Basic Information

Insect: Cotesia flavipes
Gene Symbol: ZNF341
Assembly: None
Location: scaffold:28806-32070[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.21 21 5.8 7.8 1 23 45 67 45 67 0.98

2 13 0.00028 0.027 14.9 6.1 1 23 229 251 229 251 0.99

3 13 1.5e-07 1.5e-05 25.1 0.4 1 23 257 279 257 279 0.98

4 13 0.0094 0.92 10.1 1.3 1 23 304 327 304 327 0.96

5 13 0.019 1.9 9.1 0.4 1 23 333 357 333 357 0.96

6 13 6.3e-06 0.00062 20.0 0.5 1 23 362 384 362 384 0.98

7 13 0.0038 0.38 11.3 4.0 1 23 396 420 396 420 0.91

8 13 0.0002 0.019 15.3 2.0 1 23 422 444 422 444 0.98

9 13 5e-06 0.00049 20.3 0.2 1 23 450 472 450 472 0.96

10 13 1.6e-05 0.0016 18.8 0.2 1 23 478 500 478 500 0.97

11 13 0.0077 0.76 10.3 0.3 5 23 515 533 506 533 0.79

12 13 0.0033 0.32 11.5 2.6 1 23 539 562 539 562 0.95

13 13 0.021 2 9.0 2.0 1 19 564 582 564 585 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.21	21	5.8	7.8	1	23	45	67	45	67	0.98
2	13	0.00028	0.027	14.9	6.1	1	23	229	251	229	251	0.99
3	13	1.5e-07	1.5e-05	25.1	0.4	1	23	257	279	257	279	0.98
4	13	0.0094	0.92	10.1	1.3	1	23	304	327	304	327	0.96
5	13	0.019	1.9	9.1	0.4	1	23	333	357	333	357	0.96
6	13	6.3e-06	0.00062	20.0	0.5	1	23	362	384	362	384	0.98
7	13	0.0038	0.38	11.3	4.0	1	23	396	420	396	420	0.91
8	13	0.0002	0.019	15.3	2.0	1	23	422	444	422	444	0.98
9	13	5e-06	0.00049	20.3	0.2	1	23	450	472	450	472	0.96
10	13	1.6e-05	0.0016	18.8	0.2	1	23	478	500	478	500	0.97
11	13	0.0077	0.76	10.3	0.3	5	23	515	533	506	533	0.79
12	13	0.0033	0.32	11.5	2.6	1	23	539	562	539	562	0.95
13	13	0.021	2	9.0	2.0	1	19	564	582	564	585	0.90

