Basic Information

Insect: Cotesia flavipes
Gene Symbol: -
Assembly: None
Location: scaffold:17801-28640[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2.6 2.6e+02 2.4 1.0 1 19 460 478 460 482 0.90

2 16 0.0093 0.91 10.1 3.3 2 23 493 515 493 515 0.94

3 16 0.96 95 3.7 1.8 1 11 522 532 522 536 0.87

4 16 5.2e-05 0.0051 17.2 0.1 1 23 540 562 540 562 0.98

5 16 2.9e-06 0.00029 21.1 3.4 1 23 568 590 568 590 0.96

6 16 9.2e-05 0.009 16.4 3.3 1 23 599 621 599 621 0.96

7 16 5.4e-07 5.3e-05 23.4 1.0 1 23 627 649 627 649 0.98

8 16 2e-07 1.9e-05 24.8 0.9 1 23 654 676 654 676 0.98

9 16 0.00046 0.045 14.2 1.5 1 23 683 705 683 705 0.98

10 16 2.2e-06 0.00022 21.5 0.6 1 23 724 746 724 746 0.99

11 16 8.1e-07 7.9e-05 22.9 0.5 2 23 754 776 753 776 0.96

12 16 0.0027 0.27 11.7 0.6 1 23 782 804 782 804 0.97

13 16 0.00049 0.048 14.1 3.1 1 23 810 832 810 832 0.98

14 16 1.2e-06 0.00011 22.4 3.1 1 23 838 860 838 860 0.98

15 16 6.3e-07 6.2e-05 23.2 0.7 1 23 866 888 866 888 0.98

16 16 0.08 7.9 7.1 0.5 2 23 895 917 894 917 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2.6	2.6e+02	2.4	1.0	1	19	460	478	460	482	0.90
2	16	0.0093	0.91	10.1	3.3	2	23	493	515	493	515	0.94
3	16	0.96	95	3.7	1.8	1	11	522	532	522	536	0.87
4	16	5.2e-05	0.0051	17.2	0.1	1	23	540	562	540	562	0.98
5	16	2.9e-06	0.00029	21.1	3.4	1	23	568	590	568	590	0.96
6	16	9.2e-05	0.009	16.4	3.3	1	23	599	621	599	621	0.96
7	16	5.4e-07	5.3e-05	23.4	1.0	1	23	627	649	627	649	0.98
8	16	2e-07	1.9e-05	24.8	0.9	1	23	654	676	654	676	0.98
9	16	0.00046	0.045	14.2	1.5	1	23	683	705	683	705	0.98
10	16	2.2e-06	0.00022	21.5	0.6	1	23	724	746	724	746	0.99
11	16	8.1e-07	7.9e-05	22.9	0.5	2	23	754	776	753	776	0.96
12	16	0.0027	0.27	11.7	0.6	1	23	782	804	782	804	0.97
13	16	0.00049	0.048	14.1	3.1	1	23	810	832	810	832	0.98
14	16	1.2e-06	0.00011	22.4	3.1	1	23	838	860	838	860	0.98
15	16	6.3e-07	6.2e-05	23.2	0.7	1	23	866	888	866	888	0.98
16	16	0.08	7.9	7.1	0.5	2	23	895	917	894	917	0.90

