Cglo006594.1
Basic Information
- Insect
- Cotesia glomerata
- Gene Symbol
- -
- Assembly
- None
- Location
- Contig66258:632-1294[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-09 2.2e-06 27.7 0.0 4 34 7 37 4 42 0.90 2 2 5.8 6.4e+03 -2.7 0.0 16 22 128 134 122 134 0.74
Sequence Information
- Coding Sequence
- ATGAATTATGATAAAAGTAATATTGAGAGAGCTTTAAAAGCCATCAAGGACACAGGACTCTCTATAAGAAAAGCTGCTGCTGCATATGGAATTCCAGTAGCTACATTAGGAAGAAAAAAATTTTGCGACCCTGAGAAAATGAAAAGAAGAACAGGCCCTGAAACAATTTTATCAAGTAAAGAAGAAGATGAGATTGTTAAGTGGGTGCTACATCGAGCAGAAATCGGAGCACCAATTACAAAGACTGATTTATTAGATTGCATTCAACAGTACGTCCAAGCTAATTCCAAAAAGACGCCCTTCACTGATGATCGACCTGGCCGCCACTGGTACGAAGCATTCAGAAAGCGACATCCTGAACTTTCAATTAGGAAACCTCAACAATTAAGCACTAGTAGAGCGGAAGTTAGTAAAGAAGAGTTGGAGGATTGGTTTGAAAACACCGAAAGATATTTAAAAAAAAAGAATTTGTTGAATATTTCTCCCAATAGACTCTATAATTGTGATGAAAGTAGTATACTTTTATGTCCCGATGCTGAAAGTGTGCTAGCTGGAAAAGGAACTCGAGCTGTATACACGATTGTAGATGGAGGTAAAGAGGCTTTAACAGTACTGTTCATGTATAGTGCTGAAGGTGTTCGTGCTCCTCCTATGATTATGTAT
- Protein Sequence
- MNYDKSNIERALKAIKDTGLSIRKAAAAYGIPVATLGRKKFCDPEKMKRRTGPETILSSKEEDEIVKWVLHRAEIGAPITKTDLLDCIQQYVQANSKKTPFTDDRPGRHWYEAFRKRHPELSIRKPQQLSTSRAEVSKEELEDWFENTERYLKKKNLLNISPNRLYNCDESSILLCPDAESVLAGKGTRAVYTIVDGGKEALTVLFMYSAEGVRAPPMIMY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -