Basic Information

Insect: Cotesia glomerata
Gene Symbol: -
Assembly: None
Location: Contig42619:112-15878[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 5.6e-05 0.0061 17.3 2.3 3 23 405 426 403 426 0.95

2 23 3.5e-05 0.0038 18.0 2.1 1 23 431 453 431 453 0.99

3 23 0.0038 0.41 11.6 1.9 1 23 491 513 491 513 0.98

4 23 1.3e-05 0.0014 19.3 1.4 1 23 519 542 519 542 0.96

5 23 0.00046 0.049 14.5 2.0 1 23 549 572 549 572 0.98

6 23 0.002 0.22 12.4 0.6 1 23 637 660 637 660 0.91

7 23 0.33 35 5.5 6.0 1 23 725 747 725 747 0.98

8 23 6.2 6.7e+02 1.5 1.6 1 23 780 802 780 802 0.95

9 23 7.5e-05 0.0081 16.9 0.9 1 23 820 843 820 843 0.96

10 23 0.0093 1 10.3 1.1 1 19 849 867 849 869 0.97

11 23 0.049 5.3 8.1 3.3 1 23 952 975 952 975 0.86

12 23 5.1 5.5e+02 1.7 0.6 1 20 1056 1075 1056 1077 0.77

13 23 1.5 1.7e+02 3.4 10.0 1 21 1119 1139 1119 1142 0.90

14 23 7e-05 0.0076 17.0 1.6 1 23 1155 1178 1155 1178 0.97

15 23 0.0032 0.35 11.8 0.5 1 23 1187 1210 1187 1210 0.96

16 23 0.18 19 6.3 0.5 2 23 1219 1238 1218 1238 0.83

17 23 0.0001 0.011 16.5 4.9 1 23 1244 1266 1244 1266 0.99

18 23 0.00049 0.053 14.4 0.6 1 23 1272 1294 1272 1294 0.99

19 23 0.048 5.2 8.1 2.1 1 23 1300 1322 1300 1322 0.97

20 23 0.11 12 7.0 2.2 1 23 1328 1350 1328 1350 0.98

21 23 0.00028 0.03 15.1 2.6 1 23 1356 1378 1356 1378 0.98

22 23 1 1.1e+02 3.9 4.9 1 23 1384 1406 1384 1406 0.99

23 23 7.3e-05 0.0079 17.0 4.7 1 23 1434 1456 1434 1457 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	5.6e-05	0.0061	17.3	2.3	3	23	405	426	403	426	0.95
2	23	3.5e-05	0.0038	18.0	2.1	1	23	431	453	431	453	0.99
3	23	0.0038	0.41	11.6	1.9	1	23	491	513	491	513	0.98
4	23	1.3e-05	0.0014	19.3	1.4	1	23	519	542	519	542	0.96
5	23	0.00046	0.049	14.5	2.0	1	23	549	572	549	572	0.98
6	23	0.002	0.22	12.4	0.6	1	23	637	660	637	660	0.91
7	23	0.33	35	5.5	6.0	1	23	725	747	725	747	0.98
8	23	6.2	6.7e+02	1.5	1.6	1	23	780	802	780	802	0.95
9	23	7.5e-05	0.0081	16.9	0.9	1	23	820	843	820	843	0.96
10	23	0.0093	1	10.3	1.1	1	19	849	867	849	869	0.97
11	23	0.049	5.3	8.1	3.3	1	23	952	975	952	975	0.86
12	23	5.1	5.5e+02	1.7	0.6	1	20	1056	1075	1056	1077	0.77
13	23	1.5	1.7e+02	3.4	10.0	1	21	1119	1139	1119	1142	0.90
14	23	7e-05	0.0076	17.0	1.6	1	23	1155	1178	1155	1178	0.97
15	23	0.0032	0.35	11.8	0.5	1	23	1187	1210	1187	1210	0.96
16	23	0.18	19	6.3	0.5	2	23	1219	1238	1218	1238	0.83
17	23	0.0001	0.011	16.5	4.9	1	23	1244	1266	1244	1266	0.99
18	23	0.00049	0.053	14.4	0.6	1	23	1272	1294	1272	1294	0.99
19	23	0.048	5.2	8.1	2.1	1	23	1300	1322	1300	1322	0.97
20	23	0.11	12	7.0	2.2	1	23	1328	1350	1328	1350	0.98
21	23	0.00028	0.03	15.1	2.6	1	23	1356	1378	1356	1378	0.98
22	23	1	1.1e+02	3.9	4.9	1	23	1384	1406	1384	1406	0.99
23	23	7.3e-05	0.0079	17.0	4.7	1	23	1434	1456	1434	1457	0.95