Sequence Information

Coding Sequence: ATGATGAAAGTTCTTTGTGCAGTAAGTACATGTAAATATTCATCTAAAACTGAAGATTCAAGTGATATTATTTTTATCAGCTTCCCTAACAATGAAATGTCCACAGTTTGGGCCCACAATTGCGGCAGACCAGATTTATTAATCAAATCAAGAGTAGAGTTGCACAATAATTATTACATATGCTCAAATCACATTGAAGATCGTTACTTCATAAGTAAAACAGAACGCATAATATTAACAGAAGGTGCTGTACCGACATTATTCCATCATCAATTACAATTAAATAATGACTCAGTATCGGATTCACATTACCACGACTTGAAGCAATATACACCTACTACATCGGGGTCAAATGATGATATCATCAACATAATGCAATTAAACAATTGTATCAACGATGTAAACGATTGTTCGTCAACCAATTTTAGAGACACTGTTTATAACAGCGATCTACATCCCACAAGCTGCCATATAAATGAAATTAATAGTAATGTTTCGTCTATTGATAGCGGGAATAGTAATTTAAACAAATACTGCAATATAAATATAAATATTGGGCAGTATGAGGACGGCGGTGATGGTAATGATGACATTGGAGTAAGATACAGCAGTTTATGTAGACTGTGTGGCCAATCAATTAACGATGGTATTGACATACTTTCTGATAAGCAAATAAACTTGAAGACAATTGATAAAATACGTTTATATTTGCCAATATCTATTGATCCTAGTGAGTCAATGCCGCTCAAAATGTGCGCTGATTGCTATGATAAATTAGAAATTTCTCATTCTTTAGTTATTACGTCCTTACAAACTGATATTAGATTAAGAAAATATCTTAATCTTCCTAGTAAGTATAATGATGAAGATAGATATCGTGAATTAATCTCATTATACGAAATAGAAATAAACAATGAAATGTGTATGGATTCAACAGTTCCAATAGTTGATGATTTAGCAGCAATAACAGACAAAGATAAATCTAGTAATATATCTGTAACAGAATTGAATAATCAAGTAACTGAAAATAATTCAACAGCACAAGTAATACAAGTTAATCAAACAGTAATACAATGTCCAAATGACACGTCAACAAAATTAAATGATCGTTTTAAGTATGTACTTCAATCAGATTTAAATAATTTATTATTAGAACCATTAGCATCGCTCGAGTCTGCAAACAATACACCAAATAATCCAGTTGTTGAAAATAATGTTAAAAATTTAATTATGGAAAATGACCAACAGCAATCACAGGAGCAAATAAGTTTATGTAGAAGAAATGATAAATATGATATTGTTGAAAATATATTCGATGGTGAACAAACATTTGAAGACACTAATGCGTTGTATAATAATCAAAATGGTTATCCAGCGTTTAGATGTAAAAAGTGTAAGGATTTATTTAACAAAGAAGAAGATTTATTAATTCATGACTTATATCATACCAGAACAACTTTTCCAGATCAAGAACGCAAATGCGGACATTGTTCATCGTCATTTTTCAATCGTAAGGATCTGCAAAATCATATTTCCGAAAAACATAGCGGACTACAAATGCTATTCAAATGCGGAGTTTGTGACAAAGTTTATGAAAAATGCGGACTACAAATGCTATTCAAATGCGGAGTTTGTGACAAAGTTTATGAAAAATGGTCAAGCCTAGATGTTCATGAGGCTACGCATCGTCAAGATAAACCGTATCTCTGTGATCTTTGTGGTAAAAGTTTTAAGCATTCTAATAATTTAAGAGGACACAAACGTACACATTTAGATGTTGCTAAGAGAAAAAGACACAATTGTGAAATATGTGGAAATGCTTTTAGATCAAGATTTCATTTGAAAGAGCATATAAATCAACATAATGACGATAAACCTTACGAATGTGAGCAATGTGGAAAATCCTTTTCCAAAAGAATCCAATTGCGACAACACCTACTTTCGCATGGTTTAAATAAACACACTTGTCCTATCTGCGGAGTATCATTCAATCGCCGAGCTAATATGAATGCACACATGAAAAGGCACGCTAAAAATGATGGGATGTACACTTGTAGCGTATGTGAAAGCAGATTTAAATCAATGAGCGAGTTAAAATTACATCGAAAAGAGCACACCGAAAATGATATCCTTGAAAGTATTAAAAAAAAATGCAATGATAAAGAAATATACCAGTGTAAAATATGTTCAAGAGCATTTCCAAAACGCTCTGCATTGTTGAATCATGAGCGTACGCACAATGGTACACAGCCGCGAGTTGAATGTGATATATGCGGAAAAAAATTTGCTAACAAAAGTTCATTAAAATACCATACTAAATCAATACATTCAACGGAAAGGCCACACACGTGTCAATTCTGCGATGAAGCGTTCGTTACAAAAGAAGCGCGTCTTGTCCACGAAAGAATACACACTGGCGAACGCCCCTACGTATGTAAAATATGTAATATGCAATATAGATGCTCAAGTAATCTTAGTCAGCATATGAAAGTTCATTCTGAAGTACGACCTCATACATGTCAACAATGTAATAAAAGTTTCACACGTAAAGGCGCATTAACTATTCATGAACGTACTCATACTGGTATTAAACTATTTACCTGCATGATTTGTGATAAAATATTTTCACAAAATTCTAAATTAATTAAACATGTTAAAGTACATCAAGTACATAAAATACTGAGTTGTGAATATTGTAATCAAATATTTTATTCTACGACTGATATTTCTAAGCACTTTGACAGTGTTCATAAAATTTATTCTAATAATACAATCGGTTCTTTGATTAATGATAAACGAATTGTTATAACTGAGAATTTAGAGATATACTCGCTGGATATAAATACTTGCAATATCAAAGAATCTACTGGTGAATTAAATTAA
Protein Sequence: MMKVLCAVSTCKYSSKTEDSSDIIFISFPNNEMSTVWAHNCGRPDLLIKSRVELHNNYYICSNHIEDRYFISKTERIILTEGAVPTLFHHQLQLNNDSVSDSHYHDLKQYTPTTSGSNDDIINIMQLNNCINDVNDCSSTNFRDTVYNSDLHPTSCHINEINSNVSSIDSGNSNLNKYCNININIGQYEDGGDGNDDIGVRYSSLCRLCGQSINDGIDILSDKQINLKTIDKIRLYLPISIDPSESMPLKMCADCYDKLEISHSLVITSLQTDIRLRKYLNLPSKYNDEDRYRELISLYEIEINNEMCMDSTVPIVDDLAAITDKDKSSNISVTELNNQVTENNSTAQVIQVNQTVIQCPNDTSTKLNDRFKYVLQSDLNNLLLEPLASLESANNTPNNPVVENNVKNLIMENDQQQSQEQISLCRRNDKYDIVENIFDGEQTFEDTNALYNNQNGYPAFRCKKCKDLFNKEEDLLIHDLYHTRTTFPDQERKCGHCSSSFFNRKDLQNHISEKHSGLQMLFKCGVCDKVYEKCGLQMLFKCGVCDKVYEKWSSLDVHEATHRQDKPYLCDLCGKSFKHSNNLRGHKRTHLDVAKRKRHNCEICGNAFRSRFHLKEHINQHNDDKPYECEQCGKSFSKRIQLRQHLLSHGLNKHTCPICGVSFNRRANMNAHMKRHAKNDGMYTCSVCESRFKSMSELKLHRKEHTENDILESIKKKCNDKEIYQCKICSRAFPKRSALLNHERTHNGTQPRVECDICGKKFANKSSLKYHTKSIHSTERPHTCQFCDEAFVTKEARLVHERIHTGERPYVCKICNMQYRCSSNLSQHMKVHSEVRPHTCQQCNKSFTRKGALTIHERTHTGIKLFTCMICDKIFSQNSKLIKHVKVHQVHKILSCEYCNQIFYSTTDISKHFDSVHKIYSNNTIGSLINDKRIVITENLEIYSLDINTCNIKESTGELN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00379072;
90% Identity: iTF_00379664;
80% Identity: iTF_00379664;