Cfla004975.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cotesia flavipes
Gene Symbol
-
Assembly
None
Location
scaffold:8500-23997[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.0062 0.6 10.6 1.5 2 23 992 1014 991 1014 0.92
2 19 0.014 1.4 9.5 1.3 1 23 1018 1040 1018 1040 0.98
3 19 0.017 1.7 9.3 4.6 1 23 1180 1202 1180 1202 0.98
4 19 0.023 2.2 8.9 0.4 1 23 1417 1439 1417 1439 0.98
5 19 0.00079 0.078 13.4 0.1 1 23 1444 1466 1444 1466 0.98
6 19 0.00016 0.016 15.6 1.2 1 23 1554 1576 1554 1576 0.96
7 19 0.00016 0.016 15.6 0.4 3 23 1582 1603 1580 1603 0.94
8 19 0.0001 0.0098 16.3 1.8 1 23 1895 1917 1895 1917 0.98
9 19 8.1e-05 0.0079 16.6 1.4 1 23 1921 1943 1921 1943 0.98
10 19 0.0066 0.64 10.5 5.8 1 23 1948 1970 1948 1970 0.96
11 19 0.00067 0.066 13.7 4.4 1 23 2023 2045 2023 2045 0.97
12 19 0.00016 0.015 15.7 2.2 1 23 2050 2072 2050 2072 0.97
13 19 0.00027 0.027 14.9 2.2 1 23 2127 2149 2127 2149 0.98
14 19 0.00036 0.035 14.5 1.0 2 23 2157 2178 2156 2178 0.97
15 19 2.7e-06 0.00026 21.2 2.1 1 23 2189 2211 2189 2211 0.96
16 19 0.00095 0.093 13.2 1.3 1 23 2217 2239 2217 2239 0.97
17 19 0.00043 0.043 14.3 0.7 1 23 2245 2267 2245 2267 0.98
18 19 1.3e-05 0.0013 19.1 2.0 1 23 2273 2295 2273 2295 0.96
19 19 0.00023 0.023 15.1 0.3 1 22 2301 2322 2301 2322 0.96

Sequence Information

Coding Sequence
ATGAGTGCCAGTTACAATTGTGTGTCATTAGACGTGTATGTGGACAACAACACACGTGCAGCAGTTACAATTACAAAAATGACGGGCACATGTCGACTGTGTTTGAAAGAATCAACAAAATTATCGCCTATTTTCTGCAATACACAAGGACGAAAACATTTTTTTGATCTCTACCGTAAAATATTCGTTTGCTGTGGTATTGATATCAATGAATATGATGAATTATCATCATTTATTTGCAATGAATGCGTGACCAAACTCAATGCTGCATATGATTTTCGTCTGTTATGCCAACGTTCTAGTTCATCATATTGTCGATTGCAGTCTCATACTTCCAAGGACTGTATATGTTCGAATCCGAACGCTGAAACAGAAATTCCAAAAGTCAAGAAGGTAATGAAAATTTGCCAGTCAACGAACATTCATGGAAAATACCTCGAGAGAGTAGTCGAAGAGATACAAGAAGAAATACATGATAGTTTCCAGGTTAATGGGATATCAACAATAAATAGTCATGATAATCAGGTTAATGGGTTATCAGCAAAAAATTCTGATGAGCAAAGTGATAATTCGCCTGATGTAAGCACAACAGCTCGTCCAAATTCTAGTACCGTTAAGAGTAGTACAACTGGAGTTAGTATTAACCATGAGTCAAGCAAAAGTTCAGAAGAGGGTAATGAAAATGATATTGATAATTTGCCTTATGAAATACGCCTAGAAATGGCTAGACAAAAGTACAAAGATATTTTAATTCTTAATAAGCTCAATATACCTCCAAAAAAAACTGCCGACTCAACTAAACTGACTGATTTTAAACGAAAAGGTGATAACAATAATGTAGATTTTGGTAGTGTAGCTGGTGCAAAACAAAAAGATGTTGACGATGCAAATAATGTTAAAGATATTTATGATAAAAATTCTCAAGTAGCAGATAGTAATAATAAGAGTATTAATCAGACTTGTGAAGCAAATATTGCTAATAAAAATAAAAGCATTGATGAAAATGCTGATGAACAAATTAAAGATACCGATGCAGCAGTTTACGTACAACCGATCATTGTGGGAGAATTCGACCACACTTATGATCTTCGAAAACAAATAATTGTTACTTTTGATGAAAATATTCCAGTTGGTGAAAAAATAGCTATTCAACTTGATGATAATCAAGAAATATCAGCTATTATACTCCAAGACTCTGATCAAGGAACTGCTGCTGAAGAAGAAATAGAAAAAGAACTTGATTCGTTTAAAGGTTTCACCAATGAAGAACAAACTGGGGTCGCACAAGTTGATGAGGGCATTGAAGAACAAGCTATCAATGCTGCCGATCAACGTCGTAATACTAAAGGTGATATACTTGATCAGGATAATTACGTTTCTGGGAAAGGCAGTAGTTTAATTGTTAAAGATAGCGATAGTAGTATTGAAAAACCAAAAAAGTATTTTAAAAATAATCCTCAAGTGCCAAATAATAGTAAGATTATTGTAGATAGGAAAGGTAAAAGTTTATCTTCACGTAAGAGGTCTAGATCTCAAGAATTTCATAATGTTAGTGAATTAAGCAACGTACCTGCTGTTAAACAAGATGAATTTAAACGCCGCAAATCAGGAAAGACAAAAAAGTCTAGTCTCGATATAGTATGTGAAGGTTTAAATCACGATGCATCTCAGGAAGATAGTGTTGTTCACTCTGGTAACAGCATTGAAGTTCAAGCCGAAGTTCATGTTAGGGAACGGAGTCCAGAATTTCCTGAATCAACTTCAAAAATAATTGGATTAAATAATGTAATGCAAGGAGGAGTGAATAGAAACAAATCTCAAAATATGAATAAAGTTAATGTTCAATCTAAATTTGCTGATGATTTTGATCAAATATTGAATCTAGAGGATGACATAGCAATTGAAGTAGCCCATAATATTGAAATATTACCTGATGATGCACTAAGCGTTGACTACACTGTTGGTATACCAGACGATGATATTCAAGACTCGAGTGATAATACCCAAGTGCCTAAAAATAATTTAGCTTTAGTGACAGATGATGATAATAATATGGAGTTTAATCAAAAAAAGAATGGTCGTATTAATAAGGCGAAGAAAGATACGAGATTAAAAAATTCAAAATCTAAATCAGTTGTTGATAATGATGATAATGATAACGAAGAAGAAGAGAGAGACGATGATGAATTGCCTAAAGACAGCAATAATAAAAATAACAAGGTTTTGCTTAAAAACAAGAATAAATCTCGGGGTATTATAGCTGTTAAAAAGAATGTTAAAGTCAAAGTTTTGTCTAAACGTCAATTGAAAGATAAAAGTAAATTTGTGTTCAAGAGACACAAATCCAAGAAAAAGCCGCCCACCGATGACGAATCTACTGAAGATGAGATTGTAAGCAGTAGTGAAAATATCGATGATGGTACATCTGACATTGTCCAAATCGAGAGATCGAGAATAAAACAACCGTCCAGCACCGATGAAAACTTGGTAAATCGGGCAGTAAAAAATAATCACAGCTGTAAGAAATTAGATAAATCACAACGCAGGAAGTCCAGTCCAGTACGTTCTTCTAACTCTGGTATATTAGAAAAAATACAAGAGTGCGGTGGAGTTCAGTTAAGCGAAGAATATGGAACACCTATTTTTATTTGCAAAAAATGTTTTGATAATTCTAAAGTAGCATATAAATTTCGACTTCAGTGTCAGTACTCCGAGACACAACTTCGATTGTTACATGAAAAATTTATCCAGCAATGTATTCAAGTATCACATCCCCAGCAAAACTTAATAGAATCTTCAAACTCACCAACAGGAAGCCAAAACTCATCCAAATTAATAATTGATGAAGTTATTTCAACAAGTAAAGATGGAAATTGTTTAGATGCTCCTTCACAAACTGCAAACAAAAAAGCTGAAGTTGGTAGTATAAGTGAGAACAAATGTGTTAAACGAAAATACAATCGTAAAAAAATTCAATGCCAACGATGTTCTAAAATTTTTATTAGCCAAGAAACTTTGGCTCATCATTTGTTCAATAATCATGGTGAAAAATATAAGTGTCTATGGTGTACAGAGACTTTTGATACTTTAAAGTTGATGAAAAGTCACAAAGTGACCCATGATCTTCGAGAACGTCGTAGACAGCAAAGTTATAGTCGATGTAGTAATGAGTCAGCCAATGGAACTGAAATAACTATTAACAAAAAGAAATTTCGATCTCTGTATGAAGATGATTATGATCATCAACTTTGTATTAACAATAACAATGATGATAAAAGTAAATCATCCACAAATACTGCGAATTTTGTCGAAAATGGAGATTATCAAGAGTTTAACAAAAAGGATATTAATGGAGGTGCTTCTAAAAGTAGCTGGACAGCTAATAATCAATCAATTGGAAGTCAAGACAGTCAAGTTGATGTTAAGAAAAATTATGGACCCAAAGCAACCACAGATGACTTAGAATTAAATGATGGAAAAAAGAAGAGGAAATCTAAAAATTGCTATCATAAAATACGACTTAAGGATTTTATTTTACATAAATGTGAAATATGTCGTTGTGAATTTGAAAACATCAGAAAATTGAATCAACACATACGTAATCATATTTCAAAACATGTCTTGAATATTGATAATATTTGTCGTGTATGTTTGACTGAAAATGCTAATTCACTGTCAATATTCTGTCAAAATGAAACAGATGAAAAATATCGCGATCTTTTAAATAAAATTCAAGAGTCCGGTGGTATTAAAATCACCGAAGATGATGGTTTACCGACACTTATTTGCTCTAAATGTATTAATAATATCAACCTTGCATTTAAAATTCGTCAGCAATGTCAACGCAGTGATACACTGTTAAGATTATATTATAAAAAATTAAAAGAGTCTAACCTCAAAACTATACATTATCAAGAAATTCTCCAACCAGAGTTAATTACACCAGATATTTCACAATCTAGCCAAGATCTGTTTAACTACTTAGAAATCCAGAGTATGGACGTCGAAGAAGTTGTTGTTGGTCAAGAAGAGGTCCCAAGTGTTGAGAGTGCTGGAATGACTGACGACGAACCACCGTCTTACAAGTTAAAATTGCAATTACTTGAAATTGGCAGTACAACGAGCAGTTCACCGATTACAAACTCGCCAAACTCGCGTACAAAAGCTCAGAGTAAAGTATATCCCGAGCACCTAGGAGCTTTTGAGAATTTAGCTTTTGATCCGCTTCAGTTGCCGAGTGATAAAAAATATACATGTTCAATCTGCGCTCAGGCGTTCGAGACGTTAAAAATATTAAGACAGCACCGAAAAATTCACAAAGATGAGTTATATGTTTGTAAAATCTGTCCTGTGCGTTGCGCTAAGGCTGACGAGCTGGCAATTCACTTGAAATCGCATCAACTAACCCAAGCAGCAGTCGCAACTATTCAAGTAAACAATTATGACAATTCCAAAGACTGCAATGACTCCGATGTGGTCAACGATCAGCAAAAAATTGATCATTGCAACGAGCAACTACTCCGTGACAAGTCACCCGACCTTAACGACTATACTACTTACCGTGTTAAAAAGTCTACGATCAAAGGATTATCCCCTGATAATATTAATACAAATAATAATATCAATAGTAATATTAACGATACTAATAGTCCTATCATTCATAAGTGTGAGATTTGTGGGCAAATATTTTCAAAAGAAAAAGGACTGATGCGGCACCGAGCTTATCACGAATCACGAGTTATTTGTGATATTTGTGGTAAGGTATGCTCTAATCAAAATTGGCTAGAGTCTCATAAAAAATTAGCTCACAGTGGTAAAATAGATATTTTAATAAAAAATATCATAATGACCGAGTGCTACCTGGATTTCGATACAGTTTGTAGAATATGTTTAACAGAATCAACAAATTTAACATCATTGTATTGTAATGATTCGGTACCAGGTGTTTTTCCAAGTTTATCACAGCGTATATCAACATGTGGGGCTATTGAGCTTAATGAAAGAGACGGATTGCCATCGTTAATTTGTGAGAATTGTATTTATAAAGCAAGTGTTGCTCATGATTTTCGTGAACAGTGTCAGAATTCAGATGCACGATTACGTTTGTGTTACGATAAACCAGCTCGTCTACAATTAAGTTTGCAGGACTCCAGTACGCAAACAGAAGTTGAAGAGAGAACGATGGCTAAAAATGTAAATTCAAATTATTTTGTAAAACAAGAAATTCAAGGGTTCAATCAAGATTTAAATACAATAGGTGTTTACCAAAATCCCCAAGTTGAAGTTACAAACAATCAAATAGTTTCTGACGATAAACTATTCCTATCTGTCGCTATTGAAACAGAGCAACAATTACCAAATTCTGTTACAATAGCTGAAATGAAACCAGCGGTTACACAATACGTGGACAACGATTTGTTGGTTAATAACGATGACAGTGTTGAAGACGAAGATCTTGAGGATGAAGAAGAAGAAACTGAAATTCCAGCTGACGGATTTAACAAAAAGCAAGACATTTCAATTGATTTACACGAACATAAGTGGGAAGAAGAATCAGAGGAATTAGTGCCTAGCAAAAGATTGACGCGCAAGGCTAAGGATATTGCCGGTAAATCATACAGCGTTGATGAAATTGATGAAGATTTACCTGATAATAACGATGACGACGACGATGAGCCAAAATTCAAGTGTAAAGTTTGTTCGAAACGATACAACACATCGAAAGGCCTGAAAAATCATGCCCAAGTTCATGATAAAAAACACAAATGCCCCGTGTGTTTAAAGTCGTTCTACAACCTTGAGAATATGGAAAAACATGTTAAAATTCATGAATCTAAGCCTCATGCGTGTCAACTGTGTCATACATGTTTTGCTAAGCCGCAGACCTTGGTTCGGCATCTCAAGAGTCATTCGGATAAAATTCAGGGTAGCAATAATAATAGTATAAAGAGCAATGAAAACGGAACAATAACGATCGTAAGAACTGAAGATACTGAGGACGACGATGACGATCGTGACGGTTTTCAGACAAATGAAACCGATGAATTCGACAGTGCGCCTGGTCTGTACAAGTGCAGTGAATGCAATCAGTTTTGTTCGACATTGAAGAATCTCAAAAGACATTCATTGATTCACGGTGATAAAAAATATTCCTGTACGGTTTGTAAAAAATATTTCTTCCGACCAGATACGCTGAAGAAACATGCTGAAAAACATGGTCACGGTTTACTGGACAATTTGTCAGACGAGAACAAATTGTATGAGTCCGACGATGAAACATTCAATCGCAGTAATACGCTGGCTAATAATATCAACGGCAATGGGACCAATGATACTGATAATAAAAAGGTTGACAGTGATGAAGACGGTTCTGGGGAGTACAAGTGTCAGCATTGCGACAAAGTTATGGCAACTAAAAAAGGATTAAGACGGCATGTGTCGATGCATAAGCCAAAAGCAGAGCCAGTAACTTGTGAAATTTGTAAAAAAGTGTGTGCTAGTCAAGCTAGACTGGTTCTTCATCAAAGAACACACAATAAACCTAAGGAAAAAGTACCGCGGGAATATCTCTGTCATATATGCAGTAAAGTATATCCAAGTAATTCATCACTGACCTATCACATGAGAACACATACTGGAGTAAAACCTCATGTGTGTCAAACATGTAACAGCGGTTTTACAACAACGACCAGTCTCGCTAATCACATTCGAATCCATACTGGTGATAAACCCTTCGTTTGCCACGTATGTAGTGCTGCATTTGCTGTAAGCTCGGCCTTCAGACGTCACTTAACTCGTCATACCGGAGAAGCCAATTATCTTTGTAAAACTTGCGGCAAGGCATTCAAAAGACTCAGCACACTGAAGGAACATACCTATACACATTCGGGAGAAAAACCTTATGTTTGTAAAACATGTGGTGCTGCTTACAGTCACAGTGGAAGTTTATTTGCTCATCAAAAACGTTGCAGAGTACAGTATGGTGAAATGGTTACTTCTGAGAATAATCATTCACATGTACCACATCATATTCACGTTAATAATGTACAGACAGCGGTCAGATCACTTGCAGTTATCGGACAAATGTTTTAA
Protein Sequence
