Basic Information

Gene Symbol
grh
Assembly
None
Location
Contig6915:8850-22265[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.4e-63 1.3e-58 198.3 0.0 25 221 468 666 454 668 0.92

Sequence Information

Coding Sequence
ATGTGTTACAGTAGACGTAGTCGTTCTTCATCAGACTGCGAATCAAGCGTGGTTGGCGTATCAGAGCAGTACGGGACGGCAGTAGGCCGTGAGTCAACAGAGGAAGAGGGTAATCATCATCACCAACAGCATCACGAAAACCAGGTTGACCCTGAGGACCCAGAAGAAGCTTCAAAACGTGTCGCTGCCGTTCAGGTTCAAGTCCAGGGCATGGAGGGCGACTGGAGGGCGTACTGCGAGCATCCGCTTTCAGTAGCTACCGCGGCCATGCTCAACCTCCAGCAGCAGCACCAGGTCTCAGCGGTTTCTGGACACCCTGACGAGCAAAACGTTCCCTACGTCTACGAATACTACAAGTTGCCCGAGAAGTCTTCTGAGGTTAAATTACCGCCAACTCACGAGTTATGGTCAACCGGAGTTATGGGCCAGAAACTCCTTGTCGAGAGCGCCGGCTCTCGACTAGAGAATTCGGAGAACGGAAGCGGTGAACTCCACCATTTTCTGCACCAATATAATCAGCAGTCGCCGAGTCCAAATCAAAATCTTCAAGGAAACATCCCTTTGCCCCTCAGCCCTCAATCTTTGAGACACGACGGTTCTTCGGGAATCGGTATCAAAAGGGAACCTGAGGACCTTAGTTCTTCACGTGGTGCTCAGCAGTCTAAACGGCACAAACAGGCTCAGCCGGATAGTCCGACGCCCCCGGGAATGTATCATCATCATCAGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAGCATCAATTACAGGTCCAACAGTACGGAAGCCCCTACGATCCATATTCAGCGTGCAGTCCGCGGCTATCAACCTACAACTCCGGTTCAAATGCCAGCGGAAGTGCGACGCCAGGTCTTCATCAAGGGGAAGGAAACACCGTCTACGTAACCAGCGAAGCTCTTCCACCTCTAGCGTCCTCAAGTTCAGCTGCACTTTCCACGACAACGACGTCCTACACCAGGTACGAGGTGGTGCCCAGTTCGTACACCACCCACGCAATAAGGTCCTCATCCAGCAGCAGCAAGGTCCTCACCGTAGACCTTCCAAGTCCCGATTCTGGGATTGGGGCTGACGCAGTAACTCCAAGACAGGACCACCATCCTCCGACAGCTTTGCACCAGTCCTCATTCGACTACACTGAGCTGTGTCCCAGCAATAACAATAATGCAACGACAGTGGTCCTTGAAAGTGGAGCTGTTGTTCATCATCAACCTCTCCAGCTCCAATTACAACAGTCTCACAATCAGAGCCAGGTCCAGCGGGGACTGGTAAATCCTTCAGCTTCAGCTTCACCATCTACTACTCCAAATCCTCCTAGATCCAGACCTTGGCACGACTTTGGGCGCCAGAATGACGCAGATAAAATTCAGATACCAAAAATTTATTCAGCGTATGGGTTCAAGTATCATCTGGAGTCACCGATAAGCACGTCACAGCGACGGGAGGATGACAGAATAACGTATATTAATAAGGGTCAATTTTACGGAATCACTTTAGATTATGTTCCCGATCCAGACAAACCGCTTTTGAAAACCGGACAAACTGTTAAGAGTGTTGTAATGTTAATGTTCCGTGAAGAAAAAAGCCCAGAAGACGAAATAAAAGCTTGGCAATTTTGGCACGGTCGGCAGCATTCAGTGAAGCAACGGATTCTTGATGCGGACACGAAAAATAGCGTTGGATTAGTTGGCTGTATCGAAGAAGTCGCTCATAATGCCATTGCTGTTTATTGGAATCCATTAGAATCTTCAGCAAAGATAAACGTCGCTGTACAGTGTTTAAGCACGGATTTTTCAAGTCAAAAAGGTGTAAAAGGATTGCCGTTACATGTCCAAGTGGACACATATGAAGAACCACCTTCACATTCTCATTCATACACGCCACCTTCTCATCGTGGTTACTGTCAAATAAAAGTTTTTTGTGATAAGGGTGCCGAAAGAAAGACACGCGACGAAGAGAGAAGAGCAGCCAAGCGTAAAATGACTGCTACAGGCAGGAAAAAGCTTGATGAATTGTATCACTCTGTTACTGAACGCAGTGAATTTTATTCAATGGCTGATCTTCATAAACCACCGGTATTATTTTCACCACCCGCTGAGCACGCACTTGACAAGCAGTTTTCAACAATGGAATTATCAGGGTTCTACGGCGCAGGAAATGGCGGTGGTGACACAGACACCTCATCGCTCAGCAACGGTGAGGGCGGAATGAAAACAGGAACCAGTAGTCCGTACCCAGGATGCGGAAGACCAAGTCTTCCAGCTTTGAAATTTCACAACCACTTTCCTCCAGACAATCTCACTGGAATCCACGATAAAAAAGACTCGCTGCTGATGCAAGTACAGGAATTGCAGGGCACCGTTCTTCAAGGAGTTCCTCCAGGTGCTTTGACCTCCACTGCAGGAACTCTCGTCTCCAGTGTCAGTAATCGTCTGCATCTTCAGCACCAGACTCAGCAATCTCACCTCCGTGGAAACGATTCTGAAGAACGGGTTATGCTTTATGTTAGACAAGAATCTGAAGATGTCTACACGCCGCTACATGTCACGCCTCCAACCGTCCAAGGACTCCTCAATGCTATTGAATCAAAGTACAAAATTGCATCCTCGAGTATTAATAATCTGTATCGAAAAAACGCAAAGGGAATCACGGCGAAAATTGACGATGACATGATCCGCCATTACGTCGACGAAGACTTATTCCTATTGGAAGTGAGTCACTCAACGACACCGGCTAATCCGGAATGTAATCAAAGCAATCCAGGGTCACCTGGGGACCCAGATGACCCCAACGATTCGTCGTCAATAGGTTACGATGTTACACTAATTAAATTGCAAACACAATTAACGCCCCCGCCTCCGTCATTATCATCATCAACTTCACCCGCGACTGTAAATTCTCATATTCACGGCCACGTTCACGAGGTCACGAATTCGTGA
Protein Sequence
MCYSRRSRSSSDCESSVVGVSEQYGTAVGRESTEEEGNHHHQQHHENQVDPEDPEEASKRVAAVQVQVQGMEGDWRAYCEHPLSVATAAMLNLQQQHQVSAVSGHPDEQNVPYVYEYYKLPEKSSEVKLPPTHELWSTGVMGQKLLVESAGSRLENSENGSGELHHFLHQYNQQSPSPNQNLQGNIPLPLSPQSLRHDGSSGIGIKREPEDLSSSRGAQQSKRHKQAQPDSPTPPGMYHHHQQQQQQQQQQQQHQLQVQQYGSPYDPYSACSPRLSTYNSGSNASGSATPGLHQGEGNTVYVTSEALPPLASSSSAALSTTTTSYTRYEVVPSSYTTHAIRSSSSSSKVLTVDLPSPDSGIGADAVTPRQDHHPPTALHQSSFDYTELCPSNNNNATTVVLESGAVVHHQPLQLQLQQSHNQSQVQRGLVNPSASASPSTTPNPPRSRPWHDFGRQNDADKIQIPKIYSAYGFKYHLESPISTSQRREDDRITYINKGQFYGITLDYVPDPDKPLLKTGQTVKSVVMLMFREEKSPEDEIKAWQFWHGRQHSVKQRILDADTKNSVGLVGCIEEVAHNAIAVYWNPLESSAKINVAVQCLSTDFSSQKGVKGLPLHVQVDTYEEPPSHSHSYTPPSHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHSVTERSEFYSMADLHKPPVLFSPPAEHALDKQFSTMELSGFYGAGNGGGDTDTSSLSNGEGGMKTGTSSPYPGCGRPSLPALKFHNHFPPDNLTGIHDKKDSLLMQVQELQGTVLQGVPPGALTSTAGTLVSSVSNRLHLQHQTQQSHLRGNDSEERVMLYVRQESEDVYTPLHVTPPTVQGLLNAIESKYKIASSSINNLYRKNAKGITAKIDDDMIRHYVDEDLFLLEVSHSTTPANPECNQSNPGSPGDPDDPNDSSSIGYDVTLIKLQTQLTPPPPSLSSSTSPATVNSHIHGHVHEVTNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00379404;
90% Identity
iTF_01003987;
80% Identity
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