Sequence Information

Coding Sequence: ATGGCACAGTCTATTTTTGATGCACTATCAGGCGTCTCTCTGGACAGTTCTACTGTACAATCATTGCTCGAATCACAAAATCTCATGCCAGATATCGAACAACCAGGAATGGATCAAGATGAAGAGGACATTTTTCAATGTGGTAAATGTAAATGTCAATTCACGTCGTTGCACATGTTTTTGTTACACAAAAAATCGCATATAAAAAAACAAGAACAGACTGTTGATATAAGTCAGTATTTAATAAGTGATAATAGTCAAGTACAAGTACACAATGAGAATCCATGTCAAGATCCTACTACTCAGTACAATCCGACAGAAACATTTATCCAAACTAATCAACTCACCGAGCCGATAATACTTGAAGAATCTGACATGTTGTTCAGTATGGATCAAGAAAACTCGAGCTATCTCACAGCAGATGCTGAGTTTGGAGTACCAATTATTCTCAATACTGAAAATCTTGAAAACTTCACAGCGCCGTCATTGATATCCGATGATAATTTGCTGAAAGATGATAGTAACGATGTACACCAGTCACGAACAAGTGACACAGCGTGTCAGGGTGATGTTGGTTATGATGTTTCTCCTAATGAAATTGTGCCAATTGATAATAATATTATAGATGATATTGTGGATGGTTTAGAAAGTCAAGATAATACCAATCCACCATTAAATTTAAAGTACAAGTGCAATTACTGCCACAAACAATTTGCTAAAAAGTTTTATTGGCAGCAACATGAACGTTCTCATACAGGAGAGAAGCCTTATCAGTGTGTTGTTTGCGGACGTGCGTTTGCACAAAAGTCGAATGTTAAAAAACACATGTCATCGCACAAAGTATGGCCCGGTACAGCCATACACTCGCTACCTCCAGAGGCACCACCTGATGGAAGTATTGATCGTACTTATCATTGCCAATTTTGCAAAGAAATATTTGAATCGTACAAAGCACTAAAAGGTCACTTGATAGTATCACATATGACATTGAAAGTATACAAATGCGTACAGAGCAGTTGTAGTATGATGTTTGCTGACTTAGATGATTTTCTCGAGCACACAAGAAGTCATAAACGTTCAGAATATCGTTGTCATGTATGTGGTGAAGTATTTAATACGCTTTCAGATCTTGGTCTTCATCAGTATGTCCACTCCGTCCAAAAACAGAAGACAACTGAAAAGTATTACTGCTGTACTGTTTGTAAATCATCATTTTCAAATCTTGAAGCGCTTCAACATCATACTGAGACTACGACACACGATTATGCATGTCCCCATTGTGGTAAAAGTTTTCTTATTGAACGATTTTTGCGGCGACATCTCAAAACTCATGTATCTTCAGCTAAATTTGCCTGTGAAGATTGTGGTAAAGCTTTCAAAACGGAGCAATATCTTGCCAATCATAAACTTATTCACAGTGAAGAAACTCCATTTATTTGCCCTCAATGTCCAGCAAGATTTAAACGCAAAGATCGGTTGGGACGTCATATGCTGATTCATGATCTTAGTAAAAGATTGAAATGCCCGTTCCGTGGATATCTCGGTTGCATGAGTGAATTTTCACGGCCTGATAAACTCAAAAGGCATCTTCTTACACACAGTAATATCAAACGATTTACTTGTACTCAATGCAATCGTGATTTTAATCGTGCTCAAGCAATAAAACATCATGAAATGAGTAAACATATATTCAAATGTGACGTTTGCTCAGAGACATTTAAAAATAAAGATATATTAAGTACACATAATTGCAATCAAACTGTTGAAACAAAAAAATATACAAGCTCACAGTTACCTCGAAAAGTCTTTGGCACTTTTAAACCAAGAAAACCGACACCAAAGCGACAAATGGTAACTAAATCTACAACTGCTGGACTTACGGTTACGGATAAGGAGAAAATAAAAACTGATCAAGTTGATAAACTCACGGTTGAAGAAACACAAAGTAAAAGAAATATGATGGAAAATTTCACCATTTTAGAAGATATGAATTCAATTAATAGTTTAATAAAATCAGATTCATCAGATGAAGAAGAAGAAGAAGAAGAAGAAGCAGTTATTAAAAAAATTGAAGACAATGAAAAAGATATGGCAGCTGAAATAAATTTTCAGTCGATACAATAA
Protein Sequence: MAQSIFDALSGVSLDSSTVQSLLESQNLMPDIEQPGMDQDEEDIFQCGKCKCQFTSLHMFLLHKKSHIKKQEQTVDISQYLISDNSQVQVHNENPCQDPTTQYNPTETFIQTNQLTEPIILEESDMLFSMDQENSSYLTADAEFGVPIILNTENLENFTAPSLISDDNLLKDDSNDVHQSRTSDTACQGDVGYDVSPNEIVPIDNNIIDDIVDGLESQDNTNPPLNLKYKCNYCHKQFAKKFYWQQHERSHTGEKPYQCVVCGRAFAQKSNVKKHMSSHKVWPGTAIHSLPPEAPPDGSIDRTYHCQFCKEIFESYKALKGHLIVSHMTLKVYKCVQSSCSMMFADLDDFLEHTRSHKRSEYRCHVCGEVFNTLSDLGLHQYVHSVQKQKTTEKYYCCTVCKSSFSNLEALQHHTETTTHDYACPHCGKSFLIERFLRRHLKTHVSSAKFACEDCGKAFKTEQYLANHKLIHSEETPFICPQCPARFKRKDRLGRHMLIHDLSKRLKCPFRGYLGCMSEFSRPDKLKRHLLTHSNIKRFTCTQCNRDFNRAQAIKHHEMSKHIFKCDVCSETFKNKDILSTHNCNQTVETKKYTSSQLPRKVFGTFKPRKPTPKRQMVTKSTTAGLTVTDKEKIKTDQVDKLTVEETQSKRNMMENFTILEDMNSINSLIKSDSSDEEEEEEEEAVIKKIEDNEKDMAAEINFQSIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00379096;
90% Identity: iTF_00381315;
80% Identity: -