Cfla017311.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cotesia flavipes
Gene Symbol
ZFAT
Assembly
None
Location
scaffold:24851-33358[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.00084 0.082 13.4 0.6 1 23 70 93 70 93 0.91
2 14 0.00065 0.064 13.7 4.1 3 23 235 256 234 256 0.93
3 14 0.0013 0.13 12.7 2.1 2 21 261 280 260 282 0.94
4 14 5.6e-05 0.0055 17.1 1.8 1 23 316 339 316 339 0.95
5 14 0.014 1.4 9.5 0.2 1 15 399 413 399 416 0.83
6 14 0.02 2 9.0 1.3 1 23 507 530 507 530 0.97
7 14 0.12 12 6.5 0.3 2 23 549 568 549 568 0.83
8 14 0.00038 0.037 14.4 7.1 1 23 574 596 574 596 0.99
9 14 0.00015 0.015 15.7 3.4 1 23 602 624 602 624 0.99
10 14 0.0046 0.45 11.0 1.5 1 23 630 652 630 652 0.97
11 14 0.0004 0.039 14.4 0.9 1 23 658 680 658 680 0.99
12 14 4.8e-05 0.0047 17.3 3.1 1 23 686 708 686 708 0.99
13 14 0.44 43 4.8 6.9 1 23 714 736 714 736 0.99
14 14 1.1e-05 0.0011 19.3 3.0 1 23 764 787 764 787 0.97

Sequence Information

Coding Sequence
ATGTCAAATGAAGATTTTGTTTTTTTGTCAGAGTGTTTAGGAATTCACTTAGAAGAATTAAAAAAAATCGATGTTCCTCAAGAAAGTATAATTATTACTTCACTCATTGATTGTTGTTCATCGGAGATGGACACTCCGGAAAATACCGAACTCTTTGTTGGCAATGATACAATAGATCAGTATCATTATGAAATCCACAGCGTTGAATACATTTGCCAAGATTGTGGTGAATCCTTTAGCTCTCCAGATTTACATAGACAGCACGAACTGTCTACGCACTTAAACATTGAAGTCAAGACTGAATTCGACACTACACATGACGACTGCAATATAGATATTAAAGAGGAACTTGATTGGAAATATTCAATTCCCAAAGAAAGTAGTATGGAGAAAAATACAGCCGAGTGTTTACTTGACAGCTACAAATTTTCAGAAGACAATATTTTTGAATCTTACAAAGAAGGTGATTACACCTCCAGCATTCCCGAGGAATTTAATGAAGATATCCACGAGCACAAGAGCAACTTCACTCTTAGTAATAAATTGGACCAGAAAATTAATGAAGATAACAAATTAAAAGTTAAAGTAAATAGTTATAAAAACAATCAATTTTTTGATTGTCACTTTTGCAAATATAAAACGCTGGCGCCAAATCGACTTGAAAATCACGAAAACTTTCATTTAAACCCTAACGTAGCTATTTGTGATCATTGTGGTCGATGTTTCAAGTCAAAAATGTCTGTTGAAAAACACTTGACACTCTATCACAATTTAGAATCTCAATGTGATATTTGCCAACAAAAGTTTGTTGATCAAAATGATTTGCAACTTCACTTGAAATGTCATCGAAGAGGAACATTTTATTATTGTGATTTATGCCAATTCAAAGCTGTAAGATTACTTAGTATTAAAGATCATAAAACCCAGCACATGAGACCTGAATGTTATGTTTGTGATCATTGTGGTCGACCATTAAAGTCCAAAATTTCTCTTCAAAAACACTTGAATTTCTACCACATGAAACCTCATCTCTTTACTTGCCTGAAAACTCTTGAAATTCCTAAAGAAAGTCCTATCACATGCTCCGTCGAAGATGCTCCTTTGGAAAACCAAGTGGAAACAATTCCAGAGATTATTGGTAACATTAAAATGGATTCGGAAGAAACATTTTCATATACACTCAAAAATGTCGAATATATTTGCCAAGATTGCAACAAATCATTTAACTCAGTCATATACTTAACAGAGCTACATGCGGCCCATACTCAGGAGTGTCATGTTCATGTAGAGTCTCATAAGTCCACTGGAGCAAAAAATCTCGGGAAATTTCTCAAAAATATGATCGCTGTGAGTGCTCGAATTCCAACTGAGGACAATAGCTTAATGGTTACACCTGCCCGTGAAGATAATAAAAGTTTGTTGCGTCTTTCTGAAAATAGATCAAGCGTTAATAGAAGTACAAAACATGGAAATTCACCTACATCCAATAACCCGATGTATACTAGAGAAAAAAATTATTACGCTTGTCAATTGTGCGATGCGAAATTTTTTAAACGTAAATATATTCTCGAACATATTCGTAGAAAGCATTCCAACCTGCCCAGTTCGACGGAACAAAAGCCAACAATTAATCAAATTTCGGAGAAATGCCCCGAGTGTGATTTTGTGACTATGTGGAATTTATCCCGTCATATGGCCCGACATAGCTCTGATCGACCTTATAAATGTTCTCATTGCAACTATTCTAGTAAAACTAAGTGTACGTTGAAAATTCATATTCTCACTCATTCAGATGAGAAAAATTTTAAATGCTCAGTATGTCCATATCGCAGTAAATTTCTATCTTGTTTGCAGCGGCACATTCGTATTCACACTGACTTTCGTCCCTATAAATGCAGTCAATGTTTATACGCAACTGCCTATTTAGATAATTTAAAGCGGCATAGTTTTACTCACACTGGTATTCGTCCCTTTAAATGTTCAGTATGTTCCTTCAGCAGTATAACTTCTCAAGGTCTTCGGGTTCATTTAAAAACTCATAATACTATAAAATCATTTAAATGTACTCAATGCTTGTATGCCACTACAACGAAATACAATTTGATACGGCATACTCGTAGGCATTTAGGAGAAAAACTTTACAAATGTTTACATTGCTTATTTTCAACCAAAACTTTGAGAACTTTCGAGGAACATTTGTGTACTCATGAAGAAAAAGATTCATCTGACACAAATACAAACGAATCAGAAATACAATTAAAGAGTTTAAATAATACAACAAAACAATTGTATTCTTGTTATGATTGTAAAATGTCATTTAAAAGAAAAACATCATTGGAAAAGCACTGGAAGTCGCAGCATTATTTCTAA
Protein Sequence
MSNEDFVFLSECLGIHLEELKKIDVPQESIIITSLIDCCSSEMDTPENTELFVGNDTIDQYHYEIHSVEYICQDCGESFSSPDLHRQHELSTHLNIEVKTEFDTTHDDCNIDIKEELDWKYSIPKESSMEKNTAECLLDSYKFSEDNIFESYKEGDYTSSIPEEFNEDIHEHKSNFTLSNKLDQKINEDNKLKVKVNSYKNNQFFDCHFCKYKTLAPNRLENHENFHLNPNVAICDHCGRCFKSKMSVEKHLTLYHNLESQCDICQQKFVDQNDLQLHLKCHRRGTFYYCDLCQFKAVRLLSIKDHKTQHMRPECYVCDHCGRPLKSKISLQKHLNFYHMKPHLFTCLKTLEIPKESPITCSVEDAPLENQVETIPEIIGNIKMDSEETFSYTLKNVEYICQDCNKSFNSVIYLTELHAAHTQECHVHVESHKSTGAKNLGKFLKNMIAVSARIPTEDNSLMVTPAREDNKSLLRLSENRSSVNRSTKHGNSPTSNNPMYTREKNYYACQLCDAKFFKRKYILEHIRRKHSNLPSSTEQKPTINQISEKCPECDFVTMWNLSRHMARHSSDRPYKCSHCNYSSKTKCTLKIHILTHSDEKNFKCSVCPYRSKFLSCLQRHIRIHTDFRPYKCSQCLYATAYLDNLKRHSFTHTGIRPFKCSVCSFSSITSQGLRVHLKTHNTIKSFKCTQCLYATTTKYNLIRHTRRHLGEKLYKCLHCLFSTKTLRTFEEHLCTHEEKDSSDTNTNESEIQLKSLNNTTKQLYSCYDCKMSFKRKTSLEKHWKSQHYF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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