPTMAECEMLGREIGLPKRVVQVSFIGAATGQQRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00378286;
- 90% Identity
- iTF_00380122;
- 80% Identity
- iTF_00380122;