Basic Information

Insect: Cotesia flavipes
Gene Symbol: -
Assembly: None
Location: scaffold:28377-33411[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0026 0.25 11.8 2.6 1 23 370 392 370 392 0.97

2 17 0.0093 0.91 10.1 0.7 2 23 428 449 427 449 0.97

3 17 5.7e-05 0.0056 17.0 0.8 2 23 516 537 515 537 0.98

4 17 0.00091 0.089 13.3 1.2 2 23 582 603 581 603 0.97

5 17 2.6e-05 0.0025 18.1 0.5 1 23 608 630 608 630 0.96

6 17 0.0021 0.21 12.1 0.3 1 21 636 656 636 660 0.92

7 17 0.00013 0.013 15.9 1.0 2 23 740 761 739 761 0.95

8 17 0.00021 0.02 15.3 0.7 1 20 778 797 778 799 0.94

9 17 0.035 3.4 8.3 0.6 2 23 810 831 810 831 0.97

10 17 2.1e-05 0.0021 18.4 0.6 2 23 869 890 868 890 0.97

11 17 1.9e-05 0.0019 18.5 1.6 1 23 895 917 895 917 0.95

12 17 0.0003 0.029 14.8 2.4 1 23 923 945 923 945 0.98

13 17 5.8e-06 0.00057 20.2 0.4 1 23 962 984 962 984 0.95

14 17 1.1e-06 0.00011 22.5 0.3 1 23 990 1012 990 1012 0.99

15 17 6e-05 0.0059 17.0 0.4 1 23 1018 1040 1018 1040 0.98

16 17 0.00056 0.055 13.9 4.2 1 23 1046 1068 1046 1068 0.96

17 17 0.0078 0.76 10.3 0.4 1 20 1074 1093 1074 1095 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0026	0.25	11.8	2.6	1	23	370	392	370	392	0.97
2	17	0.0093	0.91	10.1	0.7	2	23	428	449	427	449	0.97
3	17	5.7e-05	0.0056	17.0	0.8	2	23	516	537	515	537	0.98
4	17	0.00091	0.089	13.3	1.2	2	23	582	603	581	603	0.97
5	17	2.6e-05	0.0025	18.1	0.5	1	23	608	630	608	630	0.96
6	17	0.0021	0.21	12.1	0.3	1	21	636	656	636	660	0.92
7	17	0.00013	0.013	15.9	1.0	2	23	740	761	739	761	0.95
8	17	0.00021	0.02	15.3	0.7	1	20	778	797	778	799	0.94
9	17	0.035	3.4	8.3	0.6	2	23	810	831	810	831	0.97
10	17	2.1e-05	0.0021	18.4	0.6	2	23	869	890	868	890	0.97
11	17	1.9e-05	0.0019	18.5	1.6	1	23	895	917	895	917	0.95
12	17	0.0003	0.029	14.8	2.4	1	23	923	945	923	945	0.98
13	17	5.8e-06	0.00057	20.2	0.4	1	23	962	984	962	984	0.95
14	17	1.1e-06	0.00011	22.5	0.3	1	23	990	1012	990	1012	0.99
15	17	6e-05	0.0059	17.0	0.4	1	23	1018	1040	1018	1040	0.98
16	17	0.00056	0.055	13.9	4.2	1	23	1046	1068	1046	1068	0.96
17	17	0.0078	0.76	10.3	0.4	1	20	1074	1093	1074	1095	0.89