MSASYNCVSLDVYVDNNTRAAVTITKMTGTCRLCLKESTKLSPIFCNTQGRKHFFDLYRKIFVCCGIDINEYDELSSFICNECVTKLNAAYDFRLLCQRSSSSYCRLQSHTSKDCICSNPNAETEIPKVKKVMKICQSTNIHGKYLERVVEEIQEEIHDSFQVNGISTINSHDNQVNGLSAKNSDEQSDNSPDVSTTARPNSSTVKSSTTGVSINHESSKSSEEGNENDIDNLPYEIRLEMARQKYKDILILNKLNIPPKKTADSTKLTDFKRKGDNNNVDFGSVAGAKQKDVDDANNVKDIYDKNSQVADSNNKSINQTCEANIANKNKSIDENADEQIKDTDAAVYVQPIIVGEFDHTYDLRKQIIVTFDENIPVGEKIAIQLDDNQEISAIILQDSDQGTAAEEEIEKELDSFKGFTNEEQTGVAQVDEGIEEQAINAADQRRNTKGDILDQDNYVSGKGSSLIVKDSDSSIEKPKKYFKNNPQVPNNSKIIVDRKGKSLSSRKRSRSQEFHNVSELSNVPAVKQDEFKRRKSGKTKKSSLDIVCEGLNHDASQEDSVVHSGNSIEVQAEVHVRERSPEFPESTSKIIGLNNVMQGGVNRNKSQNMNKVNVQSKFADDFDQILNLEDDIAIEVAHNIEILPDDALSVDYTVGIPDDDIQDSSDNTQVPKNNLALVTDDDNNMEFNQKKNGRINKAKKDTRLKNSKSKSVVDNDDNDNEEEERDDDELPKDSNNKNNKVLLKNKNKSRGIIAVKKNVKVKVLSKRQLKDKSKFVFKRHKSKKKPPTDDESTEDEIVSSSENIDDGTSDIVQIERSRIKQPSSTDENLVNRAVKNNHSCKKLDKSQRRKSSPVRSSNSGILEKIQECGGVQLSEEYGTPIFICKKCFDNSKVAYKFRLQCQYSETQLRLLHEKFIQQCIQVSHPQQNLIESSNSPTGSQNSSKLIIDEVISTSKDGNCLDAPSQTANKKAEVGSISENKCVKRKYNRKKIQCQRCSKIFISQETLAHHLFNNHGEKYKCLWCTETFDTLKLMKSHKVTHDLRERRRQQSYSRCSNESANGTEITINKKKFRSLYEDDYDHQLCINNNNDDKSKSSTNTANFVENGDYQEFNKKDINGGASKSSWTANNQSIGSQDSQVDVKKNYGPKATTDDLELNDGKKKRKSKNCYHKIRLKDFILHKCEICRCEFENIRKLNQHIRNHISKHVLNIDNICRVCLTENANSLSIFCQNETDEKYRDLLNKIQESGGIKITEDDGLPTLICSKCINNINLAFKIRQQCQRSDTLLRLYYKKLKESNLKTIHYQEILQPELITPDISQSSQDLFNYLEIQSMDVEEVVVGQEEVPSVESAGMTDDEPPSYKLKLQLLEIGSTTSSSPITNSPNSRTKAQSKVYPEHLGAFENLAFDPLQLPSDKKYTCSICAQAFETLKILRQHRKIHKDELYVCKICPVRCAKADELAIHLKSHQLTQAAVATIQVNNYDNSKDCNDSDVVNDQQKIDHCNEQLLRDKSPDLNDYTTYRVKKSTIKGLSPDNINTNNNINSNINDTNSPIIHKCEICGQIFSKEKGLMRHRAYHESRVICDICGKVCSNQNWLESHKKLAHSGKIDILIKNIIMTECYLDFDTVCRICLTESTNLTSLYCNDSVPGVFPSLSQRISTCGAIELNERDGLPSLICENCIYKASVAHDFREQCQNSDARLRLCYDKPARLQLSLQDSSTQTEVEERTMAKNVNSNYFVKQEIQGFNQDLNTIGVYQNPQVEVTNNQIVSDDKLFLSVAIETEQQLPNSVTIAEMKPAVTQYVDNDLLVNNDDSVEDEDLEDEEEETEIPADGFNKKQDISIDLHEHKWEEESEELVPSKRLTRKAKDIAGKSYSVDEIDEDLPDNNDDDDDEPKFKCKVCSKRYNTSKGLKNHAQVHDKKHKCPVCLKSFYNLENMEKHVKIHESKPHACQLCHTCFAKPQTLVRHLKSHSDKIQGSNNNSIKSNENGTITIVRTEDTEDDDDDRDGFQTNETDEFDSAPGLYKCSECNQFCSTLKNLKRHSLIHGDKKYSCTVCKKYFFRPDTLKKHAEKHGHGLLDNLSDENKLYESDDETFNRSNTLANNINGNGTNDTDNKKVDSDEDGSGEYKCQHCDKVMATKKGLRRHVSMHKPKAEPVTCEICKKVCASQARLVLHQRTHNKPKEKVPREYLCHICSKVYPSNSSLTYHMRTHTGVKPHVCQTCNSGFTTTTSLANHIRIHTGDKPFVCHVCSAAFAVSSAFRRHLTRHTGEANYLCKTCGKAFKRLSTLKEHTYTHSGEKPYVCKTCGAAYSHSGSLFAHQKRCRVQYGEMVTSENNHSHVPHHIHVNNVQTAVRSLAVIGQMF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-