Cfla014284.1
Basic Information
- Insect
- Cotesia flavipes
- Gene Symbol
- kn
- Assembly
- None
- Location
- scaffold:6932-11017[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-89 1e-85 288.2 0.1 250 445 19 207 12 228 0.89 2 2 0.023 2e+02 -0.0 0.1 544 560 228 244 205 256 0.68
Sequence Information
- Coding Sequence
- ATGATTTATGATATTGTATGTTATATACCAGGTTTATACCCAGCGTTACCATTGCAAACTCCCTGTATAAAAGCAATATCTCCGAGTGAAGGTTGGACTTCAGGTGGATCAACGGTAATCATAATCGGCGAACATTTCTTCGACGGCTTACAAGTGGTCTTTGGATCTATGCTAGTTTGGAGTGAGCTAATAACGGACCATGCTATAAAAGTTCAAACGCCACCACGGCAAACTCCTGGTGTGGTCGAAGTGACGTTGTCGTATAAAAGTAAACAATTTTGTAAAGGTTCGCCTGGACGATTTAATTATGTTTCGCTAAATGAGCCAACCATAGCATACGGATTCGATAGACTGCAAAAATTAATTCCAAGACACCCGGGAGATCCCGAAAAATTGCCAAAAGAAATAATCCTTAAACGAGCTGCTGATTTGGCGGAAGCTCTGTACAACATGCCGAGAACAACAACAACAGGTAATTCAGGAATCAGTGGTGGGGCGCCAAGAAGTCCAGGGTCAAACCATGTACCTGTACCGCCGACATCGAGCTCTGCCAATACATCTTTTAATTCTTATACAGGTCAATTGGCAGTCACTGTACAACAGCAAGAAAATGGTAGTAGCAGTACAGCAAAATGGACCGACGCGCACGAACAATATGGAATTTTCTATTCGTCTGGTGATGTAGGAGGTGGGAGTGCATTTGCCCCCGTAGTCAGACAACCAGCCACAACTGTTTCAGTTTCATCACCACATTGGTCCACACAACACCACCTTGCCACAGCTGCTCAGTAA
- Protein Sequence
- MIYDIVCYIPGLYPALPLQTPCIKAISPSEGWTSGGSTVIIIGEHFFDGLQVVFGSMLVWSELITDHAIKVQTPPRQTPGVVEVTLSYKSKQFCKGSPGRFNYVSLNEPTIAYGFDRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYNMPRTTTTGNSGISGGAPRSPGSNHVPVPPTSSSANTSFNSYTGQLAVTVQQQENGSSSTAKWTDAHEQYGIFYSSGDVGGGSAFAPVVRQPATTVSVSSPHWSTQHHLATAAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00379380;
- 90% Identity
- iTF_00379380;
- 80% Identity
- iTF_00379380;