Sequence Information

Coding Sequence: CCGTATCCTCCAAACCTAAACATGGACGGCGTTAATATTGATGATAGCAATCAAGTGTCTCACAATGAGGATGATAATGTCGAAGCAAGTGTGGAAATTTGCCGGGTTTGTCTCCTCAGCAATCACTTGATGAGAGATTTATTCATTGAGAATGATGTTGTATCTTTATCAACTAAAGCCATGAGCTTCGCTAACGTTAAGGTTAGTTCATTTTTATTTCTTGAATCATCAATTTTATTATTTCTTATTTCGCTACTGTTTACTTATGTGCATAAATTTGAACAAGCGGACAGCTTGCTTCGAGAAAAATACGACAGTTTGAATATAAAGGAAGAGTTATTTTTTAATGAAGTTGAGGTACGCTTGGAGAATGAAAGACATGATGATGTGACAGGTATGGTCGGCGAGCATTATAATGTTACAAACACCGTATCTGATGATAAATCGTCATTATTAAAAGATCATTTGGCATTATTACAAGTCGAAAAACTCACCCATCAGCACGAACAATATTTAGAAGATGAAGTTATGAAAGATCAAATAATGCAATCCGAGGAGCAATACATCGAAGACGAGCACACTAATGAACAAATGATCACCGAAGCTATTGAATCATCGGCGAATGACAATATCAAGCCTGCAGCAATAATGCATGACCAAGATACTATTACTGTTGGGGAGCATAATTACATAGTTCAACATCCGGATTACACATTGTCTAGTGAGCAAGATCATGAGTTGATAAATGCCGACAATGTCAACGAACACGACGCGAATGAATATTTATCAATGATTGGCGATGAGGAGAGATTACTCAAAGAAACTGAAACCCATTTAGAGAATGTTATTGATGACAATAAAAATAATGGATATATTAACGACAACGAACACGTTGATGATGATGATATTGATGATAATAATGAATTGAATCAAACTGACGATGGAATTGAAATGCAAGAAAATGAGTGCAATAAAATTTCAACGTGTACTGATGAAATTGATTCTTCAGATCAAGTATTAGATGATGAAAATTATTTTGAAAATCTTGATCTGAGCAGTAGGTTATCACAAACTCAGTCAACTGATAAACTTGACAAAAAAATTTTTTTTATGTGTCACATTTGTGACGAAGAATTTTTGTCCAAGGATTTATTAAAGGAGCATTTACATTCACATGAAGAAGTTAAACAGAGATTGTTGATGAAAAAAACACCGGAAAAAGTAACGCAGAAAAATGTTTCACCGATAAAATCACAACCACCGTCTGGTAAAAAGCCAAATAAATGTCCATATTGTGGTAAAGAATATTTGTACGTTATTTCATTTAAAAAACATATCAAGCAGCATCAGAAAAATGATGATGAGTTAAAAGAAGGAAATAATGACTCAATGTACCGGGATGATAACTCTGCAGATTCTAATAATTTTGATAATAACGACACTTTCGAAGTTATTGCTGACGATAAACAAAATATGGAAGAGTATAATGATAATGATAATTATAATGAACTTTCAAATCATCATGGCTATCAAGTTGATAAACAAAAGTGTAACATTTGTGGGTTGGAATTTGATTCACTTGATAAATTAAAAAATCATCGTTCGACTCATGTTATTGAAGGTGTAATATCAGAACAGGATTTGAAAGATGAACTTTCCAGTATGTGTCAAAAAGAGTATGATCAAGAGAGAATAATGGATAATAATATATTGATGGAATCGAAAAAAGAAGGTAATGAACTCAAGTGCCCTACTTGCTTTTTATTATTCAGCAGTAAAAAATTATTATCAAAACATTTGGAGACACATGAAGGCGTCAGGTATCGTTGTAAAATATGTGGTGACGAATTTACTCAAAAAGACGATCTTCGTAAGCACGCTGAGCAACATTTAGAAGTAAAAACATTTCAATGTATGCAGTGTAACAAGATATTTGTTAATGAATTGACGCTGAGAAATCATTTAATAGCAACTAATCACAAGACAACAGTCCACGGTGAAGAGTATGATCCAAATAAGAGAATTAAAAGAGTAGCAGCGCGCGCGGCACAAAAAATAATTGATAAAATTAGTACTGAGGATAATCTTGATGACTCGGAGAGAGACGATGACGATGATGACAACGATGATTTTATTGTGAAGACTGACGTTGCTTTAGGTCTCAAGGCCGCCGATAAATTGCAGTCCAAAAAACAGAGTAGTAAAAATAAAAATCTTGAGTGTGAAACGTGCGGTAAGAGATGTATTTCTAAACAAGCTTTGGCTAAGCACATGGATTATCATATGAGAACACAAAAACCTGAACACCAACTTTTGCACGAAGAACCCAATTTTGAGTGTGATATTTGTAATGTTAAATTTTATCGTAAAGATAAGTTGAAAGCTCATTACGATAAATGTTCTGAAAAAAATCCAAATCAAGTGAGAAAGTGTAATATTTGTGGGGATACTTTTGAGAATAATGAAATATTGCGTGAACATAGATCAAAACATGTTGACGAAGGGATACTAACCGAGGAAGACTTGAAAGATTTGGAGCCAGGCTCTGAAGATAGGAAGGGTGAAAAAATAGCCCGAAAAAGACGCACTGATATCGTTGGTCTAGAGTGCACTGAATGCAATAAACAGTATACTTCACGTAAAGGTCTTTTGAGACACATACAAGTTCACGAAGGTAAAAAATATCTTTGTGATATATGTCCAAAGAAATTTTATCGTCGTGAGCATTTGAAGATTCACGTTGCTAAACATAATATGATAAAACCATATAAGTGTACACGTTGCTCGAAACGTTTTATGAAAGAGGAGCAGCTTAATGCACATTTGACTAAACACGAGAGAACTTTTAAGAAAAATAAAGAGCCAGATAGTACATCAAAAAGATTCCTTTGTGAAATTTGTTCAAAGAGTTTTACTCAGTCAACAACTTTGGTCGCTCATTTGCGTGCTCACAATGGTATTAAACCTTATGTGTGTGAAGTATGTGCAAGACCGTTTACTACAAATGCGTATTTAAAAATGCACATGAGAACTCATACTCAAGAACGGCCGTATACGTGTCAATTTTGTTCACGTGCTTTTGCAAGAGCTGACACGCTGGCTAATCACTTGACTTCGCATACTGGCGAAGCTAAATATCATTGCAAATTTTGTCCGAAAAATTTCCGCCGACTCAAATCTCTAAAAGAACATGTGTTCATTCATACAGGACAACGGCCGTATGCATGTCCGACATGCGACCGGAGATTTAACAACAATGGAAGTCGATATGCTCACAGTAAAAGATGTAAACAAAATATGCTTCAAAATCAAGCTAGACAAAGTCAAGCGCAGACTTCCCAGACACCTCCAGGTCCAACACCGGTGCAAATAGCACCAGCACCATTACCTGCATCACTACCGCCTCCACCACCACCACCGGCACCACAAGCTGCTACTATCAGGCTAGCGCATCCAGTTACTCAGGCAATGCAAGTTGTTCAATCGAAAAACGTCAAAACAATAACTATTGCAAGACCTGACCAAGTTGGTACTCATCAAATTCTGCAACACCAAGAAATATTAATGCCACTTATTTTACCTCTCACTGTTACACTTACTGATTGCGACGAAGAAGTTATATTACCAGAGGGCACCAAGATATTTACCACTACGTAG
Protein Sequence: PYPPNLNMDGVNIDDSNQVSHNEDDNVEASVEICRVCLLSNHLMRDLFIENDVVSLSTKAMSFANVKVSSFLFLESSILLFLISLLFTYVHKFEQADSLLREKYDSLNIKEELFFNEVEVRLENERHDDVTGMVGEHYNVTNTVSDDKSSLLKDHLALLQVEKLTHQHEQYLEDEVMKDQIMQSEEQYIEDEHTNEQMITEAIESSANDNIKPAAIMHDQDTITVGEHNYIVQHPDYTLSSEQDHELINADNVNEHDANEYLSMIGDEERLLKETETHLENVIDDNKNNGYINDNEHVDDDDIDDNNELNQTDDGIEMQENECNKISTCTDEIDSSDQVLDDENYFENLDLSSRLSQTQSTDKLDKKIFFMCHICDEEFLSKDLLKEHLHSHEEVKQRLLMKKTPEKVTQKNVSPIKSQPPSGKKPNKCPYCGKEYLYVISFKKHIKQHQKNDDELKEGNNDSMYRDDNSADSNNFDNNDTFEVIADDKQNMEEYNDNDNYNELSNHHGYQVDKQKCNICGLEFDSLDKLKNHRSTHVIEGVISEQDLKDELSSMCQKEYDQERIMDNNILMESKKEGNELKCPTCFLLFSSKKLLSKHLETHEGVRYRCKICGDEFTQKDDLRKHAEQHLEVKTFQCMQCNKIFVNELTLRNHLIATNHKTTVHGEEYDPNKRIKRVAARAAQKIIDKISTEDNLDDSERDDDDDDNDDFIVKTDVALGLKAADKLQSKKQSSKNKNLECETCGKRCISKQALAKHMDYHMRTQKPEHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPNQVRKCNICGDTFENNEILREHRSKHVDEGILTEEDLKDLEPGSEDRKGEKIARKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCSKRFMKEEQLNAHLTKHERTFKKNKEPDSTSKRFLCEICSKSFTQSTTLVAHLRAHNGIKPYVCEVCARPFTTNAYLKMHMRTHTQERPYTCQFCSRAFARADTLANHLTSHTGEAKYHCKFCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNMLQNQARQSQAQTSQTPPGPTPVQIAPAPLPASLPPPPPPPAPQAATIRLAHPVTQAMQVVQSKNVKTITIARPDQVGTHQILQHQEILMPLILPLTVTLTDCDEEVILPEGTKIFTTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00382050;
90% Identity: iTF_00381301;
80% Identity: -