Basic Information

Insect: Cotesia flavipes
Gene Symbol: L
Assembly: None
Location: scaffold:1258-7656[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.32 31 5.2 3.9 1 23 58 80 58 80 0.97

2 17 5.2e-07 5.1e-05 23.5 2.3 1 23 86 108 86 108 0.99

3 17 2.5e-05 0.0024 18.2 0.9 1 23 114 136 114 136 0.98

4 17 3.5 3.4e+02 2.0 0.2 3 23 207 229 205 229 0.80

5 17 0.38 37 5.0 0.6 6 23 274 291 268 292 0.90

6 17 0.11 11 6.7 0.1 2 22 319 339 318 341 0.85

7 17 0.25 25 5.6 0.3 3 23 382 402 380 402 0.95

8 17 0.00089 0.088 13.3 0.2 3 23 416 436 414 436 0.96

9 17 8.4 8.3e+02 0.8 0.6 3 23 450 471 448 471 0.87

10 17 0.02 2 9.0 0.1 1 23 476 499 476 499 0.95

11 17 0.87 85 3.9 0.0 9 23 536 551 534 551 0.92

12 17 0.018 1.8 9.2 4.7 2 23 595 616 594 616 0.97

13 17 3.2 3.1e+02 2.1 0.1 1 9 621 629 621 636 0.82

14 17 9.5e-05 0.0093 16.3 0.3 2 23 646 668 646 668 0.96

15 17 0.13 13 6.4 0.1 1 13 678 690 678 701 0.78

16 17 4.4 4.4e+02 1.6 0.2 2 23 709 730 708 730 0.94

17 17 0.00061 0.06 13.8 0.3 1 23 1031 1054 1031 1054 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.32	31	5.2	3.9	1	23	58	80	58	80	0.97
2	17	5.2e-07	5.1e-05	23.5	2.3	1	23	86	108	86	108	0.99
3	17	2.5e-05	0.0024	18.2	0.9	1	23	114	136	114	136	0.98
4	17	3.5	3.4e+02	2.0	0.2	3	23	207	229	205	229	0.80
5	17	0.38	37	5.0	0.6	6	23	274	291	268	292	0.90
6	17	0.11	11	6.7	0.1	2	22	319	339	318	341	0.85
7	17	0.25	25	5.6	0.3	3	23	382	402	380	402	0.95
8	17	0.00089	0.088	13.3	0.2	3	23	416	436	414	436	0.96
9	17	8.4	8.3e+02	0.8	0.6	3	23	450	471	448	471	0.87
10	17	0.02	2	9.0	0.1	1	23	476	499	476	499	0.95
11	17	0.87	85	3.9	0.0	9	23	536	551	534	551	0.92
12	17	0.018	1.8	9.2	4.7	2	23	595	616	594	616	0.97
13	17	3.2	3.1e+02	2.1	0.1	1	9	621	629	621	636	0.82
14	17	9.5e-05	0.0093	16.3	0.3	2	23	646	668	646	668	0.96
15	17	0.13	13	6.4	0.1	1	13	678	690	678	701	0.78
16	17	4.4	4.4e+02	1.6	0.2	2	23	709	730	708	730	0.94
17	17	0.00061	0.06	13.8	0.3	1	23	1031	1054	1031	1054	0.95