Sequence Information

Coding Sequence: ATGATAACGACGTTTGAATTAAATACTGTGGAGCAAAACAACAATAACATAGAAGTTTATTCTAACGGAACTACAGAATCTACTCCTGATAAAAAAATTAAAGAAGAAGTCACAAAAAATTTGATTGATGAAAAGAATGTTGTTTTGAACGATAATTATAACTCCATTATACAAGAAGGAATTTATTTGATAAAAGAACAAGTAAAATTATATAATGCAACAATGCAGTACTTACTAAAAACAATTAATTTAATTGCTGATAAGAAAATTCCGCAAAAAATCATCTCTGATTATTCTTCGATTGTTACTGGTCATAATTTACTTTTAGATAAAGATAAAATAAATAGCGAAATAACTTTGAAAATATGGAATGGTTCATTTGTTAAAAATGAAGAAAGTTGTAATGCAACAATCGTTGAAAATAAAAAAGTTGAAGATTTAACTAAAGATCAATCTGATAAATCGACTAAAATAGATAAAAATTCTGCACAACTGGATGATATTGAAATACTGAATAAATCTATTTCTTCAATGGATTTGAATTCATCCGATGAATTTATGAATGCGATGGATGTTGATCTAGATCCGAAGCAAGCAGATTCAACTTTATATTCTTCTCTGACCTCTTCATCCTCACCATCTACTGTTATTCTTGAGAAGAATACCTATCCTGTAAATAGTGGTAATTTATCCAATCCAGCTGTATCAGACAACAAAACATCAAAGGAAATTCCACTTGAAGTGAGCAATAATTCAGAAGAGCCGAATAAAAAGCTGAGTTTAATCGAAGTACTAAAAAACGCAAATAAGTCTTATTCAAATATGAATCGAGCATCTAAAAGATTGAAACGTAAAGCTGTAGATGAAGAAATTAATTTGGAAAATAATAAAAAGCGCTTTACAGCTAACGCAAATAATTATGATCAAGATAATTCATCATCACAACGACGTATAACTCGCTCTACAAAACGTAAAGTCTTGAACGCGAAAATTTGTTCGAAGAAACAAGAATTCAACGTTCCAGAGAGTTTTTTGCCGGTCGTTCGACTTCAGAGAATTAAGTTACCTATTAATGAAAAAAAATTGTCAGCTTTGAAGACAAAAGTTAGGAAATTAGAGACTAAAAAGACGGATAATGTTTATAATTTACGACCATCAAGTAGAAAAAATAATTGTACTGAAATTAAAAAAATAAATAACATTAAAGTAAACTGCGAGCTGTGTGACAAGACATTTAAAACAAAAGAATGTCTTAAAGTACATGTTCAATCTCAACACGTTAAAAAAAACTTTAAATGTAAGAAATGTAACTATGCGTCTAATTTTCAAGGAAATTTACGGCGACACATCAAGATTCATCAGGATACAGCGGTAGTTTCGCAATCTAATTTGAAAACTTGCTTGCGTTCCTATGCAGCCAAACTTCATCAGCGCGATAGCTGCTCTAAGGTCAACAGATCTCAAAGCAGTTTTAAGTGTAGTATCTGTTTCTATACTACGAAATCTCTAGAATTATTGAATGAACACACAAAAAATCATAAAAATAACAAATTGTTTAATTGCAATGACTGCGACAAGACTTTTGGAAGAAAAAAATTATTACAAGAACACCGTGTCACTAGTCATGATTCACAGAGTAGCAGATACTCGTGTAATGAGTGTCAACTGACATTTTCCTACTACGGTCGTCTGTCTCGTCATTTTAGAACTGTTCATGGAGTTGTAGCTGGAGCTTGTTTAGGAATTCACTTAGAAGAATTAAAAAAAATTGATGTTCCTCAAAAAAGTATTATTATTACTTCATTTATTGATTATTGTTCATCGAAGACAGACACCCCGGAAAACACCGAACTCTTTGTTAGAAATGATACAGTGGATCAATATCATTATGAAATCCACAGCGTTGAATATATTTGTCAAGATTGTGGTGAATCCTTTAGCTCTCCAGATCTACATAGACAGCACGAATTGTCTACTCACTTAAACATTGAAGTCAAGACTGAATTCGACGTTACATATGACGACCGCAATCTAGAAATCAAAGAGAAACTTGATTGTACATATTTACTTCCCAAGGAAAGTCGTATGGAGAAAAATACAGCCAAGTGTTTACTTGGCAGCTACAAATTTTCAGAAGAAAATACTGTTGGATCTTACAAAGAAGGTGATCAATATCAATGTGATATGTGTCATTACACCTCCAGCATTCTCGAGAAATTTAACAAACACCTCCACAAGCACAAGAACAAATTAACTCTTAGTAATAAATTGGACCAGAAAATTAATAAAGCTACCAAGTTAAAAGTTAAAGTAAATAGTTTCAATAAAAATGAATTTTTTTATTGTTACTTCTGCCAATATAAGACGCCGGTGCCAATTCGACTTAGAAATCACGAAAAATTTCATTTAAAACCTAAAGTTAAAGATCATAAAATCCAGCACATGAGACCTGAATGTTATGTTTGTGATCATTGTGGTCGACCATTAAAGTCCAAAATTTCTCTTGAAAAACACTTGAATCTTTACCACATGAAACCTCATCTCTTTACTTGTCGTCAATGCGGTCAACGTTATCAATCGAAAACATGGTTAAAAAAACACTCAGACTTGTGTGGAAAAAAAAAATCCGAAAAAAGAAGCTTTGCTGCAATGTCAAACAATAATGAACTGTCGAGCCTTTTTACATTTTTATCAAACGCAGTGAAAACTCTTGAAATTCCTAAAGAAAGTCCTGTCACATGCTCCGTCGAAGATGCTCCTTTGGAGAAACTAGTGATAACAAATCCAGAGATTATTGGTAACATTAAAATGGATTCGGAAGAAGAATTTTTATATACACTCAAAAGTGTTGAATATATTTGCCAAGATTGCAACAAATCATTTTGCTCGGCCAAACTACATGCGGCCCATACTCAGGAGTTTCATGTTCACGTAGGTCCTCATAAGTCTATTGGAGCAAAAAATCTCGAAGAATTTTTTAAAAATATGAATCGTGTGAGTGCTCGAATTCCTACTGAGGTCCATAGCTCAAAAGTTACACCTGCGCGTGAAGATGATAAAAGTTTGTTGCGTCTTTCTGGAAATAGATCAAGAGTTACTAGAAGTACAAAACATGGAAATTCACCCAAATCTAACAACCTGATGTATACTAAAGAAGAAGGTTATTACGCTTGTCGAATTTGTGATGCGAAATCTTTTGATCGTGAGTATATTGTCAAACATGTTTGTAGAAAGTATTCACGAATGTCATTGGAGAACCACCAATTGAACCTACCCAGTTCGACGGAGCAAAAGCAAACAATGAATCAAATTTTGAAGACAAAAACAGATTGTAACACTCAGAAAAAAAATAAATTTAAATGTGACCTTTGTTCATGTCAGTATAAGCATAAACGTCATTTGACACAGCATAAGTATGACAAACATGGTAAAGAGTCAATTAAAGCTGAAAATACAGAAGAGTTTACCTGTGAGCTTTGTTCAAAAAATTATATACGCAAGGGTGATTTAACGAGGCATAAAAACATGTACCATTCAGATTATTTAACTAATGAAAAATTTAAGTGCAACATTTGTCAAGCTGAATTTGATTCTAGTCGTAATGTGTTGATACACAAGCGTGAACAGCATTCAATAGAAAAGAAACAGCTCAAGAAATGCCCCGAGTGCGATTTTGTGACTATGTGGAATTTACGCCGTCATATGGTCCGACATAGCTCTGATCGACCTTATAAATGTTCTGATTGCAACTATTCTAGTAAAACTAAATGTACATTGAAAATTCACATTCGCTCCCATTCAGATGAGAAAAATTTTAAATGCTCAGTATGTCCATATCGCAGCCAATTCCTACCTAATTTGCAGCGGCACATTCGTATTCACACTGGATTTCGTCCCTATAAATGCAGTCAATGTTTCTTCGCAAGTGCCTATTTAGAGAATTTAAAGCGTCATAGCTTTACTCATACTGGTATTCGCCCCTTTAAATGTTCAGTATGTTCCTTCGGCAGTATAACTTATCACGGTCTTCGGGTTCATTCAAAAACTCATAATACTGTAAAATCATTCAAATGTACTCAATGCTTGTATGCCACTACAACGAAAGACAATTTGATGCGGCATTCTCGTAGGCATTTAAGAACAAAATCTTACAAATGTTCACATTGCTTATTTGCAACCAAAACTTTGAGAATTTTCAAGCAACATTTGCGTACACATGAAGAAAAAGATTCAACTGATACGAATACAAACAAATCAGAAATACAATTAAAGAGTTTAAATAATACAACAAAACAATGTTATTCTTGTTACGATTGTAAAATGTCATTTAAAAGAAAAACATCATTGGAAAAACACTGGAAGTTGCATCATTACTCCCAAATTCAAAAAGATAATAATTATCATTGCTCACTATATTAA
Protein Sequence: MITTFELNTVEQNNNNIEVYSNGTTESTPDKKIKEEVTKNLIDEKNVVLNDNYNSIIQEGIYLIKEQVKLYNATMQYLLKTINLIADKKIPQKIISDYSSIVTGHNLLLDKDKINSEITLKIWNGSFVKNEESCNATIVENKKVEDLTKDQSDKSTKIDKNSAQLDDIEILNKSISSMDLNSSDEFMNAMDVDLDPKQADSTLYSSLTSSSSPSTVILEKNTYPVNSGNLSNPAVSDNKTSKEIPLEVSNNSEEPNKKLSLIEVLKNANKSYSNMNRASKRLKRKAVDEEINLENNKKRFTANANNYDQDNSSSQRRITRSTKRKVLNAKICSKKQEFNVPESFLPVVRLQRIKLPINEKKLSALKTKVRKLETKKTDNVYNLRPSSRKNNCTEIKKINNIKVNCELCDKTFKTKECLKVHVQSQHVKKNFKCKKCNYASNFQGNLRRHIKIHQDTAVVSQSNLKTCLRSYAAKLHQRDSCSKVNRSQSSFKCSICFYTTKSLELLNEHTKNHKNNKLFNCNDCDKTFGRKKLLQEHRVTSHDSQSSRYSCNECQLTFSYYGRLSRHFRTVHGVVAGACLGIHLEELKKIDVPQKSIIITSFIDYCSSKTDTPENTELFVRNDTVDQYHYEIHSVEYICQDCGESFSSPDLHRQHELSTHLNIEVKTEFDVTYDDRNLEIKEKLDCTYLLPKESRMEKNTAKCLLGSYKFSEENTVGSYKEGDQYQCDMCHYTSSILEKFNKHLHKHKNKLTLSNKLDQKINKATKLKVKVNSFNKNEFFYCYFCQYKTPVPIRLRNHEKFHLKPKVKDHKIQHMRPECYVCDHCGRPLKSKISLEKHLNLYHMKPHLFTCRQCGQRYQSKTWLKKHSDLCGKKKSEKRSFAAMSNNNELSSLFTFLSNAVKTLEIPKESPVTCSVEDAPLEKLVITNPEIIGNIKMDSEEEFLYTLKSVEYICQDCNKSFCSAKLHAAHTQEFHVHVGPHKSIGAKNLEEFFKNMNRVSARIPTEVHSSKVTPAREDDKSLLRLSGNRSRVTRSTKHGNSPKSNNLMYTKEEGYYACRICDAKSFDREYIVKHVCRKYSRMSLENHQLNLPSSTEQKQTMNQILKTKTDCNTQKKNKFKCDLCSCQYKHKRHLTQHKYDKHGKESIKAENTEEFTCELCSKNYIRKGDLTRHKNMYHSDYLTNEKFKCNICQAEFDSSRNVLIHKREQHSIEKKQLKKCPECDFVTMWNLRRHMVRHSSDRPYKCSDCNYSSKTKCTLKIHIRSHSDEKNFKCSVCPYRSQFLPNLQRHIRIHTGFRPYKCSQCFFASAYLENLKRHSFTHTGIRPFKCSVCSFGSITYHGLRVHSKTHNTVKSFKCTQCLYATTTKDNLMRHSRRHLRTKSYKCSHCLFATKTLRIFKQHLRTHEEKDSTDTNTNKSEIQLKSLNNTTKQCYSCYDCKMSFKRKTSLEKHWKLHHYSQIQKDNNYHCSLY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -