Basic Information

Gene Symbol
CSRNP3_1
Assembly
None
Location
scaffold:9655-14950[-]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.61 1.1e+04 -4.0 2.9 78 103 197 222 123 248 0.58
2 6 0.2 3.5e+03 -2.4 0.6 54 90 231 267 197 294 0.56
3 6 0.14 2.4e+03 -1.8 2.9 49 98 430 465 414 472 0.31
4 6 6.9e-51 1.2e-46 159.3 0.0 2 144 475 610 474 616 0.87
5 6 2.7e-14 4.7e-10 39.7 0.2 174 205 618 649 612 662 0.89
6 6 0.017 3e+02 1.1 5.3 37 79 749 792 737 843 0.49

Sequence Information

Coding Sequence
ATGAAAACACCGGGGATAATTGAAACAAGTAGTATGAAAAATGAGGCCCAAGAGGAATCTAACTCATCGGACACTGCTACAAACACCGCAGTTCCGTTTAATCAATTACAATTATTTAGTAATGATAGTGAAAATATATCAATAGATAATAATAATTTATTAATGAATAAAAATACATCTGCGGGTGAATGTACACAACCATTGACATCAATTGATCAAGTAAAAGAAGTAATAACAAGTGAAGAAAATAAAGAAGACAAAAATGAAGAAATAAAAATTTTAGATTTTAAAGAATTAAATAGTGTTGATTCAACAGATGAATTCGTGCCTATTAATAATATTGATAAGACAGTAGTCGGTCTTGAGATATCAGATGAGGAAGCCAAACAATTGAAGCATGATGTACAAACAATTAATCAAAAAGAATTAATGGTTGTATTGTCACGTGTTGACGAAAATAATGAATTTAAAATAAATGATGAATGTGGTGAAATAATTAAATCTCAACAGATTATTAAAAATAATTCAACAAGTATTAGTAATAATAAAAATAATAGTTGTTGTAATGATAGTGACAATGAATTAAATAATTCGTTTGATATGTCATCAGAGTATTCAAAAAACGATGGCTTGAAAATAAATCAACGGCTTGAAGATGAATTTGATCAATTGGAGCAAAAAGAAAATCCAGTGGAAGTAATTACTGAATCAAAAATTATTGAAAAAGAAAGGGAAGAAAGAATTGAATCAGTTGAGTTGGAATTAATTTCTATGGCGACAACGGATACTATTCAGAATTCGGTTACTGAATTGGGTGTTGGTGAATTGGAGCCTGATAGACAAGAATTAAAAAATGAAACTCAATTCAATAGTATTCAAATTGATGTTGATGATAATCTTGATGTTGATGTTGATGGATTAACCTGCGATGAACCTTCATCGTTGACCAGGCTTACGTCGATCATCCAAGAACCCGAGGAAGATTCTGCGGAAAGCTTGGCGCTCAATACTGGAGCTGCTGGGGACGAAGTTAGATCAGATGGAAGCGATTCAGGCTTAGGGAGTGAAATTCCTGGTGATCCTGGAATTCAACCAGCACCTGAAAGTGACTCGGAGACGTCTTTTCTTGATAGAATTCCAGAAGATATTCTTGGAGATAAAGAGAAGGAAATAAATCTACTTAAAAATTCGATATCAGTAGATGAAAATAGCGAGGCTTCATTGACATTACTACCGTTGCCAACTATTGGTACTCTACAAAAAAGTAATTTAAAACGACGAATGTCTGAATATGCGAAAGGTGAACAACCATTCGCTAAGAGAAGTAATAACATTAAAGATAAAGATGACCATCATAACCAAGAGCAGCAGCAGCACCAAGAGTATCAAGAACAGCAAGATGAAAAACAACCGATTATAGCAAAAAAACGCAACATACATTTTGATGCTGTAACAGTTTATTATTTTCCACGAGCTCAAGGTTTTACTTGTGTTCCATCTCAGGGTGGTAGCACGCTGGGTATGAGTGCAACTCACACACATGCTGAGAGATTTTCACTAACAGAACATGCTGCCGAACAGAGAAGACTTCATCGAGCGCGATTAGCTCAATTAAGATCTGAAAGAGCGGCTACTTGTATCGCTGAGGCTGCGTCAAGTTCCGAGGACCCAAGCGATGACACCGACGAAGAGCCCAGTGACACCGAGGATCTTGATATTGATAGTTATTATTTTCTTCAACCGGTACCAACTTGGCAGAGACGAGCTTTGTTACGTGCTGCTGGTGTACGCAGAATAGATGGTATTGAAAAAGACGATTGTCGTGATATTCTAGAGAACATTGCGGCTGTGGCTGTTGATCGTGCTGGTTTTCCATGTGGTTGTTCACGTGACGGCTGTGCTAATAGTTCAGGTCGCATAGAATTTAATCCAATCCAAATTTCTACTGGCTTAACAACTCTGCATTACAGCAGCAATGTTGATACATTAGATTCAACAAAAATAAAAAAACCAACAACACCTCCACCACTGCCATCATCTGGAATCTTGTCATTACAGTCAACGCGTGAAAATAATCTTGATTTGTATGGCGTGCGGGATAATTGCTATTCAAATGAAGATATTGCTAATACGTGTAATAAAATTCCGCAAGAATTTAATCAAGTTTTTCAGAGTTTTACTGGACCAAATTTTCAATCTAACTATGAAAATTATTCAAGTTATGATTTAGGACCATCAACATCGCGGCATCATCAAAATAATTACCATTATTATCAGCATCAGCATCAGCAACAAGAGCAACAGTTGCAAAATCATGAAAATAAATTAAAACAGCAGCAACAACAAAAACCACAATTTATCCAGCAATTCCAACAAGCGTTTAATCATTATAATAATTACCAAGATTCTTCAACAGCAGCATCAGCTTCTGGAGCAGCTGATGTTTCCGCTGGACCGTCAATCTCTTGTGAGGCAATTCAAAAAAATAGCCAAGCTAAAATTTATCAGCAATCTTCAACAGAGGATAATCCTCCTCTGCAGTACACTAATTTAAATTCAGTAAGACAATCAACGAGTGCTGGACAGCACATGGGAAAACTTGAGCCTTTTTCAGACTTGTTAGCCGGGCGGTACTCTTATTACGACCAAGCCGAGTCCCATTCTTTGAGTAATTATCAGCTGGTTAATTCTGTTAAGGATGTAAAAGTGTCATTAATTACTAATCGATAA
Protein Sequence
MKTPGIIETSSMKNEAQEESNSSDTATNTAVPFNQLQLFSNDSENISIDNNNLLMNKNTSAGECTQPLTSIDQVKEVITSEENKEDKNEEIKILDFKELNSVDSTDEFVPINNIDKTVVGLEISDEEAKQLKHDVQTINQKELMVVLSRVDENNEFKINDECGEIIKSQQIIKNNSTSISNNKNNSCCNDSDNELNNSFDMSSEYSKNDGLKINQRLEDEFDQLEQKENPVEVITESKIIEKEREERIESVELELISMATTDTIQNSVTELGVGELEPDRQELKNETQFNSIQIDVDDNLDVDVDGLTCDEPSSLTRLTSIIQEPEEDSAESLALNTGAAGDEVRSDGSDSGLGSEIPGDPGIQPAPESDSETSFLDRIPEDILGDKEKEINLLKNSISVDENSEASLTLLPLPTIGTLQKSNLKRRMSEYAKGEQPFAKRSNNIKDKDDHHNQEQQQHQEYQEQQDEKQPIIAKKRNIHFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLTEHAAEQRRLHRARLAQLRSERAATCIAEAASSSEDPSDDTDEEPSDTEDLDIDSYYFLQPVPTWQRRALLRAAGVRRIDGIEKDDCRDILENIAAVAVDRAGFPCGCSRDGCANSSGRIEFNPIQISTGLTTLHYSSNVDTLDSTKIKKPTTPPPLPSSGILSLQSTRENNLDLYGVRDNCYSNEDIANTCNKIPQEFNQVFQSFTGPNFQSNYENYSSYDLGPSTSRHHQNNYHYYQHQHQQQEQQLQNHENKLKQQQQQKPQFIQQFQQAFNHYNNYQDSSTAASASGAADVSAGPSISCEAIQKNSQAKIYQQSSTEDNPPLQYTNLNSVRQSTSAGQHMGKLEPFSDLLAGRYSYYDQAESHSLSNYQLVNSVKDVKVSLITNR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00381832;
90% Identity
-
80% Identity
-