Sequence Information

Coding Sequence: ATGGTTTTTATAGAAGGACTAATGAATGGAAGTTACTCATGGCGCAGTGAAGACGATAGCCTTAATGGGCAGAGGGGTGGCGGCACACCATCTTCTTGTACGACTTCTACATCACTGAGTTTCCCCTCAGAAACAGAGACTGACGTTGATACTCATGGTGATCAAATGCCGTACCGTTGCAGCTGGTGTGCTAGATTGTTTAAACACAAACGCAGCAGAGATCGTCATGTAAAATTACATACCGGTGACAGAAGATATCGTTGCACACAGTGTGAAGCTGCATTTTCACGAAGCGATCATCTAAAAATTCACATGAAAACTCACGACAACCAAAAGCCGTATCACTGCAGCGAGTGTTCTCGTGGTTACAACACAGCAGCGGCATTAACATCGCACATGCAGACTCATAAGCGTCCTCAGTCACTGCAACTAACAAATTACCCCTCAAAGATGTCAGAAAACGAACGAAGTTCTCTGTGGCCAAGCAGAGGATCATCCCCAAGTGTCAGTTCACCACTACTCTCGTCTCACCACAAGCTACCACCCTACTCACCAGACTCCTCGGCGAACGAATCGTCCCCCGCAGTGTCATTTCTCCGGTCATCTCTGACCCTCGCGTGTATGTACTGCACCAAAGACACTTTCACGAGCATGGAGCAGCTCCAATTGCACGTCCAAGCTGTCCACGAGCTCGCTGTGAGCACCCTCAGCCCCTCATCCTCGCCTAATAAAATCACCGATAACAATTACAAGCGGCGTAAAAAAAAAGATTTTAATTTAAAAATAAAGGACGAATTGTTATCGTGTGTCGACAGCGCGTGTGCTATGAAATTCACAAAATTAAATCTATTAAACGAGCATATTAGAGCTCATCACAGTAATAATGATAAAGCTCCGATAAATAACTATGATAATGACACATCAGCATCAGCAACGGAATCAGCATTTACGTTATCATGCCCTTTGTGTGGGTTATCGTGCTCATCTCCTGCAGTCTACGCTGAGCACTACGTTCTCGAGCACTGCGAAAATCGGCGAGTTATCGCTGATAAATCGTCAGAAAAAGCTAATTACGGTAAAAAAATATCCAACGATAATAGCAGCAATTTAAGCGCGGGGGTTTTTTCTTCTAGTACTTTGCTTTGCGGGCAATGTGGAGCGGCATTAAAAGACTTTGAGTCCTTTCGTGTTCACCTGGCGCATCATTTGCAAGTAAATAATTACCAGAAGCAATTCAGTGTAAATTGCCCCAAGTGCGAGCTGATTTTCACCTCCCAGGACGAAATGGTCAATCACTTGACAAAGCACTATCTGAGCGACGAAAAAATTTTAAAGCACCAGTACTGGTGCGATGCGTGTGATAGACACTATTTAGACATTGAGTCACTGAAAAAGCACACATTTGAGGAGCACACGCAGCGCTTGTACAGATGCAGTGTGTGCAGAGAGATCTTTGAGACGGCTGTTGGCATTCAGGTGCATTTAACTGTTAAGCACACACGGGAGTGCGCTGTTTATCAGTGTACGGATTGTGTAAATAATCCGGGATCCACAAAAGGGATAGAGACAGTGGGTAGTGATAAGAATGGAATAGAGAGAGACGGTGTCTTTAAAAGTTCCACTGAGCTGATGAAACACGTGATGAATGCTCATTTGTCGTGTTCCTCGTCGTTGGCATTATCATTATCGTCTGCCAAGGCTCAGGATCGGATTACTCAGATAAAGGGCAGAATCGGTCCAGCTGCACCAGAAACAACCAGAGCTTGCGGTGAATTATTTTTACGATGCTGTTTTTGTGGTGTACATTGTAATACGGAAGCTGATTTACAGCGACACTTGGCAACCCACTCGACGTGCCTTTATAGATGCCCGATTTGTCGTCAAGTAGGAAATAATCTCCAGCATCAACTAAAATCATTATCGCAAAATTTAGAAAGCTGTAGTTATTGCGGTGAATCACTGCGTTCACGCGGCGAATTGGAAACTCACACAAGGATCTACCACCCGGCGAATGAATTAGGAAAACGCCGATACAAATGTAACATATGCGATGAATTATTTTCCACAGGGGGTATTTTGGCAGAGCACAAATTAGACAAGCACTGCAAAATAAAGTTGAGCGATGTTTGCACCGTTTGCAGAGTTATTTTACACAGCGAAGTAGATTTTATCGAGCACGTACAGAAACACAGTTTCGAAGCGATTGATTCGTACCAACAAAGACACGAAACCGTGGCATCAGCTCCCGTTTCAGCAAGTACTCAAGCAATTTCTGTTACAAATACTGCTACAAATACTACTCTTATCTCTAATAACTCTAATGCTTGTATTACAGCAGCAAATACTCATGTGCCCGTTTATTGTGTTGTCTGCAGGCAGACTCTCATTAGCGAATTCGAATGTCAATTACATGCCAGGTATCATTTACGATCCCAGTCTTCTGTTTCAATTACGGAAAATAATAATAGTAATAGTAATAATATTAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGATAATATTCGTAAGGAATTAATAAATAACATTATCAATTGTTGTATTTGCTTACGCGAATTTGATAATATTAATTCTGTTATTCCCTTATCAAACAACGTTACAAGTAATGAAAGGCAATTAAATGTTTGTAACAGATGTTATGAACGTCATTTGAATGGTTTACCTATTTTAGGTAATAATTTTTATAATGATAATGATTGTAAAGTGCGTGAAAATTTTGAGCGAAGAAATGTTGAAAATTATTGTAAATTAAAATCCATTAAATTAGAGTGTGTGAATGAAGAAGATGATAATTGTAATGATGATGAAGATATTGATGTTGATGTTGGTATTGATGTTAATAATGAGGAACAAGAAGAAAAAGATAAAAGAAATGAAGGAGAGAATGAAAATGAAAATAACCATGAAAGAGAAGACGATAGTATTTATAATGAAAATAAGAATAAGGAAAATAAAATAGGAGTGAGATTTGAAAATAATTCACATGAGAAAAATAGCGCTGGCGTCCGTCCATATAACTGTCCTCAATGTAACCTCAAGTTTGCTCTTAAAGTTGAATTGGAGCATCACCTTAATGCTGTACATATGAATAAAAATATGTCTTGTATGGTTAATGCTACGTCGGGGAGGAAAAATAACTCCCGAAAAGAGGAAGAAGGGCATTCACGTGATGCTAATATTAAAGACAATGCCAGTGAAGATGGGCTGATTGTCAAAGAAGAAATTTTTGATACCGAGGTTGAAGAAGGAAATTGTGAAGAAAGAATATTGATGAATTGA
Protein Sequence: MVFIEGLMNGSYSWRSEDDSLNGQRGGGTPSSCTTSTSLSFPSETETDVDTHGDQMPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCTQCEAAFSRSDHLKIHMKTHDNQKPYHCSECSRGYNTAAALTSHMQTHKRPQSLQLTNYPSKMSENERSSLWPSRGSSPSVSSPLLSSHHKLPPYSPDSSANESSPAVSFLRSSLTLACMYCTKDTFTSMEQLQLHVQAVHELAVSTLSPSSSPNKITDNNYKRRKKKDFNLKIKDELLSCVDSACAMKFTKLNLLNEHIRAHHSNNDKAPINNYDNDTSASATESAFTLSCPLCGLSCSSPAVYAEHYVLEHCENRRVIADKSSEKANYGKKISNDNSSNLSAGVFSSSTLLCGQCGAALKDFESFRVHLAHHLQVNNYQKQFSVNCPKCELIFTSQDEMVNHLTKHYLSDEKILKHQYWCDACDRHYLDIESLKKHTFEEHTQRLYRCSVCREIFETAVGIQVHLTVKHTRECAVYQCTDCVNNPGSTKGIETVGSDKNGIERDGVFKSSTELMKHVMNAHLSCSSSLALSLSSAKAQDRITQIKGRIGPAAPETTRACGELFLRCCFCGVHCNTEADLQRHLATHSTCLYRCPICRQVGNNLQHQLKSLSQNLESCSYCGESLRSRGELETHTRIYHPANELGKRRYKCNICDELFSTGGILAEHKLDKHCKIKLSDVCTVCRVILHSEVDFIEHVQKHSFEAIDSYQQRHETVASAPVSASTQAISVTNTATNTTLISNNSNACITAANTHVPVYCVVCRQTLISEFECQLHARYHLRSQSSVSITENNNSNSNNINNNNNNNNNNNNNNNNNNNNNNNNNNNNNNDNIRKELINNIINCCICLREFDNINSVIPLSNNVTSNERQLNVCNRCYERHLNGLPILGNNFYNDNDCKVRENFERRNVENYCKLKSIKLECVNEEDDNCNDDEDIDVDVGIDVNNEEQEEKDKRNEGENENENNHEREDDSIYNENKNKENKIGVRFENNSHEKNSAGVRPYNCPQCNLKFALKVELEHHLNAVHMNKNMSCMVNATSGRKNNSRKEEEGHSRDANIKDNASEDGLIVKEEIFDTEVEEGNCEERILMN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -